Xiphophorus maculatus (southern platyfish): 102226327
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Entry
102226327 CDS
T02923
Symbol
tp53bp1
Name
(RefSeq) TP53-binding protein 1 isoform X1
KO
K20915
tumor suppressor p53-binding protein 1
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
102226327 (tp53bp1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
53-BP1_Tudor
BRCT_3
BRCT_2
Tudor_5
RTT107_BRCT_5
Tudor_3
BRCT
DUF4537
Tudor_2
BAHCC1-like_Tudor
Motif
Other DBs
NCBI-GeneID:
102226327
NCBI-ProteinID:
XP_023187570
Ensembl:
ENSXMAG00000018260
LinkDB
All DBs
Position
4:2582660..2605785
Genome browser
AA seq
1569 aa
AA seq
DB search
MDPGGSELDSSLPQPENPCLIVEDSQPDSVGLEDDPESSYRALLARRLSSLQPAARSPVL
ELISSPPGSRCSQTDSQSESNNQAEPEVMAAANPNSLLQEESQVINVCPHPSKKKFVPED
SEMDPGADSTTNCVQSDGGSSQFGFLELSQSQDLEAGGDLSHHSEKQQRFAPKTLPHQDN
KAVRSEVSSSSSSESICQTGRQLTVQVLLHSQNLQESEERDQQDCDVLSSQEDLFDADKS
GGGVDSTVSEPEQPARPTSTPAHSLQLLHLSGQGTLVPESLSQSSVDYVAPTPDNFPHTP
LIIPSSPTEAENERDEDMDTSLPPEERAAATDEPMEMDAASRPHSPTSAPVSQNASGSER
ALPVPSQPEFSHDVFVPTQSQEASRKSPSLPSETQSSLRESFPSALQLSVNADSGDPVLV
EDDSQDTQIEELEEPPGVDAAALEESQQPGRTEPDLPHESDRQQQETETNVNESSNTNHS
DAAANSCVQETPCSTTEQNHSTDKNKMDDCEEEEVMKEENAGGASAMALVLSESQLMSPE
PMEEEEIQDSVVVATNGEKDRASQPESGISEANGAKRVITANGHRQQSQEERAEDALGGR
EMEGVKDKSLSDSSGDISFHFTLPKEGELIGPAVGSTPPPVSQLKQTLRHSTPIEIAPFS
EKPCGGGDDAAADGEDGKLSLRMKLVTPVEEGGSERFSLQKPVLSEEEEESVATVTTVST
AVTSPSVFTRVRQAHRQQGAEQDAHPGNNAVLRGKLFASPQRNSQVSPLGFNSLPNSQSE
PSQPDASSAPQNSLKDAGVPAEPTRKRREPSEAPDLRPLTSVEVGQKEASQKTPDGANSA
TPSSKARQRIASQQTGVDGSGPRSPGGRGEPETPSFRRTAAPAHRRHVRTIQEVRTTVTR
IITDVYYEDGREVDRRVTEENEEPVVDCQVLDSDISPCRTGSSSMTSGDLGDISSLSSKA
SSLHHSSGGTSGSTGLSRPDFVMPPSRGFRSVSLRRGGGHPQRGHRGQRAGSVVTVGRGG
SSFVPLTPRGRARRGRPPSRSSPSRGGGAGPLQRLGALAQTHSSSEDEPFACMLPPRLPA
SPSDADPPGRSDSLRSSPDASLSAGRGFVGLRVVAKWSSNGYFYSGRIVKDAGDSRFRLR
FDDGYECEVAGKDILLCDPIPLETEVTALLEDEYFSIGVVKGHKTEGQDLFYSVEKDGQR
QWHNRTAVILSLDQGNKLREQHSLGPYEPTTPLTKASDISLDNLVEGKRRRRGTPGGANT
PSRSSSGGARTPGPSGKRKLVPSEENKTPSKRGRRGGGARAGQRLSVCNTSGSGSDLPGR
PSDVVETHGPLPQNSSLFMGFAFMLTASSEVDRMTNKVTSDDEEDYVQTGPYNKPYTESQ
LQAGGGFILPDFNEEQCKAAYQSLLIADQHCRTRKYLLCLASGVPCVSHIWVRDCCKENK
LLNYRNYLLPAGVGPDDAIVEWHPRCSPFKALRVLLVSKKPNELWAQLVTMGGASSVRQH
QTDGDASEIPAGKYDVVVADHTCPPAVERSVTSQEVPIVSPEWLVQSVICGERLGFNSRP
QCSSSSSSS
NT seq
4710 nt
NT seq
+upstream
nt +downstream
nt
atggatcccggtggaagcgaactggactccagcctgcctcagccggagaacccgtgcctg
atagtggaagattcccagccggacagcgtcggcctggaggacgacccggagagcagctac
