Xiphophorus maculatus (southern platyfish): 102226935
Help
Entry
102226935 CDS
T02923
Name
(RefSeq) protein transport protein Sec24B isoform X1
KO
K14007
protein transport protein SEC24
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
102226935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xma04131
]
102226935
Membrane trafficking [BR:
xma04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
102226935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Ribosomal_60s
Motif
Other DBs
NCBI-GeneID:
102226935
NCBI-ProteinID:
XP_023184613
Ensembl:
ENSXMAG00000018296
LinkDB
All DBs
Position
23:complement(5037110..5062135)
Genome browser
AA seq
1210 aa
AA seq
DB search
MSASGFTNLDSSAGFNQNPTPNGGAAPPCQNGPLPTHPSMYPPAGYYGVPPPQQSYLSIP
SHATSAPSKASIASSAHSQNYYQNNHQQQQQQTQLPQHQVALSPYSAPPPSQPYATLPSL
APPPSNAQFNQQAFQQQQALYTTSGPYYGQQSYRASPAQPRHHHHHHQQQQHHPSLVSSP
AGIPVYPNVSYPSGPASSHYVPHTSSNTSTPGVMSTQMGAPLHQFSALPPASTAVQPGYG
TGHQTAATVNGKGSTAAVQNNIHQHYDQNNQAPHNYNSYSGVTQSSGGADGDRPPSGTPS
TSVHSSPSRHQGLQYGYVANSGASSASATTSGAAAAPSSSSTDDDEEEEDEDEEAGGDTS
SSSTGSASPVPNNYDSLEGGSYPDSMPPSNNMTNQAPPFGSFGYHGMQTAYQHGPASRPD
ASPSHSVYSQPGYQQYSQPFPNLSQLSAALGGLSGVPELEMEALRPVNLLQERNLLPSRP
LEAPEPNLSPDLKKVNCSPQTFRCTLTSIPQTQALLNKARLPLGLLLHPFRDLQQLPVIT
SNTIVRCRSCRTYINPFVTFLDQRRWKCNLCYRVNDVPDEFMYNPVTRSYGEPHKRPEVQ
NSTVEFIASSDYMLRPPQPAVYLFVLDVSHNALEAGYLKYFCESLLENLDKLPGDARTKV
GFLTFDNTVHFYNLQEGLSQPQMLVVSDIDDVFIPSHDSLMVNLKESKELVKELLTSLPA
MFSQSRETHSALGPALQAAFKLMSPTGGRVTLFQTQLPTLGAGKLQSREDPNQRSSTKGA
QHLGPATDFYKKLALDCSGQQIGVDLFLLSSQYADLSSLACVSKYSAGSVFYYPSFHCIH
NPAQLEKFQRDLDRYLTRKVGFEAVMRIRCTKGLSIHTFHGNFFVRSTDLLSLANVNPDS
AFAVQMSIEDSLADSSLACFQAALLYTSSKGKRRIRVHTLCLPVVSQLSDVYAGADVQAI
TCLLANMAIDRSISSSLSDARDALVNAVVDFVSAYKSSVSNLQQSGVVVPAAMRLFPLYI
LALLKQKALRTGTSTRLDERIFAMCEFKTQPLPQLMRMLHPDLYRVDNMSDQGALHLNDT
VVPQPHLLHLSAERLSRDGAFLMDCGNVFYLWISKCCNETFICDVLGCSSYASIPPNMSH
IPELQTPLSERVRAFLDWLQDNRAFSSPIHIVKDDASAKATLFQHLVEDRSESASSYHEF
LQHIQQQMSK
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgtcggggttcacaaacctcgacagttctgcgggattcaaccagaacccaacg
ccgaacggtggagctgcgcccccctgtcagaacggtccactaccaacccacccatccatg
taccctcctgcaggttactatggcgtcccgcctccacagcagagctacctctccatcccc
agccatgccacttccgctcccagcaaagcatcaatcgcaagcagtgcccacagtcagaac
tactaccaaaacaaccaccaacagcagcagcagcaaacacaactccctcagcatcaagta
gcactgtctccatactctgctccgcctccctctcagccatatgccaccctcccatcttta
gcacctccaccttcaaatgcccagttcaaccaacaggctttccagcagcagcaagcactc
tacaccacttccgggccctactatggtcaacaatcatacagagcgtctccagcacagccc
cgccatcatcatcatcaccatcagcagcagcagcatcatcctagtttggtttcgtcgcca
gctggcattcctgtctacccaaatgtttcatacccatctggcccagcgagcagccactat
gtcccccacacttcctccaacacctccacacctggagtcatgtccacccagatgggcgcg
cccttgcatcagttcagcgccctgcctccagcctcgacggctgtgcagccggggtacggc
acggggcatcaaacagcagcgacagtgaatggcaaaggaagcacagctgcagtccaaaac
aacatccaccaacactatgaccaaaacaatcaggcccctcacaactacaactcctacagt
ggggtgacacaaagcagcggaggtgcggatggagaccgcccgccctcaggaaccccctcc
