Xiphophorus maculatus (southern platyfish): 102223795
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Entry
102223795 CDS
T02923
Symbol
rpgr
Name
(RefSeq) X-linked retinitis pigmentosa GTPase regulator
KO
K19607
X-linked retinitis pigmentosa GTPase regulator
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xma03037
]
102223795 (rpgr)
Cilium and associated proteins [BR:
xma03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
102223795 (rpgr)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
102223795
NCBI-ProteinID:
XP_023192386
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All DBs
Position
7:12667543..12686568
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AA seq
1276 aa
AA seq
DB search
MPGRTDADIPETGAIFTFGKSSFANDVPSQFWLKNDRPVEICGGKEHSAVITENGRLLMF
GGNTGGQLGLKIKPDAKKPTSVKALKPEKVKLVACGRDHSLVCTFSVQHCVCGAGRNQKG
QLGLGHRENTKSFQLLRPFCESAPVKMLAAGSSTSAALTEEGRLFMWGDNSVGQIGLGDK
AFAAEPRELNVGQAVMWVSCGHRHSAFVTAHGGLYTFGESANGRLGVQVGQLANHRVPQQ
VQGIMGSVIQVCCGGEHTVALTEEDVYTFGRGQYGQLGHGTFEFELHLPKPLERFHNSSA
RRIACGENHTAVITNAGLLYTFGDGRYGKLGLQQENFINQFSPTLCTRFLKYSVQSVSCG
GHHTLVLAVPRPAAQSQGVESQKDAAITDFFWESDDPENLFKDSPMDPAAVVPLSALAAR
ARHRKKKSFVELFGELPQTPPRPNSGFLSTSWQTSRNIPNLKQLLKDAPTPTSSPKAAPA
SPLLSPRSQSETRTGRVQIAKELEVRGDQKSGQSSPKDLKAEALTGSNSRKEEELSLKSR
KRKARVTSQDRQSIKNGDKDGLKYAKSTTGETEGRTSEKQNLLEEKKKKKEEEPKVRQRK
RGKEDGADVDSEGNSKAKPRIKTTEAPSQTSSHHEEASEVSSSAVSSQSPTRARALSVSR
AKSLQSSDRPAAETLAPETQRKENEDLQEGKQTWGEILSDAAFLLPAAGVAGAAIGLLSE
AVTHVEAFRADSDRAASPEPETPKVKQFAKQSAIMHPSFSAMLHSDSEERDDSTQKDAQM
SILSDLGNDAHEEEFNDPSEQEPAEQIRKEETFENKEGEEEGSEEDDDSKMTETNTGDEE
QKEDEEALGSDVESKSEDEEGESSEAAGESEPGDDDDDEQDSESEGEESEGKTSSSVQEE
GEESNKSDTKDAESEDEESSMETGEGVSHSEASEAAEEDEGGSEEQSDDESKGEEDSEVS
EDEEEKSGEGSKREHSESEEEENEEEEEEGAEGSDTAVSEEEESEEPRQSDEEQETEKEE
SGGEGEEVSEEEEEEGELSSSDEEAEQEATQDEEEGEGENTEEENEEEEQGSTGNEEDEG
TDEESKSEEEEQSMEEDEEGAEESISASEEEEESEDDHEEEEEGTEGSISASEEEEASEE
KGKESEEEEEIDEEEEEEEEAEEEEEEEDGNQEQDEEEEEEEEQTEKVEVEEEEEEEEQM
EEDEEEEEEEEEEKEEGEEEEDEEEVQETAKKQKKREKSTGSKGAEPPKQRDTEEKKPEE
SKQFWNDVLPQYLDLQ
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atgcctggccggaccgatgcagacatacctgaaacaggagccatcttcacatttgggaag
agcagctttgctaacgatgttcccagtcagttctggttgaaaaatgaccgtccagtggag
atatgcggtggcaaagagcacagtgctgtgatcacagaaaatgggaggttgctcatgttt
ggtggtaatactggtggccaactgggactgaagataaaaccagatgccaaaaaacccacc
tctgtgaaagcattgaagcctgaaaaggtgaagcttgtggcctgtgggagagatcactca
cttgtctgcacattttcagttcagcactgcgtctgtggggctggcaggaaccagaaggga
cagctcggcttgggccacagggagaacaccaaatcctttcagctgctgcgtccgttttgt
gagtcggcaccggtcaaaatgctcgctgctggcagcagcacttcagctgccttaacagag
gaagggaggctgttcatgtggggagacaactccgtgggtcaaatcggtttaggggacaag
gcgtttgcagcagaacctagagagctgaatgtggggcaggcggtgatgtgggtatcttgt
gggcatcgccactcagcgtttgtgacagcgcacggtggactttacacctttggtgaaagt
gcaaatggacgactcggggtccaggtggggcagctggctaatcacagagtcccccagcaa
gtgcaaggcattatgggaagtgtcattcaggtgtgctgtggaggggagcacactgtggca
ctaacagaggaggatgtgtacacgtttggcagaggtcagtacggtcagctgggccacggg
acgtttgagtttgaacttcatttgccaaaaccactggagcgcttccacaacagcagcgcc
