Xiphophorus maculatus (southern platyfish): 102221255
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Entry
102221255 CDS
T02923
Symbol
chd3
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 3 isoform X1
KO
K11642
chromodomain-helicase-DNA-binding protein 3 [EC:5.6.2.-]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102221255 (chd3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xma03036
]
102221255 (chd3)
Chromosome and associated proteins [BR:
xma03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
102221255 (chd3)
Chromatin remodeling factors
NuRD complex
102221255 (chd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
HDA2-3
ResIII
AAA_22
DEAD
HMG_box
HTH_23
PHD_2
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
102221255
NCBI-ProteinID:
XP_023201885
Ensembl:
ENSXMAG00000016035
LinkDB
All DBs
Position
14:10796363..10846269
Genome browser
AA seq
2129 aa
AA seq
DB search
MSSPLRSCEEDEGMVVNSEGGDFDEEDNEDDGELDENASDINSPAAPRETATPPAAPDED
PEISDREVPCKKKGRPKKKKDTKKKEKEGKPAKTKKRKKIDSDVERVSDRERDYGENSDS
IASDYGSGEKKKKKKHKERKEKKTKKKKKDDGDRDSSQEETTKQPIEQKTSAQLAKEWGL
EDVDHTFTEDDYRELTNYKAFSQFMRPMIAKKNPKIPMSKMMTILGAKWREFSSNNPFKG
NAAAVAAAAAAAAIAVAEQVSAATASPEPPPQPPPIRKAKTKEGKGPGYKKRSKSPRVPD
KKKALSKAKKMAPIRIKLLPIAGKRKKSCSSDDMDEEESEQEDSSVHSSSVRSDSSGRVK
KNKRGRPAKKKKKDKIPGEEEGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLEPE
LDKAPEGKWSCPHCEKEGIQWEAKDEDFEDFEEDSEDRVISEVSIGVPTGAEEEEDDHME
FCRVCKDGGELLCCDTCTSSYHIHCLNPPLPEIPNGEWLCPRCTCPPIKGRVQKILHWRW
GEPPPPIPVPLPPDAPPDAPPLPPMKGRAEREFFVKLTSQSYWHCTWITELQLEIFHSVM
YRNYQRKTDMDEPPSLDYGSGAEDENGVCKSEKRRAKDPHYALLEDKYYKYGIKPEWMMI
HRIINHSVDKKGMYHYLVKWKDLTYDQCTWERDDMDVPDFELHKTNYWRHRDNILKEDPD
KPRKMMSKEGDGEEEESLPSPLTDPTIKYEEQPDFVTATGGTLHLYQLEGLNWLRFSWAQ
GTDTILADEMGLGKTIQTIVFLYSLFKEGHTKGPFLVSAPLSTIINWEREFEMWAPDFYV
VTYTGDKDSRAIIRENEFTFDDSIKTGKKAFKLRREAPIKFHVLLTSYELVTIDQTALKS
IDWACLVVDEAHRLKNNQSKFFRRLNDYKIDYKLLLTGTPLQNNLEELFHLLNFLTPNRF
NNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKK
YYKLILTKNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVASMEAQKTPTGAYEGSA
LTKASGKLTLLQKMLRKLKDQGHRVLVFSQMTKMLDLLEDFLDYEGYKYERIDGGITGAL
RQEAIDRFNAPGACQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIG
QANKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKAGSMTKQELDDILKFGTE
ELFKDEGEGMKNNSRDKVEDEGSVIHYDSTAIERLLDRSQDATDDSDVQNMNEYLSSFKV
AQYMVREEDKIEEIEREIIKQEENVDPDYWEKLLRHHYEQQQEDLASKLGKGKRNRKPVN
YNDAAQEDQEWHADISDNQSEYSVGSEEEDEDFDDRPEGRRQSRRQLRNEKDKPLPPLLA