cgagcgctgctagcccgccgcctgtccagcctgcaaccggccgcccgcagcccggttctg
gaactgatatcatcaccaccaggaagtagatgctcccaaactgacagccaatcagagagt
aacaaccaggccgaaccagaggtcatggctgcagccaaccccaactcactgctgcaggag
gagagtcaagttatcaacgtctgtccgcatcccagcaagaaaaagtttgtacctgaggat
tctgaaatggatcctggagccgattctacgactaactgtgttcagtctgacggtggatcg
tctcagtttgggtttctggagctctcacagagtcaggacctagaagctggcggggatctc
agccatcactctgaaaagcagcagcgttttgcccccaaaactttgccgcatcaagataac
aaagcagtgaggtcggaggttagctccagcagctcctcagagtccatttgccagacgggt
cgccagctgaccgtccaggttctgctgcactcccagaacctgcaggagtccgaggagcgg
gaccagcaggactgtgacgtcctgtcctcacaggaagatctgttcgacgccgacaagtcg
ggcggcggtgtggacagcacggtgtcggaaccggagcagccggctcggcccacctcgacg
ccggcccacagcctgcagctgctgcatctgtccggacagggaacgctggtcccggagagt
ctgtcccaaagctccgttgactacgtcgccccaacgccagacaacttcccccacactcct
ttaatcattccaagctcgccgaccgaagcggaaaacgaacgcgacgaggacatggacacc
tcgcttccgccggaggagcgagcggcggcgacggacgagccgatggaaatggacgccgcc
tcgaggccacactcacctacctctgctccggtctcccagaatgcctctggttcagagcga
gcgctccctgtgccgtcacagccagagttctctcatgatgtttttgttccaacacagagc
caagaagctagcaggaagtctccatcattgccttctgagacccagtcttcgctccgggag
tcgtttccctcggcgctgcagctttctgtgaacgccgatagcggcgacccagttctggtg
gaggacgacagtcaggacacgcagatagaggagctggaagagccgccgggcgtcgacgcc
gcggctctggaggagtcacagcaacccggccggactgagccggacctgccgcatgagtcc
gacaggcagcaacaggaaacagagacaaatgtgaacgaaagtagcaacactaaccactct
gatgcggcggcgaacagctgcgtgcaggagacaccgtgcagcaccacggaacagaaccat
tcgacggacaaaaacaagatggacgactgtgaggaagaggaggtcatgaaggaggagaac
gctggtggcgcctcagcgatggcgctggtcctctccgagagtcagctgatgtccccagag
ccaatggaggaggaggagatccaggacagcgtcgtcgtggcaaccaacggagagaaagac
agggcctcacagccggagtccggcatttcggaggccaacggagccaaacgggtcatcacg
gctaacggccaccggcagcagagccaggaagagagagcggaggacgccctgggcgggcga
gaaatggagggcgtcaaagacaagagcctgagtgacagctctggagacatttctttccac
ttcactctccctaaagagggcgagctgattggtccggccgtggggtcgacgccgccgccg
gtcagccagctgaagcagacgctcagacacagcacgcccatcgagattgctcccttttcg
gagaagccgtgcggtgggggcgacgacgcggcggctgacggggaagacgggaagctgagc
ctgaggatgaagctggtgacgccggtggaggagggcggctccgaacgcttcagcctgcag
aagccggtgctgtcggaggaggaggaagagtcggttgccacggttacgacggtttccacg
gctgtaaccagcccgtcggtgttcactcgggttcggcaggctcaccggcagcagggggcg
gagcaggacgctcaccctggaaacaacgccgtcctcagggggaaactgttcgcctcgcca
cagaggaactcccaggtttctccgctgggattcaacagcctcccgaacagccaatcagag
ccgtcgcagccagatgcgtcgtcggcgccgcagaacagccttaaagatgccggcgttcct
gcggagccgaccaggaagaggcgagagccgtcagaggctccggacctccgtcctctgacc
