Xiphophorus maculatus (southern platyfish): 102221611
Help
Entry
102221611 CDS
T02923
Symbol
hdac5
Name
(RefSeq) histone deacetylase 5 isoform X4
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
102221611 (hdac5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xma03036
]
102221611 (hdac5)
Enzymes [BR:
xma01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
102221611 (hdac5)
Chromosome and associated proteins [BR:
xma03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
102221611 (hdac5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
102221611
NCBI-ProteinID:
XP_005811295
Ensembl:
ENSXMAG00000017412
UniProt:
A0A3B5RCG1
LinkDB
All DBs
Position
16:complement(25433769..25498697)
Genome browser
AA seq
1102 aa
AA seq
DB search
MQGGSPGSAFMNSSHESIMEVKSSLPSGMQSPVEATCEQRGGGGEGGGCIPGEGPGGGGG
PVDLRTEPRLGSVSSGGAVDTALREQQLQQELVLLKQQQELQKQLLFAEFQKKHEVLTRQ
HEVQLQEHLKQQQELLAAKRQQELEHKRKLEQQRHEEQEKQRLEQQLLLLRNKEKGKESA
IASTEVKLKLQEFLLSKKEPGPGGLNHSFSPKCWGSQHTSLEQSSPPQSNTPGTPPSYKL
PPLLGNYEGKDDFPLRKTVSEPNLKVRSRLKQKVAERRSSPLLRRKDGTVISTFKKRAVE
ISVSSLCNSAPGSGPSSPNSSNTAIANGNTGSVPNIQTELRSLHQTLGADGTLSPLSLYT
SPSLPNISLGLPANTHITPPQKLSTQQEAERQAIQSLRGGGALTGKFLSTSSLPAGAAHD
VETPPPGSHSAHSSLLQHVLLLEQARQQTAMLVPMYNQSPLVTAERGVATGMRPVNKLPR
HRPLARTQSAPLPQSPQALQQLVVQQQHQHFLEKHYKMLSKGGDLPRPPPTHPEETEEEL
TETNDMQEDEGAAPNSLQKEGSDDSSHSSERLASHLKGEEESRVIQVKGESTESELDEDE
EDDDVIQLRESEEEERGSYIQQSLQHLSVFSSSLPHRALGRAKSSPATAVNPIKHLFTTG
LVYDSLMLKHQCVCGNAHIHPEHAGRVQSIWSRLQETGLLSRSERIRGRKASLDEIQSVH
SEFHTLLYGTSPLNRHKLDHKKLLGPISQKMYAVLPCGGIGVDSDTVWNEMHSSAAVRMA
VGSVIELAFKVAAGELKNGFAVVRPPGHHAEESTAMGFCFFNSVAITAKLLQQKLGVGKI
LIVDWDIHHGNGTQQAFYNDPNVLYISLHRYDDGNFFPGSGAPEEVGSGAGVGFNVNIAW
TGGVEPPMGDVEYLTAFRSVVMPIAQQFSPDVVLVSAGFDAVEGHQSPLGGYNVSAQCFG
KLTQLLMGLAGGRIVMALEGGHDLTAICDASEACVSALLGDLCDSGFQWPQEKPCPKACA
SLERVIDIQSKHWPCLQSASQTSGPSLLAGSPVAPGQSERDEAETLSAMASLSVDVDQPG
SVPENRESNRSTEEPMEEEPVL
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggcggaagtccaggctcagccttcatgaattcatctcacgagtccatcatggag
gtgaagagcagcctcccatcaggcatgcagagtccagttgaagcaacatgtgagcagaga
ggaggtggtggtgaagggggtggctgtattcctggagaaggcccaggtggaggcggaggc
ccggtggacttgaggacagagcccaggttgggctctgtgtctagtgggggagcagtggat
acagccctgagagagcagcagcttcagcaggaacttgtgcttctcaaacagcaacaggaa
ctccagaagcagctgctatttgcagagtttcagaaaaaacatgaagtgttaacaaggcag
cacgaagtccagctgcaagagcacttaaagcaacaacaggagctgctggcagcaaagcgg
cagcaggagttggagcataagagaaaactggagcaacaaagacacgaagaacaggagaaa
cagagactggagcaacaactgttgctgctgagaaacaaagagaaagggaaagagagtgcc
attgccagcacagaggtgaagctgaagcttcaggagtttcttctcagtaagaaagaacct
ggtccaggaggactcaaccattccttctccccaaagtgctggggaagccagcacacgtct
ctagagcaaagctccccccctcagagtaacacccccggaacccctccctcctacaaactc
