Xiphophorus maculatus (southern platyfish): 102231797
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Entry
102231797 CDS
T02923
Name
(RefSeq) transcriptional repressor CTCF-like isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xma03000
]
102231797
03036 Chromosome and associated proteins [BR:
xma03036
]
102231797
Transcription factors [BR:
xma03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
102231797
Chromosome and associated proteins [BR:
xma03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
102231797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-H2C2_5
zf-C2H2_jaz
zf-met
zf-C2HE
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
102231797
NCBI-ProteinID:
XP_005810177
Ensembl:
ENSXMAG00000016342
LinkDB
All DBs
Position
2:complement(31301420..31314334)
Genome browser
AA seq
919 aa
AA seq
DB search
MRFNVAPLLANQGAASVPTPPPSGRTGALSAQLPFCGRSYSAKAGEELKLTAKKRVVYSE
LVKLFSAASLLPGGTTGRRNTQKQLLLDMDGSSAEAVGEVDAPPKDFPSIQAVHSQEALV
VDLLQQAAEAGGVVQGPAAVILEQGHVEGMVAAAQSQQALLEAGVGVSVQRGEVEMMVMD
SLDPTLMQMKTEVIDAAVRGSSATVGVVAGAAHQAAVATVDQTQIITLQVVNMEEQAALG
LGELQLVQVPVSAAAVDALQQGTFVDTTAMPKSGDPVICHTLPLPEGFQVVKVGANGEVE
TVEQEEGVEAHSEEDEDDAEVGQQLLEEGEEAAQPPNHHQNWAKDPDYQPPSGGIKKAKK
GKKSRLRYAEGDKDMDVSVYDFEEEQQEGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTF
QCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCTD
CDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSY
ASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVI
ARKSDLGVHLRKQHSFIETGKKCRYCDAVFHERYALIQHQKSHKNEKRFKCDLCDYCCRQ
ERHMVMHRRTHTGEKPFACSQCEKTFRQKQLLDMHFKRYHDPNFVPTAFVCPKCSKTFTR
RNTMARHSENCNGEVEEFENGAATPKKGRRGRKRKMRSRRDEDDSEDDIPEQDEGEEEGE
EEAALLQEEEDLEGMELDQAPAVIPVVAPDEPPVKRKRGRPPKNPKPQTPSRAGTASSVA
AMIQVEDELTGAVENIIVKKEGGDAATSVKQGADLAVEGGVGGGEGVEEVELTVNQETTA
ATAANGDLTPEMILSMMDR
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgcgttttaacgttgcgcccctcctggccaatcagggtgctgcatcagttccgacacca
ccccccagcggccgcacaggcgcactgagcgctcaactgccattttgtggcagaagctac
tctgccaaagcgggtgaggaattaaaactaactgcgaagaagcgtgtagtttattccgag
ctggttaaactttttagcgctgcctctctgcttccaggcgggaccaccgggaggagaaac
actcagaaacagttgttgctagacatggatggcagctcagcagaagctgtgggggaggtg
gacgccccccctaaagacttcccatccatccaggccgtccacagccaggaggccctggtg
gtggatctcctccagcaggcagcagaggccgggggcgtggtgcagggaccggcggctgtc
atactggagcaaggtcatgtggaaggaatggtagcagctgcccaatcccagcaggcgctg
ctggaagctggggtcggggtgagcgtgcaacgtggagaagtagaaatgatggtcatggat
tccctggatcccaccctgatgcagatgaagactgaggtgatcgatgctgcagttaggggg
tcatcagccacagttggcgtggttgcaggagcagctcatcaggctgccgtggcaacagtg
gaccagactcagatcatcaccctgcaggtggtcaacatggaggagcaggcagctctgggt
ctgggcgagctgcagctggttcaggtgccggtttctgccgccgccgttgacgctctgcag
caaggcacatttgtggataccacagcaatgccgaagtctggagaccccgtcatctgtcac
acacttccactgcctgagggctttcaggtggtcaaagttggtgctaatggggaggtggag
actgtggagcaagaagagggagtagaggcacattctgaagaggatgaggacgatgcagag
gtgggacagcagctgctggaggaaggagaggaggctgcccagcctccaaaccatcaccaa
aactgggctaaagacccagactatcagcctccatctggggggatcaaaaaggccaagaag
gggaagaagagccgcctgcgctacgctgaaggagacaaggacatggacgtcagcgtgtac
gactttgaagaggagcagcaggagggccttctgtctgaggtcaatgcagagaaagtagtc
ggcaacatgaagcctccaaagcccacaaagatcaagaagaaaggggtgaagaagactttc
cagtgcgagctgtgcagctacacatgtcctcgtcgctccaaccttgaccggcacatgaag
agccacaccgatgagagaccccacaaatgtcacctctgtggaagagccttcaggacggtg
acgctgctgagaaatcatctcaacacacatacagggactcgaccacacaagtgcacagac
tgcgacatggccttcgtcaccagtggagaactggtgcgtcatcgtcgctacaaacacaca
cacgagaagccgttcaaatgctccatgtgtgactacgccagtgtggaggtgagcaaactg
aagcggcacattcgctcccatactggggaacgtcccttccagtgcagtctgtgcagctac
gccagcagagacacatacaagctgaagagacacatgaggacacactcaggagaaaaacct
tatgagtgctacatctgccacgcccgattcacccagagcggaaccatgaagatgcacatc
ctgcagaaacacacagagaatgtggccaagttccactgtccacactgcgacactgtcatc
gcacgcaagagtgacctgggggttcatctgcggaagcagcactcgtttattgagaccggg
aagaagtgtcgctattgtgatgctgttttccatgagcgctacgctctaatccagcatcaa
aagtcccacaagaatgagaagaggttcaagtgtgacctgtgtgactactgctgccgtcag
gagcgccatatggtcatgcaccggcggacccacacaggagagaagccgttcgcgtgcagc
cagtgtgaaaagaccttcaggcagaagcagctgctggacatgcacttcaaacgctaccac
gaccccaactttgttcccacagcttttgtttgccccaagtgtagcaagacgttcacccgc
aggaataccatggctcgtcattctgagaactgtaacggggaggtggaggagtttgagaac
ggagctgccactccaaagaaaggcaggagaggaaggaagaggaagatgaggagcaggagg
gatgaggatgatagcgaagacgacatccccgaacaagacgagggtgaagaggagggtgag
gaagaagcagcactgctgcaggaggaggaagacctggagggcatggagctggatcaggct
cctgctgttatcccagttgtggccccagatgagcctccagtgaagaggaaacgaggccga
ccccccaagaaccccaaacctcaaacccccagcagagctgggactgcttcttctgtggct
gccatgattcaggtggaggacgagctgacgggtgcagtagagaacatcatagtgaagaag
gaggggggcgacgcagcaacttctgtgaagcagggagcggacctggcagtggaaggaggg
gtgggtggtggtgagggggtggaggaggtggagctgactgtgaaccaggaaacaacagca
gctactgctgctaatggagatctcacaccagagatgatcctcagcatgatggaccgctga
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integrated database retrieval system
