Xiphophorus maculatus (southern platyfish): 102219807
Help
Entry
102219807 CDS
T02923
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2D-like isoform X1
KO
K05212
glutamate receptor ionotropic, NMDA 2D
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04020
Calcium signaling pathway
xma04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
102219807
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
102219807
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xma04040
]
102219807
Ion channels [BR:
xma04040
]
Ligand-gated channels
Glutamate (ionotropic)
102219807
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
102219807
NCBI-ProteinID:
XP_023186690
LinkDB
All DBs
Position
3:19308543..19397026
Genome browser
AA seq
1957 aa
AA seq
DB search
MVAIPTLSLLLVLAEWAGLVDASPHLLLRPSPRERDAGAVMNFNIAVIHAGATVQAEAAV
AGPGGRVLYPGFGRVYGSLGESVVTQWGSANVIWLQVNDSSPKTVLSQLCELLAARPLQG
LVYEEERPPPTAWGPLAPMLEFVSAQTGLPIVAVGGGAGLGRMPQESGSIFLQFSSSTAL
QLEVIFEVLEEYDWTAFSVVSTRHHGYQDFLSVVEGLTDGSFIGWEKKSVVILNVTDDPG
GARTRRLLKENEAQVRLLYCSQEEAELVFRAAWAAGQAGASHMWFAVGPALSGLGMESLP
RALFAVRPQGWRDEPRRRIARGVSVLTHGAVAMRKEYGSTGGPNFVTTCMTDANQTQRLR
SRMRYFSNITLGGRDYSFNSDGYLANPFLDVISWTPGRGWEDVGWWENGVLRLRYPAWSR
YGPFLKPPDDAQHLRVVTLEERPFVIVELADPSSGTCIRDSVPCRRPLNASAIHEGVAPL
KQCCKGFCIDILKRLAKIVGFTYDLYLVTNGKHGKKIDGVWNGMIGEVVYKRADMAIGSL
TINEERSEVVDFSVPFVETGISVMVSRSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVT
VFIFEFFSPVGYNRSLHSGKKAGGSTFTIGKSVWLLWAIVFNNSVPVENPRGTTSKIMVL
IWAFFAVIFLASYTANLAAFMIQEEYIDTVSGLSDKKFQHPEEQYPPLKFGTVPNGSTEK
NIRSNYPDMHQYMGKYNQRGVEDAILNLKTGKLDAFIYDAAVLNYMARKDEGCKVMTIGS
GKVFATTGYGIALHKNSRWKRPLDLALLQLVGDDEIEMLERLWLSGICHNDKIEVMSSKL
DIDNMAGVFYMLLVAMGLSLLVFAWEHLVYWKLRHCMATSSGKLDFLLAISRGMYSCCSF
EDETAPGGSKSLPSHHHTAMVTVPSQPHVVSTTVTNPAIAMAQQQQQPQQQQPPPVYKTP
LPGSPPTVVHSGSALGSSNPPIAGAPLPCSTFLPRPDRRLAVVDRWRLPKTATATNPMAV
RGGITDMGPFAQKVPQNWATAAGGGGGLDGYKRYYGPIDPEGLGSCMDQQAGSQTPKTMP
RGHPQPPPASVAFYSEKSMDHGVGKKVVGGGGGGQGKGPVKPLGTPRLPPKSQAPLPPTP
PLPHPSPPLPSSFWRKRRPKKPKEPGGPLYENILPLGRRGGARDGMREGGGRRTRPLSPP
LSLPIPVPLSPSYTPPSPSASLHYMSSSSTSTTSSTSTSSSASSSRSTSPTYSYSSSRST
RDRTGGIDGEDDDDDEDLTEESSLLLGRGRERERSIIRPRSLSHGRLPPPIPPRKPRTSW
GDRERERERERGGSQLSQLQEWWASWSERERRGTGGETERLKREKKRRKEKEKEKKKKKK
NKKRKKREERERERERERKRRKEKKKKKKALKTKKRKKSTGGKRSEPEEGDVEQEREGEA
ERERDEGIQDYSSFSAQYGSTFGEKGRDSWEGDRERGRGEDGNDRDEEDSGRSRERRPKS
SHSHRRRTPNKRYSNSNKFPTSVKFWMNGRGDNSNTTPVSLHPLLPSSKRRKSGGIDRED
SGRVGERRPLLMHYEKEKAQTREGLSFHEWDSDDNDDDDEDDDDDEEERDRVRERGEDRG
RRVGRGAVSESERDRGRVEDSYSDEGSSGEFGRFERYWEESAGGTGTGIGGIGGGGWFFG
TYPSREKGGSINSRDDSLLGTRAEGWIGADFWGSGPGIGWASGGGSGGLGSQWPPPPTAF
PPPRRYWSMDKIPVKGEKKWKGGGGKRKGRSRERLDEGGRSTLCSCSLFPQPHPYPHPHG
RSQTSNSKRRASALSHSQEELLPHCHSFSGGSRPKPLPPKPDSSQAKSGSQSNLSLNTQP
TDHQPQPSPSPPQQPSLSPTSLPMPIVPPSSSASVSPPAGVGMAGPAQASASAKLQYQRL
RSVPQPRRFYSPHLPLKAKSLCSRRGSAHFSSLESEV
NT seq
5874 nt
NT seq
+upstream
nt +downstream
nt
atggtcgccatacctactctctctctcctattggtcctggcagagtgggcaggtctggtg
gacgcatccccccacctcctgctccggccgagcccgcgggagcgtgatgcaggggccgtg