RVGGNIEVLGFNTRQRKAFLNAVMRWGMPSQDAFSSQWLVRDLRGKTEKEFKAYVSLFMR
HLCEPVADGAETFADGVPREGLCRQLVLTRIGVMSLVKKKIQEFEHINGRWSLPELKPEV
TVDKSSSRASSPAAKTATPTPDASFNNTPCTSKPATPAPSERLEKNGKEGEKEEEKGDAD
ASAEKEKVKEKEQQREVDGNKTGDAEELSSSTKESSQKASPSQKMDGKEESTTKEDDMEE
STESSAATSEENKQQEDSKEETKQNTDVTEKKSEGERPGEDKEKEKRDEMRTSSEATEAR
EKTEASDLKREEVKGERDAGKEIKASKEETTKGNGKPQTERPRFMFNIADGGFTELHTLW
QNEERAAISSGKMNEIWHRRHDFWLLAGIVVHGYARWQDIQNDPQFAIVNEPFKSQANKG
NFLEMKNKFLARRFKLLEQALVIEEQLRRAAYLNMTQDPSHPAMALNARFAEVECLAESH
QHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTRLPATLSRVPPIAARLQMSERSI
LSRLASKGTETHTPPPIPPGPYATPQNYGAPFTPAPPSALHIGGANYSQMPPGSFISEAA
AAAAAAGATWGAAGGATGGSTAAGVFQKTKEHDVMQRQRVVDLWKDGKSEGAIGLELRMP
KSTVHSIIVKYRLSNTVENLPRNGRPKKP
NT seq
6390 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctcctctccgctcctgcgaggaagacgagggcatggtggttaattccgaggga
ggagattttgatgaagaagacaacgaggacgacggagagctggacgagaacgcaagcgac
ataaactcgccggcggcgcctcgggaaactgcaacaccaccagccgcgccagacgaagac
ccagagatatcagaccgagaggtcccgtgcaagaagaaaggccggcccaagaagaagaag
gacacaaagaagaaagagaaagaggggaaacctgccaaaacaaagaaacgcaagaagatt
gacagcgatgtagagcgagtctcagacagagaaagagactatggtgaaaactcagacagc
atcgccagtgattatggctctggcgagaaaaagaaaaagaagaaacataaagaaaggaag
gagaagaaaaccaagaaaaagaaaaaagatgacggggaccgagacagtagccaggaggaa
acgacgaaacagccgatagagcagaagacgtctgcccagctggcaaaggagtggggcctg
gaggatgttgatcataccttcacagaagacgactacagggagctcacaaattacaaagcc
ttcagccagtttatgaggccgatgatagccaagaagaacccgaagatccccatgtcgaag
atgatgaccatcctgggggccaagtggagggagttcagctccaacaaccccttcaaaggc
aacgccgctgccgtcgcagccgctgctgccgccgccgccatcgctgtcgccgagcaggtc
tctgcagcgaccgcctcgcccgagccgccgcctcagccgccgcccattagaaaggccaag
acgaaagagggcaaaggtccaggatataaaaagcgcagtaaaagtcctagagtgcctgac
aagaagaaagccctatctaaagctaaaaagatggctcccatccgtattaaactattacca
atagctgggaagaggaagaaaagctgctctagcgacgacatggatgaggaagagtcagag
caggaggactccagcgttcacagctcctccgttcgctccgacagctccggccgagtgaaa
aagaacaagcggggacggcctgccaagaagaagaagaaagataagattccaggtgaggaa
gaaggcgacggctatgagacggatcaccaggactactgtgaggtgtgtcagcagggcgga
gagatcatcctgtgcgacacctgtcctcgagcgtaccacctcgtgtgccttgagcctgag
ctggacaaggcccccgagggcaagtggagctgcccgcattgtgaaaaagagggaatccaa
tgggaggcgaaagacgaagactttgaggacttcgaggaggacagcgaggacagagtgata
tctgaggtcagcatcggggttcccactggcgcagaggaggaggaggacgaccacatggag
ttctgtcgggtgtgcaaggacggcggcgaactgttgtgctgcgacacgtgcacgtcctcc
taccacattcactgtctgaaccctccgctgcccgagatccccaacggagagtggctctgt
ccgcgatgcacgtgcccgccaatcaaaggaagggtccagaagatactccactggaggtgg
ggcgagcctcctcctcccattcctgtcccgctgccccctgacgctcctcccgatgcccct
