Xiphophorus maculatus (southern platyfish): 102222142
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Entry
102222142 CDS
T02923
Name
(RefSeq) NLR family CARD domain-containing protein 3-like isoform X1
Organism
xma
Xiphophorus maculatus (southern platyfish)
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Gene cluster
GFIT
Motif
Pfam:
NACHT
FISNA
NLRC4_HD2
NOD2_WH
LRR_6
LRR_4
DUF577
Motif
Other DBs
NCBI-GeneID:
102222142
NCBI-ProteinID:
XP_023183336
Ensembl:
ENSXMAG00000016044
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Position
22:complement(3077194..3086999)
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AA seq
883 aa
AA seq
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MDIGQVLKMVGSKSERDKITSSSSPSMRSDSSKVDPLNFSDDPGSLLKRIQHINSHWDQC
ASFGQPPSSQCGKRPETRVALQITNKNCLLQADVGLQEVLKEHKISLRKRCECVTEGSDE
TGSTTLLNRIYTDLYITEGQSEEANTQHEVKQLETAFKIQNFHDSPIRCHDIFKSFPDQH
GAIRVVLTNGVAGVGKTFSVQKFTLDWAEGLENQDVSVVVLLSFRELNLIKDEQHSLLTL
LHVFHPTLQKLPAEQLAVCKLLFIFDGLDESRLSLDFNNSQLVSDVTQKSSVNVLLTNLI
KGNLLPSALIWITSRPAAANQIPPSCVSRVTEVRGFTDAQKEEYFRKRFSDEELSSRIIS
HIKTSRSLHIMCGIPVFCWITATVLENMLTSEQRGELPKTMTDMYSHFLLVQTTRKKNKY
HGGHETSPQELMEADREVLLKLGRLAFEHLEKGNIMFYQEDLEQCGLDVTEASVYSGVCT
EIFKRESVIFQKPVYCFVHLTIQEFLAAVYMFHCFTNTNTEVVEKFLDDIKKGKPSDSNP
SSSSRISDRPSQSIDLFLDQVLRRSLKILNGHMDLFVRFLHGFALPCNQRLLAGLVTQTK
TSPDVIQRVINNLKKTSSEDISPDKGINIFYCLVEMKDHSVYQEIQEFLKSKNKSKCELS
EIHCSALASILQMSEEVLDEMELVRYNTSKEGRRRLIPAVRNCRKFVLTFCDLSETHCEV
VASALKSNPSHLAELDLSYDGLPHSGLKLLFAGLESPNCRLENLRLINCSLSESSGAHLA
SALKSNPSYMKHLDLSSNRLKDAGVEQLCGFLKSPYCKLQTLRLRNCSLTGISCLSLVSA
LGSNPSHLAELDLVDNRLKDPDVEQLCDLAASSDFRLETIKWK
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atggatatcggacaagtcctcaagatggttggttcaaagtcagagcgagacaaaataacc
tcatcaagttctccgtccatgagaagtgactcatccaaagttgatcctttaaacttctca
gatgatcccggatcactgctaaaaaggattcaacacatcaactctcactgggaccagtgt
gcttcatttggacagcctcccagttcccaatgtggaaaaagacctgaaaccagagttgca
cttcaaataactaataagaactgccttcttcaagcagatgttggtctgcaggaggttcta
aaggaacataagatcagtctgaggaagagatgtgaatgtgtgactgaaggaagtgatgaa
acaggaagtacaaccctcctcaacaggatctacactgatctctacatcacagagggacag
agtgaagaggctaatacccaacatgaggtgaagcagctggagacagctttcaagatccag
aacttccatgactctccaatcaggtgccatgacatctttaaatccttccctgaccaacat
ggagccatcagagtggttctgaccaatggtgtcgctggtgttggaaaaaccttctcagtg
cagaagttcactctggactgggcagagggtttggagaaccaagatgtcagtgtggtggtt
ctgctttcgttcagggagctaaacttgatcaaagatgagcagcacagtcttctcacgctg
ctccatgttttccatccaaccctccagaagctcccagcagagcagctggctgtctgcaaa
cttctctttatctttgatggcctggatgaaagcagactttcactggacttcaacaacagt
cagctggtttctgacgtcacacagaagtcatcagtcaacgttctgctgacaaacctcatc
aaggggaacctgcttccctcggctctcatctggataacttccagacctgcagcagccaat
cagatccctccttcatgtgtttccagggtaacagaagtacgaggcttcactgatgcccag
aaggaggagtatttcaggaagaggttcagtgatgaagagctgtccagcagaatcatctcc
cacatcaagacctccaggagcctccacatcatgtgtggaatccccgtgttctgctggatc
actgctactgttctggagaacatgttgacctcagagcagagaggagagctgcccaagacc
atgactgacatgtactcacacttcctgctggtccagacaacgaggaagaagaacaagtac
catggaggacatgagacaagtccacaagagctgatggaggctgacagggaagttcttctg
aagctggggaggctggcgtttgaacatctggagaaaggaaacatcatgttctaccaagaa
gacctagaacagtgtggtctggatgtcacagaggcctcagtgtactcaggagtttgtaca
gaaatcttcaaaagagagagtgtgatcttccagaaaccagtctactgctttgttcatctg
accatccaggagtttctggctgcagtctacatgttccactgtttcaccaatacgaacaca
gaggtggtggagaagttcctggatgacatcaaaaaaggaaaacccagcgactcaaatcca
tcatcaagttctagaatcagtgatcgtcctagtcaatctatagatctgtttctggatcaa
gttctgagaagatccctaaaaatcctgaatggccacatggatttgtttgttcgtttcctt
catggctttgctttgccctgtaaccagagacttttggcaggcctggtgactcagactaag
accagtccagatgtcatacagagagtcatcaacaacttgaagaagacaagctctgaagac
atttctcctgacaaaggcatcaacatcttttactgtctggtggaaatgaaggaccattca
gtttatcaggagatccaagagttcctgaagtcaaagaacaaatcaaagtgtgaactttct
gagatccattgctcagctctggcctccattctgcagatgtcagaagaggttctagacgaa
atggaactagtgaggtacaacacgtcaaaggaaggacggcgcagactcatcccagctgtg
aggaactgcaggaagtttgtactgacgttctgtgacctgtctgagactcactgtgaagtt
gtggcttcagctctgaagtccaacccctcccatcttgcagagcttgacctgagctatgac
ggcttgccccattcaggactgaagcttctgtttgctggactagaaagtccaaactgcaga
ctagagaatctgaggctgatcaactgcagtttatcagagagcagtggagcacatctggcc
tcagctctgaagtccaacccctcctacatgaaacatctggatctgagcagcaacaggctg
aaggatgcaggtgtggagcagctgtgtgggtttctgaagagtccttactgcaaactccaa
acactgagactcaggaactgcagcttgactgggatcagctgtttgtctttggtttcggct
ctggggtccaacccgtcccatctggcagaactggacctggttgacaacaggctgaaggac
ccagatgtggagcagctgtgtgacctggcagccagttcagacttcagactggaaactatc
aaatggaaataa
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