acttcagtccattcctccccaagccgccaccaaggcctgcagtacggatatgttgctaat
agtggagctagctcagcctctgccaccacctcaggcgcagctgcagccccctcgtcatcc
agcactgatgatgatgaggaggaggaggatgaggatgaggaagcaggcggcgacacttcc
tcctccagtaccggcagcgcctctccagttcccaacaactatgattccctcgaaggcggc
agctatccagattccatgccgccctccaacaacatgaccaatcaggctccgccctttggt
agctttggttaccatggcatgcagacggcctatcagcacggaccggcttcccgccctgat
gcttccccgtcccacagcgtgtacagtcagccgggttaccagcagtactcccagcctttc
cccaacctgtcccagctctctgcagctctgggtgggttgagcggcgtcccagagctggag
atggaggccctgaggccagtcaacctgctgcaggagaggaacctgctcccttccaggccc
ttggaggctcctgagccgaacctcagccccgatctgaagaaggtcaactgcagcccacaa
acattcaggtgcaccttgacgagcatccctcaaacccaggcgctactcaacaaggcccgc
ctccctctgggcctcctccttcaccccttcagagatttacagcaactaccagtgatcaca
tccaacacaatagtgcggtgtcgctcgtgtcggacgtacatcaacccgttcgtcaccttc
ctggaccagcgcaggtggaagtgtaacctctgttatcgagtcaacgatgttccagatgag
tttatgtacaacccggtaacgagatcatatggagagcctcacaagagaccagaggtccaa
aactcaacggtggagttcatcgcttcctcagactatatgctgcgacccccacagccggca
gtctacctgtttgtgctcgacgtgtctcacaatgccttggaggcaggatacctgaagtac
ttctgtgaatcacttctggagaacctggacaagttgcccggagacgcgcgcaccaaggtg
ggtttccttacctttgacaacaccgtccatttttacaacctccaggagggactgtctcag
ccacagatgctggtggtgtcggacatcgacgatgtttttataccgtcacatgacagtctg
atggtgaatctaaaggagagtaaagagcttgtgaaggagctgttgacgtcgctgccggcc
atgttcagccagagcagagagacgcacagcgctctcggtcccgccttacaggccgccttc
aagctcatgtcgccgaccggcggtcgcgtcacgctgttccagactcaacttccgactctg
ggagcagggaagctgcagtcaagagaggatccgaaccagcgttccagcaccaagggagca
cagcacctgggtcctgccacagatttctataagaagcttgcgctggactgctcagggcag
cagattggagtggatctgttcctgctcagctcacagtacgccgacctttcatcactggca
tgtgtctccaagtactcggcgggcagcgtcttttactacccctcctttcattgcatccac
aacccggcgcagctggagaagtttcaaagggacctcgatcgctacctcaccaggaaggtc
ggattcgaggccgtcatgagaatacgatgcactaaaggtttatccatccacacgttccac
ggtaacttctttgtgcgttccaccgacctgctgtccctggctaatgtgaatccagactct
gccttcgctgtccagatgtccatcgaagactctcttgctgattcgtctctggcctgtttt
caggctgctctgctctacacgtccagtaaagggaaaaggcggatcagagtccacactctg
tgtctaccagtggtcagtcagctgagcgatgtttacgccggagctgatgttcaggctatc
acatgtctgctagccaacatggccatcgatcgatcgatatcttccagcctgtcagatgct
cgtgatgctctggtgaacgccgttgtggactttgtgagcgcctacaaaagcagcgtgtcg
aacctgcagcagtctggggtcgtcgtccctgcagccatgcgactttttcccctctacatc
ctggctcttcttaaacagaaagcgctgcggacaggaacgagcacgcgactcgatgagcgc
atcttcgccatgtgtgagttcaagacgcagccgctgccacagctgatgcggatgcttcat
cctgacctgtaccgggtggacaacatgtctgaccaaggggcgctccatctgaatgatact
gtagttcctcagcctcacctgctgcatctttctgctgagaggctcagcagagatggagcg
ttcctcatggactgtggcaacgtgttttatctctggatcagcaaatgctgcaacgaaacg
tttatctgtgatgttctgggctgctccagctacgcttcaattccccccaacatgagtcac
attccagagctgcagactcctctgtcggaaagagtccgagcgtttctcgactggctgcag
gacaacagagcgttcagctctccgatccacatcgtcaaagacgacgcgtcagcgaaggcc
accttgttccagcacctggtggaggaccggtctgagtcggcgtcatcctaccacgagttt
ctgcagcacattcagcagcaaatgtccaagtag
DBGET
integrated database retrieval system
