Xiphophorus maculatus (southern platyfish): 102223526
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Entry
102223526 CDS
T02923
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3-like
KO
K04957
hyperpolarization activated cyclic nucleotide-gated potassium channel 4
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xma04040
]
102223526
Ion channels [BR:
xma04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
102223526
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GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
GAS
Motif
Other DBs
NCBI-GeneID:
102223526
NCBI-ProteinID:
XP_023200679
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Position
2:complement(6338274..6364470)
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AA seq
1144 aa
AA seq
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MERFQSSMRKRLYSLPQNIVQKPTVTDSEGDSGDKDTRRKSIRLKHLSSLSPASSCRSVE
EARSEDLERDVSGLKTNLNGDCGFFRSSISSITGRHPAGSDPAEQRYLLPETDAGASESS
PGEPGDQDRAAGGLQVGAPGQPSVFDQSTFIKLEGADQVIPEDDRLYQAGFMHRQFGAML
QPGVNKFSLRMLGSERAVEHERERVKSAGFWIIHPYSDFRFYWDLTMLLLMVGNLIIIPV
GITFFKDEHTPPWIVFNVVSDTFFLLDLVLNFRTGIVKEDNTEIILDPHQIKVKYLKSWF
VVDFVSSIPVDYIFLIVETRIDSDFYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWE
EVFHMTYDLASAMVRIMNLIGMMLLLCHWDGCLQFLVPMLQDFPPDCWVTRNKMVNDTWG
QQYSYALFKAMSHMLCIGYGLYPPIGMADVWLTILSMIVGATCFAMFVGHATALIQSLDS
SRRQYQEKYKQVEQYMSFHKLPADMRQRIHDYYEHRYQGKMFDEESILEELNEPLREEII
NFNCRKLVASMPLFANADPNFVTSMLTKLRFEVFQPGDYIIREGTIGKKMYFIQHGVVSV
ITKSSKDTKLTDGSYFGEICLLTRGRRTASVRADNYCRLYSLSVDNFNEVLEEYPMMRRA
FEAVALDRLDRIGKRNSILQHKVQHHQSSGTLNLHETEIIQRIVQHDRDMAQCTQLIQSS
TAQSLNVPIAPPSPTPLIWTPLVQAPLQAAAATTPLALALAHHSQLPPILFHSPLVPGSS
MKDHSRRVHMGGTAFSSFGSVPGSPVSSAKPRSVVETPTLGFSLAQHHSTAVLSPTVMSQ
PVFTSSLQPTPQPLYQPPHCTPVFPSYTCSAQLHPQPFLGAMAAPPQPLGLLQQGAPGKI
SGRFPAPAISPLICSSVNPILSQLRQPCHPSSLNRATSTSSNVNLPHFPIITSRQPPVGI
NPPPSAAGVSGVAASLAQHTLAGLQSVFLPQVLPEHSALASLAQYGSGEASPCYTPPLRS
PATQSRTVHHAEPPGAISFQSSALRETAESSADLFTQEIKTISGSHSYLHQERPSVVSGS
SEGAAGGFPSPMAVNKPYTAIPGQGGPVSRTQSGPEPWNRPAGNQSPAKVLDSEQKQSKL
PSNL
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atggaaaggttccagtcttccatgcgcaaacggctctacagcttgccgcaaaacattgtg
caaaaacccacagtgactgacagtgaaggagacagcggcgacaaggacaccaggaggaaa
agtattcggctaaaacatttgtcctctctgtctcccgcaagcagttgcaggagcgtcgag
gaggccaggagcgaagacttggaaagggacgtttcagggctgaagaccaacttgaacggg
gactgtggctttttccggagcagcatctcttccatcaccgggaggcatcctgcgggctcg
gatccagcggagcagcggtacctcctgccggagacggacgccggggccagcgagagttca
cccggggagccgggggaccaggaccgggcggcgggcgggctgcaggtcggcgcacccggg
cagccgtccgtgttcgaccagtcaactttcatcaagttggaaggcgcggaccaggtcata
cccgaagatgaccgactgtaccaggccggcttcatgcaccgacagttcggggcaatgctc
cagccgggagtcaacaagttttccctgcggatgctcggcagcgagagggccgtggagcat
gagagggaacgcgtgaagtccgcaggcttctggataatccacccgtacagtgattttagg
ttttactgggacctgaccatgcttctgctgatggtgggaaacctcatcatcatccccgtg
