Xiphophorus maculatus (southern platyfish): 102221650
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Entry
102221650 CDS
T02923
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xma03000
]
102221650
Transcription factors [BR:
xma03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
102221650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
102221650
NCBI-ProteinID:
XP_014325662
LinkDB
All DBs
Position
13:13058403..13099165
Genome browser
AA seq
2281 aa
AA seq
DB search
MKPIKKQGRRSPQSTRTKGGKRRGVGETSDGGEKRDSDENRDESGSPQNRTLSSSISSSS
HSDSSQAGLVTTRDTSDGEGMSETLVLMDSGKLLTSSDERSGRSALSGSSSHCDSGGSSC
SNSSTPSANNSPNPASSRKTATFKARVPKKKYTSEHCSTATASNHSDPPSSTPPPPSGGV
LNRGSTGSGVEANVSYSDSNSQSGNLMDNFPSGATGRENSQESPGPPTLSLAMERPRRNE
ERVSPSPLPRCSSTDTASEHSADLEVVGDMPAIPHSMPRSAPSFSDSLSDTLAKGLKNQR
VLARQLRRHKSEEVGGEMRDKGRSSEFVFRAGVVRKVSGEFGCLEVQLNGEKTMCSYPYR
HDSPPGVVEIILDAPPPGVQTIQIGTRVCVPFGDEDSNEGQLQWYREGVVTEVDTHPAVA
NRYRVLLSEGRPHSLDVEDGRGATHAVWVSRQTLRLLVPPWDLDLPSCGGHGGEEGVREN
DKKHEEREDIDVEQEVCNLSQGMNTGMGSMFGREISYPGIITVSSPVTREWEIEKDRERE
RERLRKQERDRERENNAKQQQHHPYMPLTPEEDMEVSHFNMIPLGAIISGTKSRPVHQIV
SKPPSGYLNSHLPVVRGIGIPSTHLALSPHPNPSNVLLGLDSTNAAAGAVITAPQLPPLP
PISSSVSSRAEKASGGGSAGGGGGPVSGSNSSSANRSRTPLTAAQQKYKKGDVVCTPTGI
RKKFNGKQWRRLCSREGCSKESQRRGYCSRHLSMRTKEMEASGGGRERSGASSTGTLTPS
DLRLGSGRASSEFDWDETSMESSEASSRGGDSRPRLVLPSLLPQDLSRFDFDECEAATML
VSLGGSRSVTPSFSPISNQSPFSPTPSPSPSPLFGFRPATFSPITAPPSLNPRRPRQLSG
TKMGTPGSERERHLSGIVPSIQTNLTFTVPMSPSKRRPETHPPPPLHLIQDYQNKTDQQQ
LMGAGGSMAGDPAAFRVLSPHSQPTTPSSLSFSRPRSATSRPSSSAASTPPPMLVSPTPP
SPLPQEPSPRRIVPLRDSPVIVRNPDVPLAKFSDGPLVKRERNQMREKNQPQHSTPPGLQ
APVPINGATTNPAVLLRNPASTLVLVTSSSSLTPVTAGHAALSGSSVSAPSGSALSSSGS
GGRDRKPEGYPDTSGGALPQPVACHPTPTALLPLILPAESPHPAPRKQIIMGRPGTVWTN
VEPRSVPVFPWHSLVPFLDSSQSGAAGQPADGQQLVNQSKEPRCGVALVSEGRAGPPEPD
RGSPSRPPPTNDNPPADRGGADSETESDTDDPFSPGVGNDPSPSAGPMKRRTQSLSALPK
DGDRKREKDYIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGPNEKQKY
HDLAFQVKEAHFKAHPDWKWCNKDRRKSLSEGRGTPKELRERSMSESMDALSESQVLEGK
GGGPGWPGASERRGRGSGGQHPRPRAFSQSAVHTLEQRERQRELEKEDGTGLFRSRPPPQ
YHSCANEDVTSDEERMVICEEEGDDDVMEDSCPEGSIDLKCKERVTDSDEDEPDGQQDVQ
PENRSSPSVSDSSAKGEAGGPGDGEDRNRKRGAEAAEQEEGGTRKKEVSGGGSGVSVGPL
HQGQVLGGVRAAPPAVRLAASTPIAIASKPVDGGAALSSLSQEKKTNVLIGGGGTQLAAG
VQTQASVLPSKMLVPMATVRTGSTPPQPSISLVAPPLPVQNGPATGNKIIQLTSMPVVQT
NVHPSPGSPFPVSMATVMAPGATPPQPVLLTSPPTRITYVQSSPGVTTATPQQGAQPPGP
AYLSSHLATLGFAAIAPAGQTLVQPLLAQTPALGAQSQTPPGQTAAGRQVLTAIYPAQTV
ALATGVVPLAAAVPPAVASPAQDAMNPASPSTKAVQGSAVAAAFQLGTGMKVEVKQESQL
