Xiphophorus maculatus (southern platyfish): 102224827
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Entry
102224827 CDS
T02923
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xma03021
]
102224827
Transcription machinery [BR:
xma03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
102224827
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
102224827
NCBI-ProteinID:
XP_023206845
LinkDB
All DBs
Position
18:25616242..25645612
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AA seq
2107 aa
AA seq
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MSSCFVPNGASLEDCHSNIFCLADLTGIKWRRFVWQGPTSSPILFPVTEEDPILCSFSRC
LAADVLSVWRRHHTPGRRELWLFWWGDDPSFAELIHNELSSEENGEWESGLSYECRTLLF
KAIHNLLERCLMNRGFVRIGKWFVKPYQKEEKIINKSEHLSCAFTFFVHGDSNVCTSVEI
AQHQPLQRLGEEHLSLAQQSSSPLQVILSPYGLNGTLTSQAFKMSDHPTQKLIEEWRQFY
PICPNLKEVPEDKMEDADWEDDSLAAVEVLVAGVRMVYPSCLVLLPLSDLPAVVPQGSAN
TPGMQSGAHQGQAAHRDSAMSSVTLTPPTSPEEAHTDYQPAQRWLKMSSGSDCYSSNNTL
HGGKIPRRLSSQMVKTVWQEYNINRAGNKRKFTTLTNGTCEEEPDRSGFWDFVEPTHRPS
CNCSRPKNQKQRSSSTSGHPPSSGQPPQPAAKHKLGEKLEKGEKQQRRPQTPFHHRNSVS
EEQSMEPQTQRLCPRPQEEGSYPSLHHADTAPPKAPSLHAHGPPADLVGSPPPPPLSPRP
CDHVDGELTPSGAKNSSTPIHQAFYPPSMEPCLMPQKGSTEEPQPDSAAYPSNYNETFEP
TVFIGSAINPGEDSTHNPWKYFNLPRKKTSNFLTPQLPVDKIRDDSSGGSETVVSVTELM
CNSSHPLKVSQELVRTYAQRRNSHLGSSAGDGEHGDESDPYAFVDGDDEFSITEKRDKVG
PEKDGNKKQKLDNGGTATSSDDGQGQSSCKPSASTSLIHEKDLVVSLSDLEKMFNSDEDE
QEPGSKRAGAGNDDKTNLKEPKPERLDPLSSSDLMMMYPTPPSLDQNGYSPGNSGTKDGL
ETGAGLALLDSSQLSSHFKIEVEEGFCSPKPSEIKDFSFVYKPETCQSIIGCSMYAPLKT
LPSQCLLPVKLPEDCVYTPSWTMGKMELMPPVSTVSLLTKDSNVPSVEPDYNQPFTPQTN
TPFLPGSAPPSNSGPGILPSPATPRFSVPTPRTPRTPRTPRGPSSVQGSLKYENSDLYSP
ASTPSTCRPLSSVEPATVPSIPEAHSLYVTLILSESVMNLFKDCNFDSCCVCVCNMNIRG
SDVGVYLKDNGEDQYPCTCGFSAVANRRFGQSAGLFLEDELDVVGRGSDAGRDTERRFEE
LRGSLKEKPPDELILLLQDQCTNPLAPMAGVEWPKPSAVAVAAPSSFLRVEERDCYNDCY
MALEHGRQFMDNMSGGKVDETLVKSTSLHQWPKCKSADMSKLYSQDVLRVLLSLQPALQD
TIQKKGVRSWGVQGPLTWQQFHKMAGRGSYGTDESPEPLPIPTFLVGYEYDFVVLSPFGL
PYWEKLLLDPFGSQRDVGYVVICPENQTLLRGAKTFFKDLSVMYEACQLGQHKPICKSHP
EGVLTVGSPEGRSMTEQPLSDWFLKMAARESNNEAFHKLKLFAQVCRYDLAPDLSELPLD
SSLLSQRNPTNPAPQTSTSSSASSGLQSTNTTSTNSSQPAQVNSTPPPSSSSSSSSGSQT
NGAMASGKPGSYMPFGTGGLQGSTTQNGPQTNSQSAGGLGDGASSQPQVSAETQESTMER
DKVGKPTDGESHAVSYPPAIVVYIVDPFSYENADKEVHSSTYTVGLLRCFMEMLPFLPAH
IRNAVSVQIVPCQYLLQPVHSGDRHIYSQHLKSLAFSVYTQCRRPLPNSTNFKALTGFGP
GLALDMALKNPERPECLRLYTPSFILAPVKDKQTELGETFGEASQKYNVLFVGYCLSHDQ
