Xiphophorus maculatus (southern platyfish): 102218718
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Entry
102218718 CDS
T02923
Symbol
spidr
Name
(RefSeq) DNA repair-scaffolding protein isoform X2
KO
K22806
DNA repair-scaffolding protein
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xma03400
]
102218718 (spidr)
DNA repair and recombination proteins [BR:
xma03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
102218718 (spidr)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4503
DUF4502
Motif
Other DBs
NCBI-GeneID:
102218718
NCBI-ProteinID:
XP_014327418
UniProt:
M4AXB0
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Position
6:17199832..17243845
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AA seq
930 aa
AA seq
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MSSRKRKRLSKDIKCLLFPADAVESGPQKRERETTSLLSSRSWATCGDSFLGTATLQSGK
KLSVKRKLAQNPAIVQSSAPSHDEDPVDIAWSSSETEPSDDESQVQRKSKVALQQRPRPP
MPRRPNALIQSYTTALSMLTNEKDDLPVIETDSDLDQSEEDDEKDSGQQISDCGSESADE
NTNVCPLDSEHMKELEISGYVSDGDDLGCTLTSSKLDSDVFSLQSGEGSKRSVRDWLRSA
QAMLQTPQKPMDRQFKTPEDSTKKKRKFKSGGLAERLNRLQCRQRSAISFWRHKSISDTS
VAAATTVDRPGVLVLEVLEVHEESSMQMAHCEHQQPPRDGQQQKNGVSEETTPMLVLFNR
ETAAQLIPAPGDVIHIYPPWQSLSIEGLICPVILNTHFSQKVSSASKPDDMSLPKIWLSA
ERRLPYFLGQIFGLLNECKTKSEGRAKQVAVSDVLCTFGTRPCLSLLEAIEGLGQAGNVD
VVVQRVYSIPMADCSPVSFLKHRASLRSSTAPPPAEKGKTRLCVLVQDSFGIFSVVRLQP
LSSKDELHQYCQMWQGRTCVLTGVKVVQRVTRERHSRLFSLIDSLWPPATSLKDHGNSLS
MLNEISSPGPPPSFCYLLSGHRRSVEPREGQTVSPLYLHPASRTLRDILHSEAKSCCCSF
IATVLYKRMQSTDVGRGEVWLVLTDPSLQEEQPERPCRRTVALCVSTSCVLTSSVLEALN
SPAVCEMSFRDAIREHGVLLCAEQSVIEVYSVQPKSSFETTTRQDSLSSSEPQVKTLPQP
LRLDSLSLETAPNSLCSLTGVIIGVNENASYSWPACNLCGSDNLEVSAEKPQNFHCISCK
SALDKPDTKVQLEVFLSSSSLSNCTLKVKLQQKTIMSILNTPVLESSELQGYDVESVLGK
EVGPMAVYVRVVTRKPAQWMGLEEICLQAC
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctaggaagcgtaaaagactctccaaagacataaagtgtcttttgtttccggcg
gatgctgttgaaagtggtcctcaaaaaagggagagggaaactacatcacttctatcctcc
agaagttgggcaacatgcggggacagttttttgggcaccgcgactcttcagtcaggaaaa
aagctgtctgtcaaaaggaagttggctcagaatcctgctatagtgcagagcagtgctccc
agccatgatgaggacccggtggatatcgcctggagttccagtgaaactgaaccgtctgat
gatgagagtcaggtgcagcgtaagtccaaagttgctttgcaacagaggccgcgacctcca
atgccaagaagacctaatgctctgattcagtcttacactactgctctgagcatgctcact
aatgagaaagatgatcttcctgttatagaaacagacagcgatctggatcagtccgaggaa
gatgatgaaaaggacagcgggcagcaaatttcagactgtgggtcggagtctgctgatgaa
aacacaaatgtttgtcctctcgattctgaacatatgaaagagctagagatctcaggttat
gtgtctgatggagatgatcttggctgcacgctgacatctagcaaactggactccgacgtc
ttttctctccaatctggagagggcagcaaaaggtctgtccgtgactggctgagatctgcg
caggcaatgctgcagacacctcaaaaaccaatggacaggcagttcaaaacacctgaagac
tctaccaaaaagaaaagaaagtttaaaagtggaggtctggcagagaggctgaaccgactt
cagtgcaggcagaggtcagctatcagtttctggaggcacaagtccatctctgacacatca
gtagcagcagccacaacagtggaccggcctggtgtgctggtgctggaggtgctggaggtc
catgaggagtccagcatgcaaatggcgcactgcgagcaccagcagccccccagagacggc
cagcagcagaaaaacggcgtctccgaggaaaccactccgatgttggtgttgttcaacaga
gaaacggcagctcagctgattcctgcacctggagatgtcatccacatatacccaccttgg
caaagtctgtctatagagggcctcatctgtcctgtaatcctgaacactcacttcagccag
aaagtgtcatctgcttccaaaccagatgatatgtccttaccaaagatctggctgtctgcg
gagaggcgcttgccttattttttgggtcaaatttttggactgctcaatgaatgcaagacc
aaaagtgaaggcagagcaaagcaggttgcagtatctgatgttctctgcacttttggaaca
agaccctgtctctctctcttggaggccattgaaggacttggccaggcaggcaatgtggat
gtggttgtccaaagagtttactccatcccaatggcagactgttcccctgtgtcctttctc
aaacacagagcatcccttcggtcctccactgctcctcctcctgcagagaaaggaaaaacc
aggttatgtgttctagtccaggatagcttcgggattttcagcgttgtcagactccagcct
ctgtccagcaaagacgagctccaccagtactgccagatgtggcaggggagaacctgtgtg
cttacgggcgttaaagtggtgcagcgggtcactcgagaaaggcactccaggcttttcagc
ttgatagacagtctgtggcccccagcaacgtctctgaaagatcatggaaactcgcttagt
atgctaaatgaaatcagctctccaggtccacctccaagtttctgctacctgctgtcgggt
catcggagatcagtagagcccagagaagggcaaaccgtttcaccactctaccttcaccca
gcaagccggaccctacgagacatactgcatagtgaggccaaatcctgttgctgcagtttt
attgccacggttttatacaaaagaatgcagagcactgatgtaggccgtggggaggtgtgg
ttggtgctgacagaccccagtcttcaggaggagcagcccgagaggccatgcaggcgaaca
gtggctctgtgtgtgagcacttcctgtgtgctcacttcctctgtcctcgaagcactgaat
tcccctgccgtctgtgaaatgtcgttcagagatgccatcagagaacatggtgtgctcctc
tgtgcggagcagtctgtcattgaagtgtattcagtacaacccaagagtagttttgagacc
accacaaggcaagactcactttccagctctgagccccaggtgaagactctgcctcagcct
ctgagactggattccctgagtttggagaccgcacccaactccctctgtagtctcacaggg
gtgataattggtgtaaatgagaatgcatcttattcttggccagcttgcaatctttgtgga
agtgacaacttagaggtgtcagcagaaaagcctcaaaacttccactgcatttcctgtaaa
tcggcgttggacaagccggacacaaaggttcaactggaggtcttcctcagctcctcctca
ttgagcaactgcaccttaaaagttaagctgcagcaaaagacgatcatgtcgatcctgaac
acgcccgtgctggaaagcagcgagctccaagggtacgatgtggagagcgtcttgggaaaa
gaggtgggtcccatggccgtttatgtccgagtcgtcacaaggaagcctgcccagtggatg
ggcctggaagagatctgcctccaagcctgctga
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