DSETEGSSGCNPSCSMGSCENGGATVKKEEDISLSIKEENMCDEIERERQSEADEERDGV
MKESRKEAKETDRDDRNATNNSKEAGPRSPPPPPPPSSGLDPPPPPPAEKETPTSSSSSS
SSSSKRIKFRPPPLKKTPDAHDKVLSETSFEERFAELPEFNPEEVLPSPTLQSLATSPRA
ILGSYRKKRPNSTDLDGAAEDPSSPRRKTRRLSSCSSEPSTPKSAAKCEGDIFTFDRPAG
PEGDVPLGDPDRVPYSSLRRTLDQRRALVMQLFQEHGFFPSAQATASFQARYPDTFPTKL
CLQLKIREVRQKIMQTATPGTLESSDAGPAPSHGQSARDDGGAELQGDKGQNLEEPKNEG
S
NT seq
6846 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgataaagaagcaaggtcggcgctcccctcaatccactcggaccaaaggcggg
aagcgccgcggagtcggggagacctcagatggcggagagaagagagattcagatgagaac
agagatgaaagcggatcccctcaaaaccgaactctctcctcgtctatctcctccagttcc
cactcagactcctctcaggccggcctagtgacaacgcgggacacttcggatggggaggga
atgtccgagactttggttttaatggattcagggaagctgctgacatcctctgatgaaagg
tccggaaggtcggcgctaagcggcagcagtagccactgtgacagcggcggcagcagctgc
agcaacagcagcacgccgagtgccaacaacagtccgaatcccgcctccagccggaaaacc
gccactttcaaggcacgcgttcccaagaagaaatacacttctgagcactgctcaacagct
actgccagcaaccatagcgaccctccatcctctacaccccctcctccaagcggtggggtc
ctcaaccgggggtcaacaggttcaggagttgaagccaatgtctcttattctgacagcaac
agtcagagtgggaatctgatggacaactttcctagtggagcaactggcagggagaattcc
caagaatccccaggacctcccacattgtctcttgcaatggaaaggcccagaagaaatgaa
gagcgagtttccccgagccccctgccccgatgttcttcaacagacactgccagcgaacac
tctgctgatctggaagtggtcggtgacatgccggccatcccacattctatgcctcggtct
gcgcccagcttttccgacagtctgtcagacaccctggctaaaggattgaaaaaccaacgc
gtcctcgcccgccagctcaggaggcacaaatctgaggaagtagggggtgaaatgagagac
aaagggaggagttcagaatttgtgttcagggctggagtggtgcgtaaggtcagcggcgaa
ttcggttgtttggaggtgcaactgaacggcgaaaagacgatgtgcagttatccttaccga
catgatagccctccaggggtggtagaaattattttagatgcacctccacctggtgtccaa
acaatacaaattggcacccgtgtctgtgtaccatttggtgatgaagatagcaacgagggc
cagttgcagtggtacagagaaggtgtggtgactgaagtagacacacatcctgccgtggcc
aaccgttaccgtgtcctgctgtctgaaggaaggcctcattctctggatgtagaagacggc
agaggtgctacccatgctgtatgggtctcccgacaaactctccgtcttctggtgccaccg
tgggacctagatttgccatcctgcggtggccacggaggagaagagggcgttagagaaaat
gataaaaaacatgaagaaagggaagatatagatgtggaacaggaggtgtgtaacctcagc
caaggaatgaacactggcatgggttcgatgtttgggagggaaatatcgtacccgggtatt
atcactgtctcctcaccagttactcgagaatgggaaattgagaaagaccgggaaagggag
agagagcgtttgaggaaacaggagagagacagagaaagggagaataatgcaaagcagcag
caacaccacccatatatgccactcacccctgaagaagacatggaggtgtcccacttcaac
atgatcccactcggggcaatcatatctgggaccaaatcaagaccagttcaccagattgtc
tcaaagcccccgtctggctacctcaattcccacctgcctgttgtgcggggcattgggatt
ccttccacacacctggccctcagtccccaccctaatccgtcgaatgtcctcttaggcctt
gactcaacaaatgcggcagctggtgctgtcattactgccccccagctgcctcctctgcct
cccatctcctcctctgtgtcctccagagcagagaaggcttctggaggaggatcagccggt
