Xiphophorus maculatus (southern platyfish): 102222366
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Entry
102222366 CDS
T02923
Symbol
ift140
Name
(RefSeq) intraflagellar transport protein 140 homolog
KO
K19672
intraflagellar transport protein 140
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xma03037
]
102222366 (ift140)
Cilium and associated proteins [BR:
xma03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
102222366 (ift140)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Coatomer_WDAD
ANAPC4_WD40
Clathrin
PPR_1
Motif
Other DBs
NCBI-GeneID:
102222366
NCBI-ProteinID:
XP_023196876
Ensembl:
ENSXMAG00000019061
LinkDB
All DBs
Position
10:2195510..2233412
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AA seq
1442 aa
AA seq
DB search
MAVYFDHRIEAPDRSNLPSHLTWHSTLPILAVASSGPAAGGSVDLYLQQGECVKSCHVDR
AQPAAVLRWHPAKPVLVLGWESGEVVLLTHPSGDQTVLPAVHTARIALLEWSGSGSRLVT
GDQNGALAVWKLDARGRLLGNYLVKHDYNKPLTCCIFKPASPGVDVAMLARASVSGDESA
LDMFSWKGAPLKMGPQEGLGFYVSSSDGKVHAVDEQGKTSPLLSEDGSIRKLFYLEKRGV
LVVVTDTLMLSQYTLRPEGGAHEFMKVKLSSTAGQNVDIIWTENSLLITATGEPVIKIWD
LERDENYVLSLDETLGFKKGEMINCVSYCAAKEILAAGTSKGRIAMWKTAMQPMSSSSYR
ADAKALWKLQTPTEIHGNVTELQWGSNQNLLAANNSRTVLILSEHVMSAHFGQQVAAVQL
APTQLSITNFSRGETLPLQCDMHIRGVCVSKDSVTVWNGKHISVFELSGTALHVTGSFPC
DSHIVAVHDENLYTVEPNRVQIRTPQGTVKQLLTFSRAEGNPVLLDVCQSYLAVGTDTAH
IRVYDLSRRDAKAHCGAKNLSDHISDLGALRSIKCNASGSQVSLLASQVNGRPDHKVYFY
DIEMDTVTHFDFFTGRPSTGVSPPDESDKQMFQENEISGRFPVAHCWDESEPRLFVCETA
PVGSEKSANAFSDLEDVSVVTLFCTQEHGLLLQDCFSRPSGLQALLALDVPYYYFTCKPG
EENPEVSPPSDQPIRAAPSSPPVMASRRPLRDFVGLEKCEKGTRDAMLNFSFYLSVGDMD
EAFKSIKLIKSKAVWENMARMCVKTRRLDVARMCLGNMGNARAAKAVKEAEAESEPEARV
AMLAIQLGMLEDAEKLYKSCHRYDLLNAFYQAFSEWPRALETAEAHDRIHLRTTYYNYAK
YLESMGHKNLALAYYEKSDTHRVEVPRMLQDDTVSLEVYVTKAKDKNIYKWWAQYLESQS
NMERALLFYERAQDYLSLVRVHCYLGNIPEASQIANNTGDRAASYHLARHYEGHEDIKQA
VHFYTRAQAYNNAIRLCKENSLDDQLMNLALLSNPEDMMEAACHYEEKGKHLDRAVALYH
KAGYVSKALELAFATEQFAALQLIAEELNENSDPALLARCSDFFVQHSQYEKAVELLAAA
KKYPEAVELCLTHNLTITEDLAERMTVTDSKDLTEEAGKALLEKIADCCMSQGSYHLATK
VYTQAGNKHRAMKALLKSGDTDKIAFFANVSRQKELFIMAANYFQSLDWRKNPKNLKRII
EFYTKGKAPDLLGGFYEACAQVEIDDYQNYEKALDALMEAFKCLSKAKDGSSGQQEVRLA
DLQHKIVLIKKFVHIRRLYSEDPDEAVRMCEALLEEPELNPAVRIGDAFGFLIDHHCQQG
RLQTAYQKLEELQKLLPSQSIRYYISQASLDALQKEMGFPLESGDHKHVLREDDEVEEDL
TV
NT seq
4329 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtatttcgaccaccgcatcgaagcccccgacagaagcaatctgccgtctcat
ctgacctggcactccacgcttcccatcctggctgtggcgtcgagcggccctgctgctggt
ggcagcgtggatctttacctgcagcagggtgagtgtgtgaagagctgccatgtggaccgg
gcccagccggccgccgtgctgcgctggcatcccgcaaagccggttctggttctgggctgg
gagagcggggaggtggtgctgctcacgcatccgtccggagatcagaccgtgctgccggcc
gttcacacggcccgcatcgcgctgctggagtggagcggctccggaagccgcttggtaacc
ggagatcagaatggagctctggccgtgtggaaattagatgccagagggcgacttttagga
aattacctcgttaagcacgactacaacaaacctttaacctgctgcattttcaaacctgcc
tctcctggggtcgatgtggcgatgttggcgcgggcgtcggtgagcggagacgaatcggct
ctggacatgttcagctggaaaggggcgcctctgaagatgggtcctcaggagggactgggc
ttctacgtcagcagctccgacggaaaggtccatgctgtggacgaacagggcaagacgagc
ccgctgctgagcgaggacggctccatcaggaagctcttctacctggagaagagaggtgtg
ctggtggtcgtcacggacaccctgatgctgtcgcagtacacactgagaccagaaggggga
gctcacgagttcatgaaggtgaagttgagcagcacagccgggcagaacgtcgacatcatc
tggaccgagaacagcctcctcatcacagcgacaggcgaaccagtcatcaaaatttgggac
ctggagagagatgagaactacgttctatctctggacgaaactctgggatttaagaaggga
gagatgatcaactgtgtttcctactgcgcagccaaagagatcctggcagctggaacctcc
aaaggccgcatagcgatgtggaagacggcgatgcagccgatgagcagcagcagctacaga
