Xiphophorus maculatus (southern platyfish): 102229426
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Entry
102229426 CDS
T02923
Symbol
nelfb
Name
(RefSeq) negative elongation factor B
KO
K15180
negative elongation factor B
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
102229426 (nelfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xma03021
]
102229426 (nelfb)
Transcription machinery [BR:
xma03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
NELF complex
102229426 (nelfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COBRA1
Motif
Other DBs
NCBI-GeneID:
102229426
NCBI-ProteinID:
XP_005807445
Ensembl:
ENSXMAG00000003997
UniProt:
M3ZP72
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All DBs
Position
11:complement(937950..949240)
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AA seq
585 aa
AA seq
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MFAGLPELGIANGEDLKETLTNCTEPLKAIDQFQMENGILLPTLQSALPFLDLHGTPRLE
FHQSVFDELREKLMEQVAVIAEGKDEDRYGKLEELLEKSFPLVKMPSIQPVVMQVLKHLP
KVPEKKLKMVMADKELYKVCAVEVKRQIWQDNQALFGDEVSPLLKQYIVEKEAALFSSDL
SILHNFFSPTPKTRRQGEVVLKLTQMIGKNVKLYDMVLQFLRTLFLRTRNVHYCTLRAEL
LMSLHDLDISEICSVDPCHKFTWCLDACIREKFVDSKRARELQGFLDGVKKGQEQVLGDL
SMILCDPFACNTLVLSLIRNVQELLSQDALPRDSPDLLLLLRMLSLGQGAWDMIDSQVFK
EPRLDLEVVTRFLPAMMSVVVDDHTFIVEQKLPSEEKSSLTYPTNLPDAFIRYLQDNRVA
CEMGLYYVLHIAKLRNRNALQRLLPALVETYNDMAFGDIFLHLLTAHLTLLSDEFGSEEF
CSVVFDGFLLTSFSSKENVHRHILRMLLHLHHKVLPSYLETLMQTLEPPKQCSDPLKELH
SQLTEKLEAHKKSPTPPDEPTSLDLGLHPVTVPTTSSSSAPTTPV
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgttcgcgggcctgccggagctcgggatagccaacggcgaggacttaaaggaaactctg
accaactgcacagagcctctcaaagccattgatcagttccagatggagaatggcatcctg
ctgccgacgctgcagtccgctctgcccttcctcgaccttcacgggaccccgcggctggag
ttccaccagtctgtcttcgacgagcttcgagagaagctgatggagcaagtcgccgtcatt
gcagagggcaaggatgaagaccgatatgggaagcttgaagagctgctggagaagagcttt
cctctggtgaaaatgccttccatacagccagtggtgatgcaggtgctgaagcatctacct
aaagtaccagagaagaagctgaagatggtcatggctgacaaagagctgtacaaggtgtgt
gctgtggaggtgaagaggcagatctggcaggacaaccaggctctgtttggggacgaggtg
tccccccttctgaagcagtacatcgtggagaaggaagcagccctgttcagcagtgacctc
tccatccttcacaacttcttcagtcccacgcctaaaacccggcgccagggcgaggtggtg
ctaaagctgacccagatgattgggaagaacgtgaagctgtacgacatggtgctgcagttc
ctgcggacgctcttcctgcggacgcggaacgtccactactgcacgctgagagccgagctg
ttgatgtctctgcacgacctggacatcagtgagatctgctccgtggacccctgccacaag
ttcacctggtgtctggacgcctgcatccgggagaagtttgtggacagcaaacgagccaga
gagctgcagggtttcctggacggtgtgaagaagggccaggagcaggttctcggagatctg
tccatgatcctgtgtgacccgtttgcctgcaacaccctggtcctgagtttaatcaggaac
gtacaggagctgctgagtcaggacgctttacccagggacagcccagacctgctgctgctc
ctcaggatgctgtcactgggtcagggagcgtgggacatgatcgacagccaggtctttaag
gagcctcgcttggatttagaggtggtgacccgcttcctgcctgctatgatgtctgtggtt
gttgatgatcacaccttcatagtagagcagaagcttcccagtgaggagaaaagctccctg
acgtaccccaccaacctgccagacgcattcatcagatacctgcaggacaacagagtggcc
tgtgaaatggggctctactatgttctacacatcgccaagctgaggaacaggaacgctctg
cagcggctgctgcctgctctggtggagacctacaatgacatggctttcggtgacatcttc
ctgcacctgctgactgctcacctcaccctgctctctgatgagtttggatcggaggagttc
tgctctgttgtcttcgacggattcctccttacttccttctccagtaaagaaaacgtccac
agacacattctgcgcatgttgctgcatctccaccacaaagtgctgccttcatatttggaa
acgctgatgcaaacactggagcccccaaaacagtgcagtgatccgctgaaggagctgcac
agtcagctgacagagaagctggaggcccacaagaagagtccgacgcccccagacgagcct
acgtctctggacctggggctgcatcctgtgacggtacccaccacgtcctcctcctccgct
ccaaccaccccggtctga
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