Xiphophorus maculatus (southern platyfish): 102223967
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Entry
102223967 CDS
T02923
Name
(RefSeq) collagen alpha-1(X) chain-like
KO
K19479
collagen type X alpha
Organism
xma
Xiphophorus maculatus (southern platyfish)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
102223967
NCBI-ProteinID:
XP_023208766
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Position
19:16743291..16747688
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AA seq
647 aa
AA seq
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MDLRVASILLLIVASAAATGKGYVVKKVVPMNVKSHVVSVAGEPGPPGEPGPEGPQGPPG
SPGQDGVGYSGPQGPPGPPGQPGRSIAGKPGTPGGPGKPGIPGAPGERGDTGATGLQGPR
GVPGSPGSPGPAGLSATGKPGPSGLPGAMGPRGEPGLKGHPGVPGLPGAKGDRGIGAPGP
QGETGPQGPMGPTGATGAPGIGRPGKPGTNGEPGKSGSPGRDGSSGPMGPQGPKGHTGAP
GIGLPGKSGENGAPGLPGPAGLKGHQGPAGAPGAPGVPGYGKPGANGEKGERGASGSPGA
TGPKGEQGPTGYTGATGATGSMGPVGPQGERGFPGATGPTGLKGDTGPSGPQGPKGHKGD
QGAQGFQGKQGYPGAAGPPGPRGATGPAGDKGDGGAPGTPGAPGIPGPAGPKGHTGRPGE
PGASGSDGSPGQRGPAGPQGPSGATGPKGHPGLPGPPGPAGLAAKGVSGPQGPAGQPGEP
GADGEPGPAGPPGPPGPPGEVVFEKGMGLSEVMVKSSVSAFTAVLATPYPAAGTPIKFDQ
IVYNAENHYDPESGIFTCHVPGIYYFSYSIHVNGAHALVALYKNGQPIMFTYDEYNKGFL
DQMSGSAVLLLDEHDTVYVQIPDEEANGVFAAENVHCSFSGFLIAST
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggacctacgagtggcaagcatcctccttctcattgtggcctctgcagcagccactgga
aagggctacgtggtgaagaaagtggtgcccatgaatgttaagagccacgtggtatcagtg
gcaggtgagcctggtcctccaggtgagcctgggcccgagggacctcaaggcccacctggc
tccccaggtcaggatggcgtaggttattctggacctcaagggccccctggacctcccgga
caacctggccgctccatcgctggcaaacctggaactccaggtggacctggcaaacccggc
atccctggagcacctggtgagaggggagacaccggagccactggccttcagggaccaagg
ggagttcctggttctcctggaagcccaggacctgctggtctgtctgcaactggcaaacca
ggaccttctggccttcctggagcaatgggaccaagaggagagcctggcttgaaaggacat
ccaggtgttcctggacttcctggggctaagggtgatagagggattggagctcctggacct
caaggtgaaaccggacctcagggacctatgggtccaactggagcaaccggtgcaccagga
atcggaaggccaggcaaaccaggtaccaatggtgagccaggaaagtcaggtagcccaggt
agagatggttcttccggccccatgggaccacagggacccaagggacacactggtgcccca
ggtataggtcttccaggtaaatcaggtgagaatggtgcccctggtttgcctggtcctgct
gggcttaagggtcatcagggacctgctggagctcctggtgcccctggagttccaggatac
ggaaagccaggtgcaaatggtgagaagggagagagaggagcctcaggtagcccaggtgcc
acaggtccaaagggagagcagggcccaacaggttatactggggctactggtgccactggc
tcaatgggtccagttggacctcaaggtgaaagaggtttccctggagccactggccccact
ggtcttaaaggtgacacaggtccatctggacctcagggacctaagggacacaagggagat
cagggagcacagggtttccaaggcaagcagggttatccaggggctgctggtcctcctgga
cccagaggggccactggacctgcaggtgacaaaggtgatggtggtgccccaggtacccca
ggtgctccaggtatcccagggcctgctggacccaaaggacacactggtcgccctggtgag
ccaggtgcctctggatctgatggatctccaggtcaaagaggacctgctggaccacaagga
ccttctggtgctactggccctaagggacacccaggtctccctggacctcctggtcctgct
ggtttggctgcaaagggtgtttctggacctcagggtcccgctggtcaacccggtgagccc
ggagctgatggagagcctggccccgctggccctcctggtccccctggacctcctggtgag
gttgtcttcgagaagggcatgggactgagtgaggttatggtcaagtcctccgtgtctgca
ttcactgcagttctggccactccctaccctgctgctggcactcccatcaagtttgaccag
attgtttacaatgctgagaatcactatgaccctgagtcaggcatcttcacctgccatgtt
cctggaatttactacttctcctacagcatccatgtcaatggagctcatgccctggtggct
ctgtacaagaatggccagccaattatgttcacttatgatgagtataacaagggtttcctg
gaccagatgtctggtagcgctgtcctcttgctcgatgagcacgacacagtctacgtccag
atccctgatgaagaggccaatggtgtctttgctgcagagaatgtccactgctctttctct
ggattcctcattgcctcaacgtga
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