ccactgccgcccatgaagggcagagctgagagggagttttttgtcaagctaaccagccag
tcgtactggcactgcacctggatcaccgagctgcagctggagatcttccactcggtgatg
tacagaaactaccagaggaagaccgacatggacgagccccccagcctggactacggatcg
ggcgcagaggacgagaacggagtgtgcaagagcgagaagaggcgggccaaagatccccac
tacgccctgttggaagacaaatactacaaatacggcatcaagcccgagtggatgatgatt
caccgcatcataaaccacagcgtggataaaaaggggatgtaccactacttggtaaagtgg
aaagatctgacctatgaccagtgcacctgggagagagatgacatggatgtacccgacttt
gaactccacaagaccaactactggagacacagggacaacatcttgaaggaagaccccgat
aaacccaggaaaatgatgagcaaggagggagacggtgaagaggaggagtctcttccctcc
ccactcacagatccgacgatcaaatacgaggagcagcccgacttcgtcacggcgacaggc
ggcaccctgcacctctaccagctggagggcctcaactggctgcgcttctcctgggctcag
ggcaccgacaccatcctggcagatgaaatgggtctgggcaaaaccatccagacaatcgtc
tttctctattcactgttcaaggagggccacactaagggtcctttcctggtcagtgcaccc
ctctccactattataaactgggagagggagttcgagatgtgggcgcctgatttttacgtg
gtgacgtacacgggagacaaagacagccgagccatcatcagagagaacgagttcacgttc
gacgactccatcaaaaccggaaagaaggccttcaaactcaggcgcgaggctcccattaaa
tttcacgtccttctgacctcctatgagttggtgaccatcgatcagacggcgctcaagtcc
atcgactgggcgtgtctggtggtggacgaggctcaccgcctcaaaaacaaccagtccaag
ttcttcaggcgtttaaatgactacaaaattgactacaagctgctgctgactggaactcct
ctgcagaacaacctcgaagagttgtttcacctgctcaacttcctcaccccgaatcgcttc
aacaacctggagggcttcctggaagagttcgccgacatctccaaagaggaccagatcaag
aagctccacgacctgctggggcctcacatgctgcggaggctcaaggccgacgtgtttaag
aacatgccggctaagaccgagctgattgtcagagtggagctgagccccatgcagaagaaa
tactacaagttgattctgaccaagaacttcgaggctctgaactcgaaaggcggaggaaac
caggtgtctctgctcaacatcatgatggacctgaagaagtgctgcaaccacccgtacctc
ttccctgtcgcctccatggaagcccagaaaacacccaccggggcgtacgaaggctcagcc
ctcaccaaggcctctgggaagctgacgttgctgcagaagatgctgaggaagctgaaagat
caggggcatcgagtgctggtcttctcacagatgactaaaatgctggatttattagaagat
tttttggactatgagggttacaagtacgagaggattgatggaggcatcacaggcgcactg
agacaagaggccatcgacagattcaacgctcccggagcgtgtcagttttgcttcttgctc
tccaccagagccggaggtctgggcataaacctggctacggccgacacggtcatcatcttc
gactctgactggaacccccacaatgacattcaggcgttcagcagagctcatcgcatcggg
caagccaacaaggtgatgatctaccgctttgtgacgcgagccagcgtggaggagcgcatc
acccaggtagccaaaaggaagatgatgctgacccacctggtggtgcggccaggtctggga
tccaaggccggctccatgacgaagcaggagctggatgacatcctcaagtttgggacggag
gagctcttcaaggatgaaggagaaggtatgaagaacaactctcgggacaaagttgaggat
gagggcagcgtcattcactacgacagcaccgccatcgagaggctgctggatcgcagccaa
gacgccacggacgactcggacgtccagaacatgaacgagtacctgagctcctttaaggtt
gcccagtacatggtccgagaggaggacaagattgaggagatcgagcgggagatcatcaag
caggaggagaacgtggacccggattactgggagaaactgctgcggcatcactacgagcag