RWLLASCTDQHGELLESCIISIDVPNRARRKKSSARRVGLQKLWEWCVGLVQVTSLPWRV
VIGRLGRMGHGELRDWSILLSRTNLQSLSKRLKETCRMCGISAADTPSILSACLVAMEPQ
GSFVIMPDSVSTGSVFGRSTTLNMQTSQLSTPQDTSCTHILVFPTSAMVQVNTNTTEPID
ISFNHINPDGSEGMGIFDLFGSDMDPELINILPNSPTTSPGHSPGHHYHHGEAGKGQGAD
RMESHEEALSILQQPMALGYFISTAKAGPLPDWFWSTCPEAQNQCPLFLKASLHLHVSAV
QSDEFLHSKHSHPLDSNHTSDVLRFVLEQYNALSWLTCNPATQDRRSCLPVHFVVLTQIY
NFIMNML
NT seq
6324 nt
NT seq
+upstream
nt +downstream
nt
atgagttcttgctttgtacctaacggggccagtttggaggactgccactccaacatcttc
tgcctagctgacttgacgggcataaagtggcggcgtttcgtgtggcaggggcccacttcg
tcgcccatccttttcccggtgaccgaggaggaccccatcctgtgcagcttcagccgatgc
ctggcagcggatgtgctgagtgtgtggaggaggcaccacacccccggtcgcagggagctc
tggctcttctggtggggggatgaccccagtttcgctgagcttatccacaatgagctctcg
agcgaggagaatggcgagtgggagagcggcctgtcctacgagtgccggacgctcctcttc
aaagccattcacaacctgctggagcgctgcctcatgaaccgcggcttcgttcgcatcggc
aagtggttcgtcaagccataccaaaaggaggagaagatcatcaataagagcgagcatctg
tcctgcgccttcactttcttcgtccatggcgacagcaatgtctgcacgagcgtggagatc
gcccaacatcagcctcttcagagacttggcgaggagcatctcagcctcgcccagcagagc
tccagccccctgcaagtcatcctcagcccgtacggcctgaacgggacgctcaccagtcaa
gctttcaagatgtcagatcacccgacgcagaagctcattgaggagtggaggcagttttat
cccatctgccccaatctgaaggaggttccggaagacaagatggaggatgcagactgggag
gatgactccctggctgctgtggaggtccttgtcgccggagtcaggatggtgtatccctcc
tgcctggtgctgctccccctgtcggaccttcccgccgtggtccctcagggctcggccaac
actccgggaatgcagagcggcgctcaccagggtcaggcggctcacagagactcggccatg
tcctcggtcactctgactccacccacgtcgccagaagaagcccacacagactatcagcct
gcccagagatggctgaagatgtcttcagggtctgattgctacagctctaacaacactctt
cacggcggaaaaatccctcgcaggctttccagccagatggtgaaaaccgtgtggcaggag
tacaacataaaccgagcagggaacaagaggaagtttacaaccttgacgaacggaacctgc
gaggaggagccggacagaagcggattctgggattttgtggaaccgactcacagaccgtcg
tgcaattgctcgaggcctaaaaaccagaagcagcgatccagcagtacctcaggacacccg
ccgtcttcgggccagccgcctcagcctgccgccaagcacaagctgggtgagaagctggag
aagggcgagaagcagcaacggaggccgcagacgcccttccaccaccgcaactcggtgagc
gaggagcagtccatggagccgcagacccagagactttgcccgaggccgcaggaggagggc
tcgtaccccagcttgcaccatgcggacacggcgccgcccaaagccccctccctgcacgcg
cacggccctcccgcggaccttgttggctcgccgccgccccctcctctcagcccgcgtccc
tgcgaccacgtcgatggcgagctgacgccaagcggtgccaagaattcctctacgcccatc
caccaggcgttctacccgccttccatggagccctgcctgatgcctcagaagggctcgacg
gaggagccgcagccggacagcgcggcctatccctcaaactacaacgagacctttgagccc
