Xiphophorus maculatus (southern platyfish): 102230937
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Entry
102230937 CDS
T02923
Symbol
fip1l1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102230937 (fip1l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xma03019
]
102230937 (fip1l1)
Messenger RNA biogenesis [BR:
xma03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
102230937 (fip1l1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
DUF5946
Motif
Other DBs
NCBI-GeneID:
102230937
NCBI-ProteinID:
XP_023195110
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Position
9:complement(23132950..23156158)
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AA seq
390 aa
AA seq
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MFFWDSEYMGPDEDDDPFQWTYDSHDKETEIYQSLHSSGQIPEDPEFNSEIRTEPVGCKK
EEDEDVVQNIHEVKEPKQDVEPVEEKPWRKSGADITDYFNYGFDEESWKAYRMKHAKLQA
FQAQHIANVMREQAKYEVEVMCASSNSGRPSRKSCRRRKAKTTRRGGKGRSRRSREKARP
CRTDAAKDTQSVMRISHKKDTVTNYDMPRSVNARTMFSFVPPPSSLFQFYQSESPTNTLS
SDNVGNIEEPSTSLYPCFVGNMSTDFAVVDSAKAWECYIKQQRSRDRAYGHDKNRRRCSD
RDKHRSSLSRHSEKKPAEHRDSADYEHKRRRIEGVTGKKKQKDEEEGSRKISQRSSSDSR
KDDREARKTRHNHAEGKDSGKARKATEKRK
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgttcttttgggattcagaatacatgggtcctgatgaagacgacgacccgtttcaatgg
acatatgacagccatgacaaggagacagaaatttaccagagtcttcatagctctgggcag
atacctgaggatcctgagttcaattctgaaataaggacagagccagttggctgtaaaaaa
gaggaggacgaggatgtggttcagaatatccatgaagtcaaagagccaaagcaggatgtg
gagcctgtagaggaaaagccatggaggaagtctggggctgatatcacggattactttaac
tacggtttcgatgaagaaagctggaaggcgtaccgtatgaagcatgctaagctccaagca
ttccaagcacaacatatcgctaatgtcatgagggagcaagctaaatatgaagtggaggtg
atgtgtgcttcttctaattcaggcagaccatctaggaaatcctgcagacgaagaaaagct
aagaccactaggcgtggaggcaaagggagaagcaggagaagcagagagaaagcacgccct
tgtcgcaccgatgcagccaaagatactcagtcagtaatgaggatttcccacaagaaggac
actgtcaccaattacgacatgccacgttcggtcaacgcccgcaccatgttctcatttgtg
cctccaccctcttcacttttccagttttaccaatctgagtcccccactaacacactgagc
agcgacaatgttgggaacatcgaggagccctcgacttccctgtatccatgttttgtcggg
aacatgtccacagactttgcggtggtggatagtgccaaagcctgggagtgctacataaag
cagcagcgcagcagagacagagcgtacggccatgacaaaaacagacggcgatgcagtgac
agagacaaacacaggtcttccttgtcacgccacagtgagaagaagccggcggagcacagg
gactctgcagattatgagcacaaacgtcgcaggattgaaggagtcaccggcaaaaagaag
cagaaagacgaagaggagggctcgcgaaaaatatcgcaaagaagtagcagcgacagtagg
aaggatgacagggaggccaggaagacaagacacaatcacgcagagggcaaagactctggg
aaggctcggaaagcgactgagaaaagaaaataa
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