gccgacgctaaagccctgtggaagctgcagactcccactgagatccatggaaacgtcacc
gagctgcagtggggctccaatcagaacctgctggccgccaacaactccagaacggttctg
atcctcagtgagcatgtgatgtcggcgcacttcggccagcaggtggcagcagtgcagctc
gccccgactcagctcagcatcacgaacttcagcagaggagagacgcttcctctgcagtgt
gacatgcacatcagaggagtgtgtgttagcaaggactctgtgacggtctggaacgggaaa
cacatctctgtctttgagctctcagggacggctctgcatgttacaggatcatttccttgt
gattcccacattgttgctgttcatgacgagaacctttacaccgtggaaccaaacagagtc
cagatccgaacacctcaggggacagtgaagcagctgctaactttctcccgggccgaggga
aaccccgtgctgctggacgtgtgccagtcgtacctggcagtaggaacagacacggcacac
atcagagtttacgacctctccagacgagacgccaaagctcactgcggcgctaagaatttg
tccgaccacatcagcgacctcggcgccctgaggtccatcaaatgcaacgccagcggcagc
caagttagcctgctagcctctcaggtcaacgggcgacccgatcataaagtatatttctac
gacatcgagatggacaccgtgacgcactttgacttcttcaccggcagaccgtccactggc
gtctctccacctgatgaaagtgataagcaaatgtttcaggaaaatgaaatcagtggccgt
tttcctgtggcccactgctgggatgagagcgaacctcgactctttgtctgcgagaccgcg
cctgtcggctcggagaaatcagccaacgctttctcagatttggaggacgtgtcagtggtg
acgctcttctgtacgcaggaacatggactcctgcttcaggactgcttctccaggccttca
ggccttcaggccctcctcgccctggatgtgccatactactactttacctgcaagccaggt
gaggagaacccagaagtgtctccaccgtcagatcagccaatcagagcggctccttcttcg
ccccccgtcatggcgtccaggcgtcctctcagagactttgtgggcctagagaagtgcgag
aagggaacgcgggacgccatgttgaacttcagcttctacctgagcgtgggcgacatggac
gaagccttcaagtccatcaagctcatcaaaagtaaagcggtgtgggaaaacatggcacgg
atgtgtgtgaaaacccgccggctggacgtggcccgaatgtgcctggggaacatggggaac
gccagggcagcgaaagccgtgaaggaggcggaggccgaatccgaacccgaagcccgggtg
gccatgttggccattcagctgggcatgctggaagatgcagaaaagctgtacaagagctgt
catcgctacgacctgctgaacgccttctatcaggccttcagcgaatggccgcgagctctg
gagacggccgaggctcacgaccgcatccacctgcgcaccacctactacaactacgccaag
tacctggagtccatgggccacaagaacctggcgcttgcttattatgagaaatcagacact
caccgagtcgaggttcccagaatgctgcaggatgacacggtgtcgctggaggtatacgtc
accaaagccaaagataagaatatctacaagtggtgggcccagtacctggagagccagtcc
aacatggagagagcactgctgttctacgaacgcgctcaggattacctctctctggttcga
gtccactgctacctgggcaacatcccagaggcgtctcagatagccaacaacacaggtgac
agagccgcatcgtaccacctggccagacattacgagggtcacgaggacatcaagcaggcg
gtccacttctacacgcgggcccaggcctacaataacgccatacgactctgcaaggagaac
agtctggatgaccagctgatgaacctggcgctgctcagcaacccggaggacatgatggag
gccgcctgccactacgaggagaagggcaaacacctggaccgggccgtggcactctaccac
aaggccggttacgtctccaaagcgttggagttggcgttcgccaccgagcagtttgctgcg
ctgcagctcatcgcggaggagctgaatgaaaactccgaccctgcgctcctcgctcgctgc
tccgacttcttcgtccaacattcccagtatgaaaaggcggtggagttactggcagcggcc
aagaagtatcctgaggcggtggagttgtgcctgacccataacctgacgatcacagaggac
ctggctgagaggatgacggtgacggattccaaggatctgacggaggaggccggaaaggct
ctgctggagaagatcgccgactgctgcatgagtcagggcagctaccacctggccaccaag
gtgtacacacaggccggcaacaagcacagggccatgaaggcgctgctgaagtcgggcgac
acggataaaatcgctttctttgccaacgtttctcgtcagaaggagcttttcatcatggcc
gccaactacttccagtccctggactggcgcaaaaacccaaagaacctgaagcgaatcatt
gagttttacactaaaggaaaggcgccggacctgctgggcggcttctacgaagcttgtgct
caggtggagatagatgattaccagaactatgaaaaggctctggatgctctgatggaggcg
tttaagtgtctgtccaaagcaaaggacggttcctctggacaacaggaagtgaggttagcc
gacctgcagcacaagatcgtcctcatcaagaagttcgtccacatacgcaggttgtactcg
gaggatccagacgaggcagtgaggatgtgtgaagccttgctggaggaaccagagttgaac
cccgccgtccggatcggagacgcgttcggcttcctgatcgatcatcactgtcagcaggga
cgcctgcaaacggcgtaccagaagctggaggagctgcagaagctgctgccgtctcagagc
atcaggtactacatcagccaggccagcctggacgcgctgcagaaggagatgggcttccct
ctggagagcggcgaccacaaacacgtcctgcgggaggacgacgaggtggaggaggacctg
acagtctga
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integrated database retrieval system