ggcggaggaggaccagtgtcgggttcgaactcttcctctgcaaaccgttcccgcactcct
ctcacagcagcccagcaaaagtacaagaagggagatgtggtgtgcacaccaacgggcatc
cggaagaagttcaacggaaagcagtggaggaggttgtgttctcgggagggctgttccaaa
gagtcccagcgtcgaggatactgctccagacatctttcaatgaggaccaaggagatggag
gccagcggaggcggccgggagcgcagtggagccagcagcaccgggactctaacgccgtcc
gatctccgactgggcagtgggagagccagctcagagtttgactgggatgagacgtcaatg
gaaagcagtgaagccagcagccgtggaggagactcccgtccccgcttagtactgccatcc
ctgcttccccaggacttgtctcgttttgactttgatgagtgcgaggcagcaaccatgctg
gtttctctggggggttcccgctctgtcacaccttcattctctcccatttccaatcagtct
ccattctcaccaaccccgtcaccctccccgtcgcctctcttcggcttccgccctgccact
tttagtccaatcactgccccaccttcacttaatccacgccgccctcggcagctcagtggc
accaagatgggtacgccgggctctgaacgagagcgccacctgtcaggaattgtaccctcc
atacagaccaacctcacctttacagtccctatgagccccagcaagaggaggcctgagacc
cacccgccgcctcctctacatttaattcaggactatcaaaataaaacagaccagcagcag
ctgatgggcgcagggggcagtatggctggagacccagctgctttcagagtcctctccccc
cacagtcagcccacaacaccttcctcgctttccttttcacgccctcgcagcgccaccagc
aggccgtcgtcctccgctgcctctacgcctccacccatgctcgtttctccaacgcctcct
tccccattaccccaggaaccctccccacgccgcatagtacctcttcgcgactccccagtc
atcgtccgcaacccagatgtccccttggcgaagttctcagatggtccattggtaaaaaga
gaaagaaaccagatgagggagaagaaccagccgcagcactccactcccccaggcctgcag
gccccggtccccatcaacggggccaccaccaatccggcggtcctcctgaggaaccctgcg
tccaccctggtcctggtcacctccagttcttcgttgaccccagtcacagcaggtcacgcc
gcgctgtccggatcctctgtgtccgccccgtcgggctccgctctgtcctcgtccggttcc
gggggccgggaccggaaacccgaaggttacccggacacctcgggtggtgcgctgccgcag
ccggtggcctgccaccccacgccgaccgccctgctgccgctcatactgccagctgagtcg
ccacacccggcgccgcgcaagcagatcatcatgggtcgcccgggcacagtttggaccaac
gtggagcctcggtcggtgccagtgttcccctggcattcgctcgtcccgttcctggactcc
agccaatcaggagcggccggccagcctgctgatggccagcagcttgttaatcagagcaaa
gagcctcgctgcggtgtggccctggtgagcgaagggcgggcgggccccccggagccggac
agggggtcgccgtctcgccctcccccaaccaatgacaatcccccagcagacaggggcggg
gcggacagcgagacagagagcgataccgatgatccgttttcccccggtgtggggaacgac
ccgtctccctccgccggacccatgaagagacgcacgcagtcgctcagcgccctgcccaaa
gacggagacaggaagagggagaaggactacatccgccgccccatgaacgccttcatgatc
ttcagtaaacgccaccgagcgctggtgcaccagcggcaccccaaccaggacaaccggact
gtcagcaagatcctgggcgagtggtggtacgctctgggccccaacgagaagcagaagtac
cacgacctggcctttcaggtgaaagaggctcacttcaaggcccaccccgactggaagtgg
tgcaacaaagaccgcaggaagtctctgtctgagggccgggggacgccgaaggagctgcgg
gagaggagcatgtcggagagcatggatgcgctctcagagtcccaggtgctggagggaaaa
ggtggaggtccgggctggccgggggcatcggagcgtcgagggaggggttctgggggccaa
cacccccgtccccgagccttttcccaaagtgccgttcacaccctggagcagagggagagg
cagcgggagctggagaaggaggacggaaccggcttgtttcgaagccgaccgccgcctcag
