Xiphophorus maculatus (southern platyfish): 102228851
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Entry
102228851 CDS
T02923
Symbol
poll
Name
(RefSeq) DNA polymerase lambda
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03410
Base excision repair
xma03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
102228851 (poll)
03450 Non-homologous end-joining
102228851 (poll)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xma03400
]
102228851 (poll)
Enzymes [BR:
xma01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
102228851 (poll)
DNA repair and recombination proteins [BR:
xma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
102228851 (poll)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
102228851 (poll)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
BRCT
BRCT_2
LIG3_BRCT
PTCB-BRCT
HHH_5
NTP_transf_2
RCC_reductase
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
102228851
NCBI-ProteinID:
XP_014328527
Ensembl:
ENSXMAG00000000075
UniProt:
M3ZCZ7
LinkDB
All DBs
Position
5:complement(21014773..21020758)
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AA seq
573 aa
AA seq
DB search
MEPRHGIMKAFPKVKRAKVLQGKDVPPLKKKAEEHDVTGDFFNGVTVYLLPAGIGNARCQ
IFHRQIQQNGGQIQSSLSPSVTHVVVDDTMDSDRALRLMKVDRLPSDVHLVKCTWLSLCI
SEKKVLDEENYSLLLPKRDSESKHESTEDKQSENTEHPAETTTEPEIHLTKEEETVDITI
PKAKEEANREEDGVSQSDLEALITGRHPKEETPDSSTNSGPDAAASAAEAQKPVSGKWVC
AQSSQCKSNNFNKCITDKLEVLAKAYTHQGDKWRALGYSKAINALKSFHKPITSYQEACQ
IPGIGKRMADKIEEIMESGHLRKLDHIGEAVPVLELFTNIWGAGAKTAQLWYQQGFRTLD
DIRTKAHLTSTQKIGLKHYDDLLDRMPREEAAAIEKVVSDAAHAVDAALVAMACGSYRRG
KATCGDVDVLISHPDGKSHKGVFSKVLQILHDSGFLTDDLVSHEDNGEQKKYMGVCRLPG
PGWRHRRLDVIVVPYEEFACSLMYFTGSAHFNRSMRALAKTKNMSLSEHSLNKDVVRQGS
LKTHGGNPLPTATEKDVFRLLGIPYRPPQERDW
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggagcctcgacacgggatcatgaaagccttccccaaagttaaacgggctaaagtgttg
caggggaaggacgtgcctcccctcaagaagaaagcagaggaacatgatgtcacaggagac
ttcttcaacggcgtcacagtgtaccttctacctgctggaatcggaaacgccagatgccag
atcttccacaggcaaatccagcagaatggagggcaaatccagagttcgttgtccccctct
gtcactcatgttgttgttgatgacaccatggacagtgacagggctctgcgcctgatgaag
gtggatcgtctgccatctgacgttcatctggtgaaatgcacgtggttaagcttgtgtatt
agtgagaagaaagtcctggatgaggaaaactacagccttctgttacccaaaagagactcg
gaatcaaagcatgaaagtacagaagacaagcaatcagaaaatactgaacatcctgctgaa
acaaccacagagccagaaattcatcttaccaaggaagaggagactgtagacataacaatc
ccaaaggccaaagaagaagctaacagagaagaagatggcgtctctcagagcgacctggaa
gccctcatcaccggacggcaccctaaagaggagactcccgactccagcacaaactccggt
ccagatgcagccgcctctgctgctgaagctcagaaacccgtttcaggaaagtgggtctgt
gctcagtcttctcagtgcaaaagtaacaacttcaacaaatgcatcacagacaagctggaa
gtgttggccaaggcctacacacaccaaggagacaagtggagagcactgggctactccaag
gctatcaacgcactgaagagcttccacaagcccatcacatcatatcaggaagcttgtcag
atccctggaataggaaaacgcatggcggataaaatagaagaaattatggagagtggtcac
ctgaggaagctcgatcacattggagaggccgtgcctgtcttggagcttttcaccaacatt
tggggagcaggagcgaaaacggcccaactttggtaccaacagggctttcgcaccctggac
gacatccgaaccaaagcccacctaaccagcactcagaaaataggactgaagcactacgat
gaccttctagaccgaatgcctagagaagaggcggcagccatagagaaagtggtgagcgat
gctgcacatgccgtcgatgccgccctcgtggcaatggcgtgcggctcttaccgtcgcggg
aaagcaacgtgcggagatgtggacgttcttatctctcaccctgacggcaagtcccacaag
ggagttttcagtaaagtcttacagattctccatgacagtgggtttctaacagatgacctg
gtgagccacgaagacaacggagaacagaagaaatacatgggcgtttgccgtttgccaggg
cccggttggcgccaccgcaggctggacgtcatcgtcgtgccttacgaggagtttgcctgc
tcgcttatgtatttcaccggctcggcccacttcaaccgctccatgagagcactggcaaag
acgaaaaatatgagcttatcggagcactctcttaacaaagacgtggtgcgtcaaggcagc
ttgaagacgcacggtggcaacccactacccacggcaacggagaaagatgtttttagactt
ctagggataccgtacagaccaccgcaagaaagggactggtga
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integrated database retrieval system