agacgaatcgcctgcggagaaaaccacactgctgtgattacaaatgctggactgctctac
acatttggtgatggccgttatggaaaactggggttacagcaggagaacttcatcaaccag
ttcagcccaacactgtgcacccgtttcctgaagtacagcgtgcaatcagtgtcctgcggt
ggtcaccacactctggttctggctgtccccagaccagcagcacagagtcagggcgtagag
tcacagaaggatgccgcaattacagacttcttctgggagtcagacgaccctgaaaacctc
ttcaaagactctccgatggacccagctgcagtcgtccctctctcagcgctagccgctcgg
gctcgccacagaaaaaaaaaaagctttgtggagctgtttggagagttgcctcagactccc
cctcgtcctaattctggcttcctcagcacctcctggcagacatccagaaatatcccaaac
ctgaagcagcttctaaaggatgctcccacccccacctcctcccccaaagcggcaccagca
agcccgcttttatcccccagatctcagtccgaaaccagaactgggagagttcaaattgcc
aaagagctagaggttcgtggagaccagaagagtggccaaagctcgcccaaagacctcaaa
gcagaggctctgacaggctccaactccagaaaggaagaagagttgtcactgaaaagcagg
aagagaaaagcacgagtcacatctcaagaccgtcaaagcatcaaaaacggtgacaaggat
gggttaaaatatgcaaaaagcacaacaggtgaaactgaaggcagaacgtcagaaaaacag
aatttacttgaagagaagaagaaaaagaaggaagaagaacctaaagttagacagagaaaa
agagggaaagaagacggtgctgatgtggactcggaaggtaacagcaaagccaaacccagg
attaaaacaaccgaggctcccagccagacctcttcacatcatgaagaggcttctgaagtc
tcaagcagtgcagtttcctcacaaagccccacaagagccagggcgctttctgtcagcaga
gctaaatccttgcaatcctctgaccgtcccgccgcggaaacacttgcacctgaaactcaa
aggaaagagaacgaagacctgcaggaaggaaaacagacgtggggagagattttgagcgac
gcggcatttcttctacctgctgcgggggtcgcaggtgcagctatcggcctcctgagcgag
gcagtgactcatgtggaggctttccgggccgacagcgacagagctgcctctccagaacct
gaaacaccgaaagtcaaacagttcgcaaagcagagtgcaattatgcacccgtccttctct
gcgatgttgcattctgattcagaggaaagggacgacagcacacagaaggatgctcaaatg
agcatcttgtcagatttaggaaacgatgcacatgaggaggaattcaatgatccttcagag
caggaaccggctgagcagatcaggaaggaagaaacttttgaaaataaagaaggagaagaa
gaaggctctgaagaggacgatgattccaagatgactgagacaaacaccggtgatgaagag
caaaaagaagatgaagaagcgttgggaagtgacgtggaaagcaaaagcgaggatgaggaa
ggagaaagcagcgaggctgcaggggagagtgaacctggagacgatgacgatgatgagcaa
gatagtgagtcagaaggagaggagagcgagggaaaaacaagctccagcgttcaggaggaa
ggtgaagaaagtaacaaaagtgacacaaaggatgctgaaagtgaggatgaggagagcagc
atggaaacgggtgaaggagtgagtcactctgaggcgagtgaggcagccgaggaggacgaa
ggtggaagtgaagagcaaagtgatgatgagagtaaaggagaggaagatagtgaggtgagt
gaggatgaagaagaaaaaagcggtgaaggatccaagagagagcatagtgagagtgaagaa
gaggagaatgaggaagaagaagaggagggcgcggagggaagtgacacggcggtgtctgag
gaagaagaaagcgaggaaccgaggcagtctgatgaagagcaggaaactgagaaagaggag
agtggaggagagggggaagaagtcagtgaggaagaggaggaggaaggagagctttcttcg
agtgacgaagaagctgaacaggaggctacacaggatgaggaggaaggagaaggggagaac
acagaggaggaaaatgaggaagaggaacaggggagcacagggaatgaggaagatgaagga
acggatgaagagagcaaaagtgaggaggaagagcaaagcatggaagaagatgaggaagga
gcagaggaaagtatctctgcttctgaggaagaggaagaaagtgaagatgaccatgaagaa
gaagaggaaggaacagagggaagtatctctgcttctgaggaagaggaagcaagtgaggaa
aaaggaaaggagagtgaggaagaggaagaaatagatgaggaggaggaggaagaagaagaa
gcagaggaagaggaggaggaagaagatggaaatcaagaacaagatgaagaagaggaggaa
gaagaagaacaaacagaaaaagttgaagtagaagaggaggaggaggaggaagaacaaatg
gaagaagatgaggaagaggaggaagaagaggaggaggaaaaagaagagggtgaagaagaa
gaagatgaggaagaagtgcaagagacagcaaagaaacagaagaagagagagaaatcaaca
ggctcaaagggggcggagccacccaaacagagagacacagaggagaagaaaccagaagaa
tccaagcagttctggaacgatgttctgcctcagtacctggacctgcaatga
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