Xiphophorus maculatus (southern platyfish): 102223755
Help
Entry
102223755 CDS
T02923
Name
(RefSeq) thyroid hormone receptor alpha isoform X4
KO
K05547
thyroid hormone receptor alpha
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
102223755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xma03000
]
102223755
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
xma03310
]
102223755
Transcription factors [BR:
xma03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
102223755
Nuclear receptors [BR:
xma03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
102223755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
102223755
NCBI-ProteinID:
XP_005811869
Ensembl:
ENSXMAG00000010829
LinkDB
All DBs
Position
16:complement(23211738..23279864)
Genome browser
AA seq
401 aa
AA seq
DB search
MHILQPYCINRWPDVPKRKRKNSQCSLKSMSGYIPSYLEKDEPCVVCGDKATGYHYRCIT
CEGCKGFFRRTIQKNLHPSYTCKYEGCCIIDKITRNQCQLCRFKKCISVGMAMDLVLDDS
KRVAKRRLIEENRERRKREEMVRTLQMRPEPDSAEWELIRMVTEAHRNTNAQGSSWKQKR
KFLADDIGHGQLMLTSDGDKVDLEVFSEFTKIMTPAITRVVDFAKKLPMFSELPCEDQII
LLKGCCMEIMSLRAAVRYDPESETLTLSGEMAVKREHLKNGGLGVVSDAIFDLGKSLAQF
NLDDSEVALMQAVLLMSSDRSGLMSMEKIERCQEAFLLAFEHYINYRKHNIPHFWPKLLM
KVTDLRMIGACHASRFLHMKVECPNELFPPLFLEVFEDQEV
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgcatatcctgcagccgtactgcattaacagatggccagatgtgccgaagagaaagagg
aaaaacagccagtgctccctgaagagcatgtctgggtacatccccagctacctggagaag
gacgagccgtgcgtggtgtgtggggacaaggccaccggctaccactaccgctgcataacc
tgcgaaggctgcaagggtttcttccgcaggacaatccagaaaaatctccatccttcttac
acctgtaaatatgaaggctgctgcatcattgacaagatcacccgcaatcagtgccagctg
tgcagattcaagaagtgcatctctgtgggcatggccatggacttggtgctggacgacagc
aagcgtgtggccaagcggcgcctcatcgaagagaaccgagagcggaggaagcgggaagag
atggtgcggacgctgcagatgaggccggagccagacagcgcagagtgggagctgattagg
atggtgactgaggcgcaccggaacaccaacgcccagggctccagctggaaacagaagcgc
aaatttctggcggacgacatcggccacggtcagctgatgctcacttcagacggagataag
gtcgacctggaggtcttcagtgagttcaccaagatcatgacccctgccatcacgcgcgtt
gttgactttgccaagaaactgcccatgttttcagagctgccttgtgaagaccagatcatc
ctgctgaagggttgctgcatggagatcatgtcactgcgcgccgccgtgcgctacgacccc
gaaagcgaaacgttgacgctcagcggtgagatggccgtaaaacgcgagcacttgaaaaac
ggcgggcttggggttgtttcggacgccatatttgacctgggcaaaagcctggcacagttc
aacttggacgactccgaggtggcactgatgcaagcggtgctgctcatgagctcagatcgg
tcgggtctgatgagcatggagaagatcgagcggtgccaggaggccttcctgctggcgttc
gagcactacatcaactaccgaaagcacaacattccccacttctggccaaagctcttgatg
aaggtcacggacctgcggatgatcggcgcctgccacgccagtcgcttcctccacatgaag
gtcgagtgtccaaacgaactcttccccccactcttcctggaagtcttcgaggaccaggaa
gtgtga
DBGET
integrated database retrieval system
