Xiphophorus maculatus (southern platyfish): 102221931
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Entry
102221931 CDS
T02923
Symbol
neo1
Name
(RefSeq) neogenin isoform X1
KO
K06766
neogenin
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04350
TGF-beta signaling pathway
xma04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
102221931 (neo1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
102221931 (neo1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
ig
Ig_2
Pur_ac_phosph_N
V-set
NDNF
fn3_2
C2-set_2
Sp38
C1-set
GH101_dom-5
DUF4959
V-set_CD47
EphA2_TM
FAM176
DUF4912
Motif
Other DBs
NCBI-GeneID:
102221931
NCBI-ProteinID:
XP_023188050
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All DBs
Position
4:26691332..26895965
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AA seq
1523 aa
AA seq
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MAERGAPALLSLLCLTFLFTETTAAKHVDKGSATQPFSPFWFTVEPQDTLAIRGNSALLN
CSVHSDEASPARIEWKKDGTFMSLVSDERRRVLPDGSLFFAHVVHSKHNKPDEGTYQCVA
NIDNVGSISSRTARLAVAGIPRFASQPSPASVHVGDNQVMACEVNSDLVPFTRWEKDKEA
LELSDRLIQLPSGALVISNASETDAGLYRCVVENVGSSKSSDEAPLQTIPEPGVERKLEF
LVQPAPVAKLLGAGVLLPCVATGYPPPHIRWMFGDKALEESNGRVEVTAGGSLQISNLTE
EDGGVYTCAAENSNTTIEAQAQLTVQVPPQFVKRPTNIYAHESMDIVFECEVSGSPAPTV
KWVKNGDAVIPSDYFKIIKEHNLQVLGLVKSDEGFYQCLAENDAGNIQSSAQLIILDHDV
ALPAFPPPSLTPNTTDHVTAGSGGVAAPAGPTPSAPRDVVASLVSTRFIKLTWRQPAEPH
GDDLTYSVFYSQEGTSRERVVNTSRPGEMQVTIQNLMPDTRYRFRVVAHNSNGQGESSAA
LKVATQAEVQVPGPAPNLQAVSNTPTSVFLSWDKPLTGNGDILSYKLYYTDRSVGTEEDV
DIDGQSYTMAGLKKNTEYSFRVVANNKHGPGVSTEDVMVRTLSDVPSAPPQNLTLEVQNS
KGIMVRWHPPPLSGQNGEITSYKIRYRKVPRRSESAVTTAGTELYKLIDGLEPGTEYSFR
VSAVTVNGTGPATEWAPAETFESDLDESRVPDQPSSLHVRPLVNSIVVSWTPPENQDIVV
RGYTISYGIGSPHAQTIKVDYKQRYYTIENLNSGSHYVITLKAFNNVGEGIPVYESAATR
VQSDPIDPDVDLYELFHAPYTPAPDPSPMMPPVGVQASVLSHDTIKVTWADNSLPKNQKI
TDNRHYTVRWKTNIPANTKVKMANSTSLSHVVTGLKPNTLYEFSVMVTKGRRASTWSMTA
QGTTFETIPSSAPKDVTVVSKENKPRTIIVNWQPPSEANGKITGYIIYYSTDVNAVVHDW
VIEPVVGNRLTHQIQELTLDTTYYFKIQARNSKGMGPMSEPVQFRTPKTESSDKMANDQA
SNIPPKPGPPGNSYPVAPRNSDGKIGPRNENLTVIIVSIIAVGVFTTIVVVVGALLCTRR
STSQQKKKRAASKSSNGSHKYKGNSKDLKPPDLWIHHERLELKPIDKSPEPNPIMTETPI
PRTSQDITPADSGLESNPHLQQRRNSYRGHESDDSMSTLAGRRVMRPKMMMPFDAQPPQP
VISAHPIHSLDNHHHHYHMGSLVSPTRSYLYHQGSGYPRPHACASPISHLERVDSSESVR
NTPSSEPLPPPTASSQVSCPSEIMADPEGSYHGSTTTEEEPSYSSNLPPHRPAHPHAHAH
PLKSFAVPAIPVSGHPSYESPALPSTPLLAQTGEHSPQTYPESVYHQWPPTHPHVVKTAS
IGTLGRTRTPMIVTVPNAPDVPETSKMLEDVDSVLASLPPCPSPAPRSNPIPLPQSYEPD