cagcaggaggacctggccagcaagctaggtaaagggaagaggaaccgcaagcctgtgaac
tacaacgacgctgcgcaggaagaccaagagtggcatgctgacatttcagataaccagtcc
gaatactccgtgggctccgaggaggaggatgaggacttcgacgatcggccagaaggtcgg
aggcagtcacgtcgtcagctgaggaatgagaaagataaacctctgcctcctcttctggcc
agagtgggaggcaacatagaggttcttggtttcaacacacggcagcgcaaagctttcctg
aacgcggtgatgcgttggggtatgccgtctcaggacgcgttctcatctcagtggctcgtt
agggacctcaggggaaaaactgagaaggaattcaaagcttacgtgtctctcttcatgcgt
cacctgtgcgagccggtcgccgacggggccgagacgtttgccgacggcgtccccagggag
ggcttgtgtcggcagctcgtcctgacgcgtattggcgtcatgtctctggtcaagaagaag
atccaagagtttgagcacatcaacggacggtggagccttccggagctcaaacccgaggtc
accgttgacaaatcgtcctcccgggcctcctctcccgccgctaagaccgcgactcccaca
cccgacgcaagcttcaacaacacgccatgcacctcaaagccagcgactcctgctccatcg
gagaggctggagaagaacgggaaggagggcgaaaaggaggaggagaagggggacgctgat
gcctctgcggaaaaggagaaagtgaaggagaaggagcagcagagagaggtggacggcaac
aagaccggcgacgctgaggagctttcatcctcaacaaaagaatcgtcgcagaaggcatct
ccaagtcaaaagatggacggcaaagaagagagtaccaccaaagaggatgacatggaggaa
tcgaccgagtcttcagccgccacatcagaggagaacaaacaacaagaggacagtaaagag
gagactaaacaaaacaccgacgtcacagaaaagaagtcagagggagagaggcctggggag
gacaaggagaaagaaaagagggatgaaatgcgaacatcttcagaggcaacagaagccagg
gaaaaaaccgaggcgtctgacctgaagagagaagaggtcaaaggtgaaagggatgctggg
aaagagatcaaagcatccaaggaggagacgacaaagggtaatgggaagcctcagaccgag
cggccgcgcttcatgttcaacatcgcagacggcggcttcacagagctgcacactctctgg
cagaacgaggagcgggctgccatctcctcgggtaagatgaacgagatctggcaccgtcga
cacgacttctggctgctggcgggaatcgtggtacacggctacgctcgttggcaggacatc
cagaacgatccacagttcgcaatcgtcaatgagccgttcaagtcgcaggcaaataaagga
aacttcttggaaatgaaaaacaagtttttggctcggcgttttaagctgctggagcaggcg
ctggtgatcgaggagcagttgcggcgggcggcttacctaaacatgacccaggacccgagc
cacccggccatggcgctcaacgctcgcttcgctgaggtggagtgcctggcggagtcgcac
cagcacctcagcaaggagtcgctggcagggaacaagccagccaacgctgttctgcacaaa
gtgttgaaccagctggaggagctgctgagcgacatgaaggccgacgtgacccggctgccc
gccacactgtcccgagtcccgcccatcgccgcccgcctgcagatgtcggagcggagcatc
ctcagccggctcgccagcaagggcactgagacgcacacgcccccgcccataccgccggga
ccctacgccacccctcagaactacggcgcgcccttcaccccggccccgccgagcgccctg
cacataggaggagccaactacagccagatgccgccgggatccttcatatcagaagccgcc
gccgctgccgctgctgctggggccacctggggtgccgctggtggagccacaggggggtca
actgccgccggggttttccagaagaccaaggagcacgacgtgatgcagcggcagcgagtg
gtggacctctggaaagacggcaagtcagagggagctatcggactggagctgaggatgccc
aagtccacggttcacagcatcattgtcaagtatcggcttagcaacacggtggagaacctg
ccgcgtaacgggcgaccaaaaaagccttga
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integrated database retrieval system