ccccctcttctcggaaactacgagggcaaagacgacttcccacttcggaagacagtttca
gagccgaacctgaaggttcgatctagactcaagcagaaagtggcagagaggcgcagctct
ccattgttgcgcaggaaggatggaactgtcatcagcaccttcaagaaaagggctgttgag
atatcagtctcctccctttgtaacagtgctccaggctcaggtcccagcagccccaacagt
tccaatacggccatcgccaacggaaacacgggatcagtccccaacatacaaaccgagctg
agatctctccatcagacactgggggctgatgggacattgagtcctcttagcctctacacc
tcaccctccctgcccaatatctccctaggcctccctgccaatacacacatcacaccaccc
cagaaactgtccacccagcaggaagcagagcgtcaggccatccagtccctacgaggggga
ggagctctaactgggaagtttctctccacttcctccctaccagcaggtgcggcacatgat
gtggagactccgccccccggttctcattcagcccattcctcgttgttgcagcacgtcctg
ttgcttgagcaggcccgacaacagaccgctatgttagtgcccatgtacaatcagtcaccg
ctggttactgcagagagaggtgtagccactggaatgcggcctgtcaacaagctgccccgc
catcgaccgttggctcgcacacagagcgctcctttaccccagtcgccccaggcgctgcag
cagctggtggtccaacagcagcaccagcacttcctggagaaacactacaagatgctatcg
aaggggggagacctccctagaccaccaccaactcaccctgaggagacagaggaggagcta
acagagaccaatgacatgcaggaggatgaaggcgcggctcctaacagcctgcagaaagaa
ggatcagacgacagcagccactcatctgagcgactggccagccacttgaagggggaggag
gaatccagggttatccaggtcaaaggcgagagcacggagagtgagctagatgaagatgaa
gaggatgatgatgtcattcagctaagggagagcgaggaagaggaaaggggcagctacata
cagcagtccttgcagcatctgagcgtgttttcatcctcgctgccccacagagctctggga
agagccaagtcatcccctgcaactgctgtcaaccccatcaaacacctcttcaccaccggg
ttggtgtatgacagcctgatgctgaagcatcaatgtgtgtgtggcaatgctcacattcac
ccagagcatgctgggagagtccaaagcatctggtccagactgcaggaaacaggcttactg
agccgctctgagaggattcgtgggagaaaagcatctctagacgaaatccagtcggtccat
tcagagttccacaccctgctgtatggaaccagcccgctcaatcggcacaaactggaccac
aagaagcttctgggtcctatcagtcagaagatgtatgctgttctgccctgtggaggaata
ggggtggacagtgacactgtgtggaacgaaatgcactcatcagcagcagttcgcatggca
gtgggctcagttattgagctggcctttaaggtggctgcaggggagctgaagaacggcttt
gcagttgtgcgtccacctggtcaccatgcagaggaatccacagccatgggcttttgcttc
ttcaactcagtagccatcactgccaaactgctgcaacaaaagctaggagtagggaagatc
ctcattgtggactgggacattcaccatggcaacggcacccagcaggccttctacaacgat
cccaatgtgctctacatatctctgcatcggtacgatgatggaaacttctttcctggcagt
ggagcaccagaggaggtgggctcaggtgcaggagttggctttaatgtaaatatagcatgg
actggaggagtagagcctcctatgggtgatgtggaatacctcactgctttcaggagtgtg
gtaatgcccattgcccagcagttcagtccagatgtggtcctggtgtctgcaggctttgat
gcagtggaaggtcatcagtctcctctgggtggctacaatgtttctgcacaatgttttggt
aagctaacacagctgctgatgggactggcaggtgggcggattgtaatggcgctagagggt
ggccatgacctaactgctatctgtgacgcatcagaggcctgcgtctctgccctcctggga
gatctgtgtgactctgggtttcagtggcctcaggagaagccatgtccaaaagcctgtgcc
tccctggagagagtcatagacatccagagtaagcactggccttgtctccagagtgcgtct
caaaccagtggcccctctctcctggcagggtcccctgtggccccaggccagtctgagagg
gacgaggctgaaacactcagtgccatggcctctctaagtgttgatgtggaccagccaggc
tctgttcctgaaaacagagaatctaacaggtctacagaggagccaatggaggaagagcct
gttttataa
DBGET
integrated database retrieval system
