Xiphophorus maculatus (southern platyfish): 102220646
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Entry
102220646 CDS
T02923
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04020
Calcium signaling pathway
xma04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
102220646
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
102220646
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xma04040
]
102220646
Ion channels [BR:
xma04040
]
Ligand-gated channels
Glutamate (ionotropic)
102220646
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
102220646
NCBI-ProteinID:
XP_023194593
Ensembl:
ENSXMAG00000003092
LinkDB
All DBs
Position
8:complement(6482728..6538998)
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AA seq
946 aa
AA seq
DB search
MRLFLLAVLLSCSCARAGCEPKIVNIGAVLSQKRYEQVFKDAVNQANQVYGRDKFKLNAI
SVTHKANAIQMALSVCEDLIHSQVYAILVSHPPQSSDHLTPTPVSYTAGFYRIPVVGLTT
RMSIYSDKSIHLSFLRTVPPYSHQAHVWFDLMREFNWNHIILIVSDDHEGRAAQKRLETL
LEERETKNKKRNYENLDQLSYDNKRGPKAEKVLQFSQETNLTALLLEAKELEARVVILSA
SEDDAAAVYKAARFLNMTGSGYVWLVGEREMSGKALSEAPDGLIALQLINGKNESAHITD
AVAVVAQSIQELFEKENITEPPKGCVGNTNIWKTGPLFKRVLMSSKYPEGLTGRVEFNDD
GDRKYAHYTILNYQKSRLVQVGIYNGTQVVMNNQRKIIWPGGETEKPQGFQMSTRLKIVT
IHQEPFVYVKPTMQDGTCNEEKALNGVIIKKVICTGPNETIPGRPIVPQCCYGFCVDLLI
KLAMTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTINNERA
QYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFS
PFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIV
ASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYR
HMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRK
DSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGI
AAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQPSSSVETQDDRKSGRAEPDPK
KKASFRSISTTLASSIKRRRSSKDTFPPTDATGQLNLSDPSVSTVV
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgtttctgctggcggtgctcctctcgtgctcctgcgcgcgggccggctgcgag
cccaagatcgtgaacatcggggccgtcctgagccagaagaggtacgagcaggtgttcaag
gatgccgtgaaccaggccaaccaggtgtacggccgggacaagttcaagctgaacgccatt
tccgtcacgcacaaggccaacgcgatccagatggctctgtcggtgtgcgaggacctgatc
cacagccaggtttacgccatcctggtgagtcaccctcctcagtccagcgaccatctcacc
ccgacgcccgtctcctacacggccggcttctaccgcatcccggtggtggggctcaccacg
cgcatgtccatctactccgacaaaagcatccacctgtccttcctgcggacggtcccgccg
tactcccaccaagctcacgtttggttcgacctgatgcgcgagttcaactggaaccacatc
atcctgatcgtcagcgacgaccacgagggccgggcggctcagaagaggctggagacgctg
ctggaggagcgagagacgaagaataaaaaaaggaactatgaaaacctcgaccaactgtcc
tatgacaacaagcgaggacctaaggcagagaaagtcctacagttcagtcaggagacaaac
ttaaccgcgctgctgctggaggctaaagagctggaggcccgagtcgtcatcctgtccgcc
agcgaggacgatgctgccgccgtgtacaaggcggcccgcttcctcaacatgaccggctcg
ggctacgtgtggctggtgggggagcgggagatgtccggtaaagctctgagcgaggcgcct
gatggactgatcgccctccagctcatcaatgggaagaacgaatcggcccacatcaccgac
gccgtggcggtggtggcccagtccatccaggagctgtttgagaaggagaacatcacagaa
ccaccgaaaggctgcgtgggcaacaccaacatctggaagacggggcctctttttaagcga
gtgctgatgtcgtccaaatatccggagggtctgactggacgcgtcgagttcaacgacgac
ggagacaggaaatacgcccactacaccatcctcaactaccagaagtctcgcctggttcaa
gtcggcatttacaacggcacacaggtggtgatgaacaatcagcgcaagatcatctggcct
ggaggcgagacggagaaaccgcagggcttccagatgtctacccgattaaagattgtgacg
attcaccaggagccgtttgtgtatgtgaaaccgacgatgcaagacgggacctgcaacgag
gaaaaggcattaaatggagtgattataaagaaggttatctgtaccgggcccaacgagacc
atcccagggcgtcccatcgtgccgcagtgctgctacggcttctgtgtcgacctgctgatc
aaactggccatgaccatgaacttcacctacgaggtccacctggtggctgacgggaagttt
ggaacccaagagcgggtgaacaacagcaacaagaaggagtggaacggcatgatgggagag
ctgctgggtgggctggctgacatgattgtggccccgctgaccataaacaacgagcgtgcc
cagtacatagagttctctaaaccctttaaatatcaaggcctcactatcctagtcaaaaag
gaaattcctcgaagtacgctggactcatttatgcagccgttccagagtacgctgtggctg
ctggtgggtctttcggtgcatgtggtggcggtgatgctttaccttctagaccggttcagt
ccatttggaagatttaaagtaaacagtgaggaagaagaagaagatgccctcaccttgtca
tctgccatgtggttctcctggggagtgttgctgaactctggaattggagaaggtgcaccg
cgcagcttttcagcgagaatccttggcatggtgtgggctggttttgctatgatcattgtg
gcttcttacactgccaacctggctgccttcctggtgctggaccggcctgaggagcgcatc
accggcatcaatgacccaaggctgagaaacccatctgataaattcatctacgccacggtg
aagcaaagctccgtggacatctacttccgacgacaggtggagcttagcactatgtaccgc
cacatggagaaacacaactatgagagtgctgcagaggctatccaggccgtgcgtgacaac
aagctgcatgctttcatctgggactctgcggtgctggagtttgaagcctcgcagaagtgc
gacctggtgaccacgggagagctgtttttccgttcgggctttggcataggcatgcgcaag
gacagcccctggaaacagaatgtgtccctggccattctcagttctcatgagaacggcttc
atggaagacctagataaaacctgggtgagataccaggagtgtgactcacggagcaatgcc
ccagccacactcacctttgagaacatggcaggagtcttcatgctggtggccggaggcatt
gcggcggggatcttcctcatcttcatcgaaatcgcctacaaacgccataaagacgcccgc
aggaagcagatgcagctggcctttgcggccgtcaacgtctggaggaagaacctgcagccc
tcttcctctgtagagactcaggatgataggaaaagtggtagagcagaacccgaccccaaa
aagaaagcctcttttaggtccatcagtaccaccctggcttccagcatcaagagacgtagg
tcctccaaagacacgttcccacccactgacgccacgggccagctcaacctgtctgacccg
tccgtcagcaccgtggtgtag
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