atgaacttcaacattgccgtgatccacgccggtgccacggtgcaggcggaggcagcggtg
gcggggccggggggaagggtgctctaccccggcttcggacgggtatacggctccctgggg
gagagcgtggtcacccagtggggctctgctaacgtcatctggcttcaggtgaatgacagc
agccctaagacggtgctgtcccagctgtgtgagttgttagcggcgaggcccctgcagggt
ctggtttacgaagaggagaggccccctccgacggcttggggtcccttggcccccatgctg
gagtttgtctctgcacaaacaggactgcctatagtggctgtaggcgggggagcagggctg
gggaggatgccacaggaatcaggttccatctttctccagttcagctcttccactgcgctc
cagttagaggtcatcttcgaggtgctggaggagtacgactggaccgccttttctgtggtg
tccacgcgtcaccatggctaccaggacttcctttccgtggtggagggactgacggacggc
tcgttcatcggatgggagaagaagagtgttgttatcctgaacgtgaccgacgatcctggg
ggtgcacgcacgcgtaggctgctgaaggagaacgaggcgcaggtccgcctgctgtactgc
tctcaggaggaggctgagctggtcttccgtgccgcctgggccgctggtcaggccggggcc
tcgcacatgtggttcgccgtgggccccgctctctcgggtctgggcatggagagcttgcct
cgggcgctattcgccgttcggccccagggttggagggacgagcctcgccgaaggatcgct
cggggtgtgtctgtgctcactcacggagcggtggcaatgcgcaaggaatatggaagcacg
ggcgggccaaactttgtcaccacatgcatgacagatgccaatcagacccagaggctgcga
agcaggatgaggtatttcagcaacataacgcttggtggtcgagactattccttcaatagc
gacggttacctggccaaccctttcttggacgtcatctcttggacacctggaagaggctgg
gaagatgtaggctggtgggagaacggcgtgctgagacttcgatacccagcttggtcccgc
tacgggcccttcctgaagccgcctgacgatgcccagcacctgcgggttgtaacactggag
gaaaggccatttgtcattgtagagcttgcagacccttcttcaggaacctgcatccgggac
tctgttccctgcagacgtcctctcaatgccagtgcgatccatgagggtgtggctcctctg
aagcagtgctgcaagggtttctgcattgacatcctcaagcgacttgcaaagattgtcggc
ttcacctacgacctctacttggtgaccaatgggaagcatgggaagaaaattgatggcgtt
tggaacggcatgattggagaggtggtgtacaagcgggcggacatggccatcggctcgctg
actatcaatgaggagaggtccgaggtcgtggatttttctgtaccattcgtggagacaggg
atcagtgtcatggtctcccgtagcaatggcactgtttcaccatcagcttttttagagcct
tatagtccagcagtgtgggtgatgatgttcgtcatgtgcctcactgttgtagctgtgacc
gtctttatttttgaattcttcagccctgtgggctacaaccgcagtctgcattcaggaaag
aaggcaggagggtccactttcaccatcggaaaatctgtctggcttttatgggccattgtc
ttcaacaattctgtgccggtggagaacccgagaggaaccacgagcaagatcatggtgctg
atctgggccttctttgctgtcatctttctggcctcttacactgctaacctggctgccttc
atgatccaggaagagtacatcgacacagtttcaggcctctcggacaagaagtttcagcat
ccagaggagcagtacccacctctcaagtttggcacggtgcccaatgggagcacagaaaaa
aacattcgctccaactatccagacatgcaccagtacatgggcaaatacaaccagagagga
gtggaggacgccatcctgaaccttaagactgggaagctggatgcttttatttatgatgct
gcagtgttaaactatatggccaggaaggacgaaggttgtaaggtgatgaccataggctcg
gggaaggtttttgccaccacaggctacggtatcgccctgcacaaaaactcacgttggaaa
cgtcctcttgacctggccctgctgcagctagtgggagatgatgagattgaaatgctggag
cgcctctggctgtcaggtatctgccataatgacaaaattgaggtgatgagcagtaaactg
gacattgacaacatggctggggtcttctacatgcttctggtggctatgggcctcagtctg
ctggtgtttgcatgggaacatttagtctactggaaactgcgccactgtatggccactagt
tctgggaagttggactttctcttggcaattagcagaggcatgtacagctgctgcagtttt
gaggatgaaacagcaccaggtggatctaaatctttgccttcacaccaccacacagcaatg
gtgactgttccatcacagccacatgtagtttctacaactgtgaccaacccagcaattgca
atggcgcaacagcagcaacaaccacaacagcagcaaccaccgcctgtctacaaaacacct
ctaccaggctctcctcccactgtggtacattctgggtcagctctgggttcttctaacccc
cccattgctggtgcccccctcccttgctccacttttctgcctagaccagatcgaaggttg