ggaatcaccttcttcaaggacgagcacacgccgccgtggatcgtcttcaacgtcgtgtcg
gacacctttttcctcctggacctcgttctcaactttcgcaccggcatcgttaaggaggac
aacacggagatcatcctggacccgcaccagatcaaagtcaagtacctgaagagctggttc
gttgtggactttgtctcctccatacctgtggactacatcttcctcattgtggaaactcgc
atagactctgacttttacaagacggcccgggccctgaggatcgtccggttcaccaagatc
ctcagtctgctgcggctgctgcgtctctccagactcattcgctacatccaccaatgggaa
gaggtctttcacatgacgtacgatcttgccagtgccatggtgcgaatcatgaacctgatt
ggcatgatgctgctgctgtgccactgggacggctgcctgcagttcctggtgccgatgctg
caggacttccctccggactgctgggtcacccggaacaagatggtgaatgacacctggggt
cagcagtactcctatgccctgttcaaagccatgagtcacatgctgtgcatcgggtacggc
ctgtacccgcccatcggcatggccgacgtttggctcaccatcctcagcatgatcgtgggc
gccacctgctttgccatgtttgtgggtcacgccacagctctgatccagtctctggactcc
tcaaggaggcagtatcaagaaaagtataagcaagtggagcagtacatgtccttccacaag
ctccccgctgacatgaggcagagaatccacgactattacgagcaccgttatcagggcaag
atgttcgacgaggagagcatcctggaggagctgaatgagccgctgcgagaggaaatcatc
aacttcaactgccgcaaactggtagcctccatgcctctgttcgccaacgccgaccccaac
tttgtcacctccatgttgaccaaactgcgcttcgaggtcttccaaccgggcgactacatc
atcagggagggcaccatcgggaagaagatgtacttcatccagcacggcgtcgtcagcgtc
attacgaagagcagcaaagacaccaagctgacggacggctcttattttggagagatctgc
ttgctgactcgaggcagaaggacagccagcgtgcgagcagataactactgccggctgtac
tctctgtctgtagacaacttcaacgaggtgctggaggagtatcccatgatgagaagggcc
tttgaggccgtcgccctcgaccgcctggaccgaatcggaaagaggaactcgattctgcag
cataaagtccagcatcaccaaagctccggcacattaaacctccacgaaacagaaatcatc
caaagaatcgtccagcacgaccgggacatggcccaatgcacgcagctgatccaaagcagc
actgcacagagtctgaacgtccccatcgcgccgccgtcccccacccctctcatctggacg
ccgctggtccaggcgccgttgcaggctgccgctgccaccacgccactggctttagccttg
gcccatcactcccagctgcctcccatcctcttccatagtcctctggttcctggttcctcc
atgaaggaccattccaggagggtccacatgggagggaccgccttcagcagctttggttca
gttcctggctccccggttagctctgctaaacccagatctgtagttgagacgccgacgttg
gggttctctttggcacagcatcactccaccgcggttttatcgcccacggtgatgtcgcag
cccgtctttacgagcagcctacagcccacgccgcagcctctttaccagcctcctcactgc
accccagtcttcccctcctacacctgctccgctcagctccaccctcagccgttcctcggt
gctatggccgctccgcctcagcctctaggtttgctacagcaaggggcgccggggaagatt
tcgggaagatttccagccccggccatcagccctctgatctgcagctcggtgaaccccatc
ctgagccagctgcggcagccatgccacccctccagcctcaacagagcaaccagcacatcc
agcaacgtcaacctcccacatttccccatcataaccagcaggcagccgccggtggggatc
aatccgccaccgtctgcggccggcgtaagtggggtggccgcctctctggcacagcacacc
ctggcgggactgcagtcggttttcctcccacaggttctcccagagcactcggccctcgcc
tccctggcgcagtacggctccggagaggcctcgccgtgctacacgccgcctctccgcagc
cctgccacacagagtcggacggttcaccatgccgagccgcccggcgccatcagctttcag
agctctgctctgagagaaacagcagagtcctcggcggatctctttacccaggaaataaag
acaatctcaggctctcacagctatttacaccaggaaaggccttcggtggtgagcggctcc
tcagagggggcggcggggggcttcccttcccccatggcggtcaacaaaccctacaccgcc
atcccgggtcagggtggtcccgtcagtcggacacaatcagggcctgagccttggaatcgg
cccgctggcaatcagtctcccgctaaagtgttagacagtgaacagaaacaatccaagctt
ccctccaacttgtga
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