acggtgtttattggttcggcgataaatcccggagaagactcaactcacaacccctggaag
tacttcaacctgcccaggaagaaaacctccaacttcttgacgccgcagttacccgtggat
aaaatacgggatgattcgtcaggaggttcggaaacggtggtgtccgtcacagagctgatg
tgcaactcctcgcatcccctcaaagtgtcgcaggagctggtcaggacctacgctcagcgg
aggaacagccatctcggctcctccgcgggcgacggagagcacggcgacgagtccgacccg
tacgccttcgtagacggagacgacgagttcagcattacggagaagagggacaaggtcgga
cctgagaaggacggcaacaagaagcagaagttggacaatggaggaacggcgacttcttca
gatgacggtcagggccagtcgagctgcaaaccttcagcctcgaccagcctcattcacgag
aaggacttggtcgtgtccctcagcgacctagaaaaaatgtttaactctgacgaagatgag
caagagcctggatccaaaagagccggagccggtaacgacgacaagaccaaccttaaagaa
cccaaaccagaacgcctggatcccttgtcgtcgtcagacctgatgatgatgtatcccacc
ccaccctctctggatcaaaacggctactcccccgggaactccgggaccaaggatggcctg
gagacgggggccggtctcgccctgctggacagcagccagctcagcagccacttcaagatc
gaggtggaggaggggttctgcagccccaagccgtctgagataaaggatttttccttcgtc
tacaagccagagacgtgtcagtctatcatcggttgttccatgtacgcccccttgaagacg
ctacccagccagtgtctgctgcctgtcaaactgccagaggactgtgtgtacacgccgagc
tggaccatgggaaaaatggagctgatgcccccagtgtcgactgtcagcctcctcaccaaa
gacagtaacgtccccagcgtggagccggactacaaccagcccttcacccctcagaccaac
acgcctttcctgcccggcagcgccccgcccagcaacagcggccccggcatcctgccgtct
ccggccacgccgcgcttctccgtgcccaccccgcgcacgccacgcaccccccgcacgccg
cgcgggccctccagcgtccagggctcgctcaagtacgagaactctgacctctactcgccg
gcgtccacgccctccacctgccggccgctcagctccgtggagccggccaccgtgccatcc
atcccggaggcccacagcctctacgtcacgctcatcctctccgagtcagtcatgaacctc
ttcaaggactgcaacttcgacagctgctgcgtgtgcgtctgcaacatgaacatccgcggc
tccgacgtgggtgtctatctcaaggacaacggcgaggaccagtacccgtgcacctgcggc
ttcagcgccgtggccaaccgccgcttcggccagtcggcggggctcttcctggaggacgag
ctggacgtggtggggcgtggctcggacgccggccgcgacacggagcgccgcttcgaggag
ctgaggggcagtctgaaggagaagccgccagatgagctgattctgctgctgcaggaccag
tgcaccaacccgctggcgcccatggcgggcgtggagtggcccaagccgagcgccgtcgca
gtcgccgcccccagctccttcctcagagtggaagagagggactgctacaacgactgctac
atggcgctggagcacggccggcagttcatggacaacatgtcgggaggcaaagtggacgaa
acgctggtgaaaagcaccagccttcatcagtggccaaaatgcaaatcagcagacatgagt
aagctgtactctcaggacgtcttgcgggtgctgctgtccctgcagcccgcgcttcaggac
accatccagaagaagggcgtgcgctcgtggggcgttcagggaccgctcacctggcagcag
ttccacaaaatggcagggagaggctcgtacggtacagacgagtctcccgagcctctgccc
atcccgacctttctggtcggttacgagtacgattttgtggtgctgtctcctttcgggttg
ccctactgggagaagctgctgctggatcctttcggctcccagagggacgtgggatatgtg
gtcatctgcccagaaaaccagacgttgctccgtggagccaagaccttcttcaaagacctg