gcagtagtggatcgctggaggttgcctaaaactgctacagccaccaaccccatggctgta
agagggggcatcactgacatggggccgtttgctcagaaagttccacaaaactgggctaca
gctgctggagggggtgggggactcgatggctataagagatattatggtcccattgaccct
gagggactgggatcctgcatggatcagcaagcagggtcccagacccccaagactatgcca
aggggccacccccagccccctccagcgagtgtggccttctattcagagaagagcatggat
cacggggtggggaagaaggtggtgggaggtggcggtggaggtcaggggaaagggcctgtt
aaacctctgggcacccccaggctgcctcctaagagtcaggcccctctacctcctacacct
ccactgccacatccctctccccctctcccttcatccttctggagaaagcggaggcccaag
aagcccaaagagcctgggggaccactttatgagaacattctgcctctggggcgaagggga
ggagcaagagatggaatgagggaaggaggaggaaggaggacccgtccgctttctcctcca
ctttcacttcctataccagttccactgagcccctcctatactcctccttctccttctgca
tctttgcactatatgtcctcatcctccacgtcaaccacctcatcaacgtcaacgtcttca
tctgcctcatcttcccgctccacctctcccacctactcttacagctcctccaggagcaca
cgggacaggactggaggaattgatggagaggacgacgatgatgatgaagatctgacagaa
gagtcaagtcttctccttgggaggggaagagagagggagcgctctatcattcgaccacgt
tcccttagccacgggcgcttgccaccaccaattccccccaggaaaccacgcacatcttgg
ggtgacagagaaagagaacgagaaagggaaagaggcgggagccaactgtctcagcttcaa
gagtggtgggcaagctggagtgaaagggagaggagaggaacaggtggagaaactgaaagg
ctgaaaagggaaaagaagaggaggaaagaaaaggagaaagaaaagaagaaaaagaaaaag
aacaaaaagagaaaaaagagagaggagagagaaagagagcgggagagagaaagaaagcga
aggaaggagaaaaagaagaagaagaaggcattaaaaacaaagaaaaggaaaaagtctact
gggggaaaacgatctgagccagaagaaggagatgtagaacaagaaagggaaggggaagct
gagagagaaagagatgaagggatacaagactactcttctttttctgcccaatatgggagc
acatttggagagaaggggagagattcatgggaaggagacagagaaagaggtaggggggaa
gatggcaatgacagggatgaggaggacagtggaagaagtagggaaaggcgtcccaaatcc
tcacattctcatagacgtcgaacccccaataagcgctactctaactctaataagtttcct
acttctgttaaattttggatgaatggaagaggagataactccaataccactccagtatcc
cttcatccacttcttccatcatccaagcggcgaaaaagtggagggattgacagagaagat
agtggtagagttggtgaaagacgtcctttgttaatgcattatgaaaaagagaaagcacag
acaagagaagggctgtctttccatgaatgggactcagatgataatgatgacgatgatgaa
gatgacgatgatgatgaggaagagagagacagagtgagggagcggggagaggacagggga
aggagggtaggtagaggggctgtctctgaatctgaaagggacagaggaagggtggaggac
agctactcagatgagggttcttcaggagaatttggtcgttttgaaagatactgggaagaa
agtgcaggaggcactggcactgggattggaggcataggtggaggaggctggttctttggt
acctatccctccagagagaaagggggaagtatcaatagtcgagatgattcgttactggga
actcgagcagagggatggattggtgctgatttctggggatctgggccaggaataggttgg
gcatctggtggagggagtggagggctgggctcacagtggccaccacccccaacagccttc
cctccacctagacgatactggtcaatggacaaaattcctgtgaagggagaaaaaaagtgg
aagggtggtggcggaaagagaaaaggacgaagcagggaaagactggatgagggaggacga
tcaactctgtgttcctgcagccttttcccacagccccatccttatccacatccccatggc
cgttcacaaacttctaattccaagagaagagcatcagcactttcccatagccaagaagag
cttcttccccactgccacagcttcagcgggggttctcgtcccaaacctttgcctcccaaa
ccagattccagtcaagccaaatcaggcagccaatctaacctcagcctcaacacacaaccg
acagaccatcaaccacagccctcaccatcaccaccacagcagccatccttgtcacccact
tcgctccccatgcccatcgtacctccatcctcctcagcctctgtctcgccaccagcaggg
gtagggatggcaggtccggctcaggcttcagccagtgccaaactccaatatcagagactg
cgctctgtgcctcagccacggaggttctactctccccacctaccactcaaagccaagagc
ctgtgctcacgtcgagggtcagcccacttttccagcctggagagtgaggtatga
DBGET
integrated database retrieval system