agcgtggaggtggggcagaaggaggcgtcccagaagacgcctgacggcgccaactctgcc
actccgtccagcaaggcccggcagcggatcgcctcccagcagaccggtgtggatgggtcg
ggccctcgctctcctggcggccggggcgagccggagacgccgtcgttcaggagaaccgcg
gcgccggcccaccgtcggcacgtccgcaccatccaggaggtccggaccaccgtgacgcgg
atcatcacagacgtttactacgaggacggcagggaggtggaccgcagggtcacagaggag
aacgaggagcctgtggtggactgtcaggttctggacagcgacatttctccgtgccgcacc
ggcagcagctccatgacctctggtgaccttggcgacatcagctctctgtcctccaaggcc
tccagcctgcaccacagctccggcgggacgagcggcagcaccggcctcagcagacccgac
ttcgtcatgccgcccagcagggggttccgatccgtcagcctcaggaggggaggtgggcat
ccacagaggggtcacaggggtcaaagggcggggtcggtggtcactgtgggcagaggcggc
agcagcttcgtcccgctgacccccagaggaagggcccgtaggggccggcccccgtcccgc
tcctccccgtccaggggcggcggcgccggcccgctgcagaggctcggcgctctcgcccag
actcactcctcctctgaggacgagccgttcgcctgcatgctgccgccgcggctccccgcc
agcccgtcggacgccgacccccccggccgctccgactccctgcgctcgtcgccggatgcg
tcgctgtcggccggcagaggcttcgtcggtctgcgcgtcgtcgccaagtggtcgtccaac
ggctacttctactctggtcggattgtgaaggacgccggggacagccgcttccggctccgc
ttcgacgatggctatgagtgcgaagtggcggggaaggacatcctgctgtgcgaccccatc
ccgctggagacggaggtcacggcgctgctggaggacgagtacttcagcatcggggtcgtg
aagggccacaaaacggaaggccaggatctgttctacagcgtggagaaggacggccagagg
cagtggcacaaccggacggcggtcatcctgtccctggatcagggcaacaagctgagggag
cagcacagcctggggccctacgagcccaccaccccgctcaccaaagcctccgacatcagc
ctggataacctggtggaggggaagaggcggcgcagaggaaccccagggggcgccaacacg
ccgagccgcagctcctccggcggcgcccggacccccggcccgtccggcaagaggaagctg
gttccgtccgaggagaacaagacgccgtctaagagggggcgaagagggggaggagccaga
gctggccagcggctcagcgtgtgtaacacgtccggcagcggatcggacctgccgggtcgg
cccagcgacgtcgtggagacccacggcccgctgccccagaactcgtctctgttcatgggc
ttcgccttcatgctgacggcgtcgtcagaggtcgaccggatgaccaacaaggtcaccagt
gacgacgaggaggattacgtccagacgggtccgtacaacaaaccgtacacagagtcccag
ctgcaggccggcggcggcttcatcctgcccgacttcaacgaggagcagtgcaaggcggcc
tatcagagcctgctcatcgccgaccagcactgccgtaccaggaagtacctgctgtgtttg
gccagcggcgttccctgcgtctcccacatctgggtgcgtgactgctgcaaagagaacaag
ctgctgaactacaggaactacctgctgccggccggcgtcggccccgacgacgccatcgtg
gagtggcatccgcgctgcagcccattcaaagcactccgggtcctcctggtgtccaagaag
ccgaacgagttgtgggcccagctggtgacgatgggcggagcttcatccgtacggcagcac
cagaccgacggcgatgcatcagagattcctgccgggaagtacgacgtggtggtggcggac
cacacctgtccgccggcggtggagcggagtgtgacatcacaggaagtgccgattgtgtct
ccggagtggctggtccagagcgtaatctgtggggagcgtctgggttttaacagccggcct
cagtgctcttcctcctcctcctcctcataa
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integrated database retrieval system