agcgtcatgtacgaggcatgccagctgggacaacacaaacccatctgcaagagccaccca
gagggggtcctgaccgtcggctccccagaaggaaggagcatgacggagcaacccctcagt
gactggttcctcaagatggctgccagggaatcaaataatgaagcctttcataagctcaaa
ctctttgcgcaagtgtgtcgctatgatttagctccagacttgtctgagctgccgttggac
agctccctcttgtcccagcgtaatcccaccaaccccgccccgcagacctccacctcttcc
agcgcctcctcaggactccagagcaccaacactaccagcaccaactcttcccagcctgca
caggtcaacagcacccctcccccctcctcgtcgtcgtcttcatcatcgggctctcaaact
aacggagcgatggcctcgggcaagccgggttcctacatgccgtttgggacgggcggcctg
cagggcagcactactcagaacggaccgcagacaaactcgcaaagcgctggcggtctcggt
gacggcgcatccagccagcctcaggtctccgcggagacgcaggagagcacaatggagagg
gacaaagtgggcaagccgacagacggagagtcccacgccgtctcgtacccgcctgccatc
gtggtctacatcgtcgaccccttcagctacgagaacgcggacaaagaggtccactccagc
acttacactgtgggcctgctgcgctgcttcatggagatgctccccttcctgccggctcac
atcagaaacgccgtctccgtgcagattgttccctgccagtacctgctgcagccggtgcac
agcggcgaccgccacatctacagccagcacctcaagtcgttggccttctccgtgtacacc
cagtgtcgccggccgctgccgaactccaccaacttcaaggccttgacgggcttcgggccc
ggcctcgctcttgacatggccctcaagaacccggagcgaccggagtgtctccgtctgtac
acgccgtccttcattttggccccggtgaaagacaagcagactgaactcggggagacgttt
ggtgaggcgtcgcagaagtacaacgtgctttttgtgggctactgcctgtcccacgaccag
cgctggctgctggcgtcctgcaccgaccagcacggcgaactgctggagtcctgcatcatc
agtattgatgttcccaacagggctcgcaggaaaaagagctctgccagacgagtgggcctg
cagaagctgtgggagtggtgtgtcggcctggtccaggtgacatcactaccgtggagggtg
gtgattggacggcttggcaggatgggccacggcgagctgagagactggagcattctgctg
agtcggacaaacctgcagtctctcagcaagcgtctgaaggagacgtgtaggatgtgcggc
atctccgctgccgacacgcccagcatcctgagcgcctgtctggtcgccatggagcctcag
gggtcctttgtgatcatgccagactccgtgtcgaccggctcggtgttcggtcgcagcacc
accctcaacatgcagacgtcccagctgagcacgccgcaggacacgtcctgcacgcacatc
ctggtgttccccacgtcggccatggtgcaggtcaacaccaacaccacggagcccatcgac
atcagcttcaaccacatcaaccccgacggatccgaggggatgggaatctttgacctgttt
ggcagcgacatggatccagagctcatcaacatcctgcccaactccccgacgacctcgccc
ggccactctccgggacaccactaccaccacggagaagcgggcaagggccagggtgcggat
cggatggagtcccacgaggaggctctcagcatcctgcagcagcccatggctctgggttac
ttcatctccacggcgaaggcggggccgctgcccgactggttctggtccacctgtcccgaa
gcccagaatcagtgtccactcttcctcaaggcatctctgcacctgcacgtgtctgctgtc
caatcagacgagttcctgcacagtaaacactcccaccctctggactctaaccacacctcc
gacgtgctcagatttgtcctggagcagtacaacgccctctcctggctgacgtgcaacccc
gccacccaggaccgacgctcgtgtctgcccgttcacttcgtggtgctcacacagatctac
aacttcatcatgaacatgctctga
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