taccacagctgcgccaacgaggatgtgaccagcgatgaggagcgcatggtcatctgcgag
gaggaaggagacgacgacgtgatggaggattcgtgccctgaaggctccattgacctcaag
tgcaaggagagagtgacagacagcgacgaggacgaaccggacggacagcaggacgtccag
ccggagaatcgctcctccccctccgtgtccgactcctccgctaagggcgaggccggaggt
cctggcgacggcgaggacaggaacaggaagcggggcgcagaggcagcggagcaggaagag
ggcggtaccaggaagaaggaagtgtccggaggcgggtcgggcgtctcggtcggtccgctc
caccagggccaggttctgggcggggtccgggcggcccccccggcggttcgcctggccgcc
agcactcccatcgctatcgccagcaaaccggtggatggcggcgccgccctcagctcactc
tcgcaggagaagaagaccaacgtcctgattggaggaggcggcactcagctcgctgcgggg
gtccaaactcaggcatcggtgttgccaagcaagatgttggttcccatggcaacagtgagg
acagggtccacgcctcctcagccctccatctccctggtggctccgcctcttcctgtgcag
aatggccccgcgacgggaaacaagatcatccagctcacctccatgcccgtggtgcagacc
aacgtccatccgagccctgggagccccttccccgtatccatggcgacagtgatggctccc
ggagccaccccgcctcagcccgtcctcctgacctccccgcccaccagaatcacctacgtc
cagtccagcccaggcgttaccacggcgacgccccagcagggcgcccagcctcccggtccg
gcgtatctctcgtcacacctggccactctggggttcgccgccatcgccccggccggacag
accctggttcagcctctgctggctcagactccggccctcggcgctcagtcgcagacgccg
ccgggtcagaccgccgcaggccgtcaggtactaactgccatctaccctgcacaaaccgtt
gccctggcgaccggtgtggtcccgttggcagccgctgtgccgcctgccgtggcttctcca
gcccaggacgcgatgaacccggcttctccgtcgaccaaagcggtgcagggttcagcggtg
gcggcggcctttcagctggggaccggaatgaaggtggaggtgaaacaggagagccagctg
gactctgagaccgaaggctcatcgggctgcaacccaagctgctcgatgggcagctgtgaa
aacggaggcgcaacagtgaaaaaagaagaagacatcagcctgagcattaaggaagaaaat
atgtgtgatgaaattgagagggagcgacaaagtgaggcagatgaagagcgagatggagtg
atgaaggagagcaggaaggaagccaaagaaacggacagagacgaccgcaacgcaacaaat
aacagcaaagaggctggacctcgttccccaccgccacctccacccccgtcctcaggtctg
gacccgcctccacctccaccagcagaaaaagaaacccccacctcctcttcctcctcctct
tcctcctcctccaagagaattaagtttcgcccccctccactcaaaaagacccccgacgct
catgacaaggttttgtcagagacgtcgttcgaggagcgctttgctgagcttccagagttt
aacccggaggaagttcttccgtcgcccacgctgcagagcctggccacctctccaagagcc
atcctgggaagctaccgcaagaagagacccaactccaccgatcttgacggggcggcagaa
gaccccagctcccccagaaggaagacgcgccgtctctccagctgcagctcggagcccagc
accccaaaaagcgctgccaagtgcgagggagacatctttacgttcgacagaccagcaggt
ccggaaggcgacgtccccctgggagacccggacagggttccgtactcgtctctgcggagg
acactggaccaacgtcgcgcgctggtcatgcagctttttcaagaacacggcttctttcct
tcagctcaggccacggcttccttccaggcgcgctacccggacacattccccaccaagttg
tgtctgcagttgaagatccgcgaggttcgtcagaagatcatgcagacagcgacgccgggg
accctcgagtcgtccgacgctggacccgccccgtcccacggccaatcagcgcgggacgat
ggcggggcggagcttcagggagacaaaggccaaaacttggaggaaccgaaaaacgaagga
tcgtaa
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integrated database retrieval system
