Xiphophorus maculatus (southern platyfish): 102230684
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Entry
102230684 CDS
T02923
Symbol
casc1
Name
(RefSeq) protein CASC1 isoform X1
KO
K17580
cancer susceptibility candidate protein 1
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xma01009
]
102230684 (casc1)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xma03037
]
102230684 (casc1)
Protein phosphatases and associated proteins [BR:
xma01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102230684 (casc1)
Cilium and associated proteins [BR:
xma03037
]
Motile cilia and associated proteins
Dynein arm
102230684 (casc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Casc1_N
Casc1_C
Motif
Other DBs
NCBI-GeneID:
102230684
NCBI-ProteinID:
XP_023191278
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All DBs
Position
6:complement(12491169..12499691)
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AA seq
708 aa
AA seq
DB search
MKKGRMTKAERLKKQQEEEEAARLQAEKEEQERLERQRKLEEIQRLEEKAEQNRDLELTE
LRLLLEENYSAIIKWKVDAAEKAEWERYMLCDGVPDAKDQRAVNTFVTLWKDYSDSNIGE
ELQLCNSAVKLIEDLDELVKEAKDPELVPKYHDALIEVQEILHAKHLFITEKLLKGASDN
IDPDTRNMQTVSKHTNVTLCLWANLFKNPSFTGFDFNEAGLSFKLPEELAVSDIAVRILH
THYDHLSILSRLRHAPQKPIVEEIPPPVQEPEETQDGDCTSELPSCPHSPTSEPSIKSIS
PPSSEESMITTQTEVLSGHSSSLVSTVCPTKDPSWPSLAQLNCLSSAGPEFEETENDSEV
VNLVQYTTLGGVFYYDLLQLPPQPIRRKGYTILQMVDGLKVFPYPTERPKNEECPDDPTE
APNNKPCSPVGVCIVLPEWVIFMEMPLVARWDAEDGRWRKDGITNVSYEEAEGKISFEME
SFQIFTLMHNTFANFPFQGWELRPLGQNSAVFTVKGALIEVSITIKNSQCMLRLAHSRGL
SHLVGQWMSAPALQKAMLKAGINIFVNENTHKYVSVCKKNPLIEQFAYDQMALFASACAF
KWSKWNATCGEENLVLQGSEHLKIGLVPEDSWSTYFMGSQRTRQLEITENSKDFSIDHAA
GSEFHSTLIHLLQDSMSPDGLALVRQSHYCFIDTVQTLLSATRPLVFS
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaggcaggatgactaaagcagagaggttaaagaagcagcaagaggaagaagag
gcagcccggctgcaagccgaaaaagaagaacaggagagactggaaagacagagaaagctg
gaggagatacaaaggctagaggaaaaggcagagcagaacagagacttggagcttaccgaa
ctgcgccttctgctggaggaaaactactctgcaataatcaaatggaaggttgatgctgca
gaaaaggcagagtgggagagatacatgctttgcgatggagtcccagacgcaaaggaccag
cgggcggtcaatacatttgtcaccttgtggaaggattactcagactccaacattggagag
gagcttcaactgtgcaactcagcagtaaagcttattgaagacttggatgagcttgtgaaa
gaggccaaagatccagagttggtcccaaagtaccacgatgctctcatagaggtccaggag
attctccatgctaagcaccttttcataactgagaagctcctaaagggagcaagcgacaac
attgaccctgacacaaggaacatgcagactgtgtccaaacatacaaatgtgacgctgtgt
ctctgggccaaccttttcaaaaacccaagctttacaggtttcgactttaacgaagctggc
ctgagctttaagcttcctgaggagctggctgtgagcgacattgccgtgcggatcctccac
acccactatgaccacctgtcaatactgtccaggctcaggcatgcacctcagaagccgata
gtggaggagattccgccgcctgtccaggagccagaggaaacccaggatggtgattgcacc
agtgaactgcccagttgcccccacagtccaaccagtgaaccgtccataaaaagcatcagc
ccgccatcttcagaggaaagcatgataactacacagacagaagtactcagtggtcacagt
tccagcctggtttcaactgtttgtccaaccaaggatccatcttggcccagcttggcccag
ctgaactgcttgagttccgctgggcctgaattcgaagagacagaaaatgactcagaggtt
gtaaatctggttcagtacacaaccctgggtggagttttctactatgatctgcttcaactc
ccacctcagcctatcaggaggaaagggtacacgatactgcagatggtggacgggctgaag
gtgttcccttacccaacagaaaggcccaagaatgaggaatgtcccgatgacccaacagaa
gcacccaacaataagccgtgctctcccgttggggtgtgcattgtgcttcctgagtgggtt
atcttcatggaaatgccacttgtggctcgctgggatgctgaagatggccgctggcgaaag
gatggcatcaccaacgtctcctacgaggaggcagaaggcaaaatctcctttgagatggaa
tcattccagatctttacactgatgcacaacaccttcgccaactttcctttccagggctgg
gagctgcggccgctgggccaaaactcagctgtttttactgtcaagggggctctcattgag
gtctccatcaccattaagaatagtcagtgtatgctgcggctggcgcacagtagaggcctc
tctcacctcgtggggcagtggatgagcgcaccagctctgcagaaagccatgctcaaggca
gggatcaacatctttgttaacgagaacacgcacaaatacgtcagcgtctgcaagaagaac
ccacttatagaacagtttgcttatgaccagatggccctctttgcatcagcttgtgctttt
aaatggagcaagtggaacgccacatgtggagaggagaatctggtccttcaggggtctgag
caccttaaaatcggccttgtacctgaagactcttggagtacttactttatgggttcacag
aggactaggcaactggagatcactgagaacagtaaagacttttccatagaccacgcagct
ggcagcgagttccactccacactcatccatcttctgcaggatagcatgagtcctgatggg
ttagctttggtcagacagtcccattactgcttcattgacactgtgcaaaccctgctttct
gctactagacccctggttttttcataa
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