ELTEEMAHLEGLMKDLNAITTAP
NT seq
4572 nt
NT seq
+upstream
nt +downstream
nt
atggccgagcgaggagctccggcgctcctctctctcctctgtctcacctttctcttcacg
gagaccacggcggcaaagcatgtcgacaaaggctcagcaacgcagcccttcagccctttc
tggttcacggtggagccccaggacacgctggccatccgggggaactccgcgctgctcaac
tgctcggtgcacagcgacgaggcctcgccggcgcggatcgagtggaagaaggacggcacc
ttcatgagtttggtctcggacgagaggcggcgcgtccttccggacggctcgctgttcttc
gcccatgtggtccattcaaagcacaacaagccggacgagggcacgtatcagtgcgtggcc
aacatcgacaatgtgggctccatctccagccgcacggcgcgcctcgctgtagcagggatt
ccccggttcgccagccagccgtcgccggcctccgtccacgtcggggacaatcaggtgatg
gcgtgcgaggtcaactcggacctggttccgttcacgcgctgggagaaggacaaggaggcg
ttggagctgagtgacaggttgatccagctgcccagcggggccctcgttatcagcaacgcc
tcggagacggacgccggcctctatcgctgcgtcgtggaaaacgtgggttcctccaagtcc
agcgacgaggccccgctgcagaccatcccagaacctggagtggagaggaagctggagttc
ctggtgcagcctgcgcctgtggccaagctgctgggtgctggcgtgttgctgccgtgcgtg
gccacaggttaccccccaccacacatccgctggatgtttggagacaaagcgctggaggaa
agcaatggtcgtgtggaagtgacggcaggcggcagtctccagatttccaaccttacggag
gaagatggaggcgtgtacacctgcgcggctgaaaactccaacaccaccatcgaagcccag
gcccagctcacagttcaagttcctccccagtttgtcaaacggcccaccaacatctacgcc
cacgagtccatggacatcgtcttcgagtgcgaagtttcgggctcgcccgctcccaccgtc
aagtgggtcaagaacggagacgccgtcatccccagcgactacttcaagataattaaggag
cacaacctgcaggttctgggtctggtcaagtctgacgaaggtttctaccagtgcctggca
gaaaacgatgccggcaacatccagtcgagcgcgcagctcatcatcttggatcacgacgta
gccctgcccgccttcccccccccttcactgactcctaacactactgaccatgtaacagca
ggctctggaggcgtggccgcgccggcggggcccaccccctccgcgccgcgggacgtcgtg
gcttccctggtctccacccgcttcatcaagctgacgtggcgccagccggccgagccgcac
ggagacgacctgacctactccgtgttctacagccaggagggcaccagcagggagcgggtg
gtgaacaccagccgaccaggagagatgcaggtcaccatccagaacctgatgccagacacc
aggtatcgcttcagggtggtggcgcacaacagcaatggccagggcgagagctcagcagca
ctcaaagtggccacccaagctgaagtacaagtgccgggtccagctcccaacctgcaggcg
gtgtccaacactccgacctccgtcttcctcagctgggataaacccctcacaggcaacggg
gacatcctctcctacaagctctactacacagacaggagcgttggcaccgaagaggatgtt
gacatagacggccagtcgtacaccatggctggactgaagaagaacacagagtacagcttc
cgcgtggtggccaacaacaagcacggcccgggggtctccacggaggacgtcatggtccgg
acactttctgacgttccaagcgcccctcctcaaaatctcactttggaggtccagaactca
aagggcatcatggttcggtggcatccgcctccgctcagtggccagaatggggaaatcacc
agctacaagatacgctaccggaaagttccacggaggagcgaatcagctgtgaccactgct
gggacggagctctacaagctcatcgatggtctggagcccggaacggagtactccttccga
gtgtcggccgtgactgtgaacgggaccggaccggccaccgagtgggccccggcagagacg
tttgagagcgacctggacgaatctcgcgtaccggaccagcccagctcgctgcatgtccgc
ccgctggtcaacagcatcgtggtgagctggacgccaccggagaaccaggacatcgtggtg
cgcggctacaccatcagctacggcatcgggagcccccacgctcagaccatcaaagtggac
tacaaacagcgctactacactattgagaacctcaactccggctcccactacgtgatcacg
ctgaaggccttcaacaacgtgggggaggggatccccgtgtacgagagcgcagccaccaga
gtgcagtcagaccccatagaccccgatgttgacttgtacgaactgttccatgctccatac
accccagcgcccgaccccagtcccatgatgcctcccgtgggcgtgcaggcctccgttctg
agccacgacaccatcaaggtgacgtgggccgacaactcactgcccaagaaccagaagatc
accgacaaccgccactacaccgtgcgatggaagaccaacatccccgccaacaccaaagtg
aagatggccaacagcacaagcctgagccacgtagtgacaggcctgaagcccaacacactt
tacgagttctccgtcatggtgaccaagggccgccgcgccagcacatggagcatgaccgct
caagggaccacctttgagaccatccccagctccgccccaaaagacgtgacagtggtgagc
aaagagaacaagccacgcaccataatagtcaactggcagcctccctctgaagccaatggg
aaaattaccggttacattatctactacagcacagacgtcaacgcggtggtccacgactgg
gtcatcgagcctgtggtggggaaccgcctcacacaccagatccaggagctgactctggac
acgacgtactacttcaagatccaggccaggaactccaaaggaatggggcccatgtcggag
cctgttcagttcagaactcccaagactgagtcctctgacaaaatggctaatgaccaagct
tcaaatatcccaccaaagccaggacctccaggcaactcgtatccagttgcccctcgaaat
tcagatggtaaaataggtcctagaaatgagaatctcaccgtgatcatcgtcagcataatc
gcagtgggagtcttcaccaccatagtggtggtagtgggagccttactgtgcacgcggcgc
agcacgtcccagcagaaaaagaagcgagcggcctcgaaatcatcaaatggttcccataag
tacaagggaaactccaaagacctgaagccgcccgacctttggattcaccacgagaggctg
gaactgaaacccatagacaagtcgccggaacccaacccaatcatgaccgagacgcccatc
cctcgcacctcgcaggacatcacccccgccgacagcggcctggagagcaacccccacctg
cagcagaggcgcaactcctaccgaggccacgaatcagacgacagcatgtccacacttgca
ggccgccgggtgatgaggcctaaaatgatgatgccttttgacgctcagccgccccagccc
gtgattagtgctcaccccatccattccctcgataaccatcatcaccattatcacatgggc
agcctggtatcaccgacacgcagctacctctaccatcaaggcagcgggtaccctcgcccg
cacgcctgcgcctcccccatctcccacctagagagggtggactcttcagaatccgtgagg
aacacgccgagttcggagcccctccctccgcctaccgcctcctcccaggtctcctgcccc
tccgagatcatggctgacccagagggcagctaccacggctccaccaccaccgaggaagag
cccagctactccagcaacctgccgccacatcggccagcccacccgcacgcccacgcacac
cccctcaagagcttcgccgtgccggcgatcccggtctccggccatccgtcatacgagtcc
cccgccctgcccagtacgcctctgctcgctcagaccggtgagcactcacctcagacatac
ccagagtctgtttaccaccagtggccccccactcaccctcacgttgtaaaaacagcctcc
attggaacactaggaagaacacgcactccaatgatcgtaacggtgcccaacgcccccgac
gtaccagagacgagcaaaatgctggaggatgtagacagcgtgcttgcctccctgcccccc
tgtccctccccggccccccgcagtaaccctattcctctccctcagagctacgagcccgac
gagctgaccgaggagatggcgcacctcgagggcctgatgaaagacctgaacgccatcacg
acagcgccatga
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