Xiphophorus maculatus (southern platyfish): 102233555
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Entry
102233555 CDS
T02923
Name
(RefSeq) collagen alpha-1(VIII) chain-like
KO
K23455
collagen type VIII alpha
Organism
xma
Xiphophorus maculatus (southern platyfish)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
102233555
NCBI-ProteinID:
XP_014330887
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Position
24:4929673..4947355
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AA seq
746 aa
AA seq
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MMAVPLHFFCHVVFLLQPYVMNTAHGGAYYGPKQPPQQQPQPIPQYSDDFPQQQFLGNEM
PHSPFSKGIPSLSQHGKDAPQLPLPLQIGKMRPLTKGKGQTFPRGSKGPLPVPGGKGFTD
GPQGIEGPPGPVGPPGPQGPPGLPGEGIPGSPGKPGPPGSQGYRGNGKPGMPGLPGKPGG
LGLPGAKGDLGPIGGQGPTGIPGPPGLPGPTGLPGISKSGGQGLPGLPGQPGEPGQNGPP
GFPGPPGLKGDKGLGLPGLPGVNGPGGTPGPPGQVGLPGNGKPGLNGVPGQPGFPGKPGP
PGEAGLVGAPGQRGQPGLPGVPGIGKPGKDGVRGLPGFSGGKGELGPPGLIGPPGLPGYG
KTGFPGPKGHKGHAGLPGQPGPRGDKGQVGQPGIIGLTGLTGIPGAPGPTGPPGSIGFPG
QKGEDGTFGPRGNPGMKGETGPPGLSGQPGRPGEGGQPGQRGFQGPIGPKGEAGARGLPG
APGAAGLQGPRGEGGESGNKGQPGPQGIPGLTGPGGPIGPPGHSGQKGETGPTGNPGYPG
NGAPGTPGQIGPQGNPGPSGPPGLTGQPGPPGPPGPPGIPAESPDIIQFLPHTGPYNGQV
YKKPGNGVEIRGTKQQIPAFTAKLTNPFPLVGSPITFDKLLHNENQDYNPQNGIFTCSVP
GIYYFAYHVHCKGGNVWVALMKNSESVMYTYDEYKKGLLDQASGSAVLPLRKGDTVHVEL
PSDQAAGLYAGQYVHSTFSGYLLYLM
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgatggctgttcctctccatttcttctgccatgttgtctttctactccagccgtatgta
atgaacacagctcatgggggagcatattacggaccaaagcagccgcctcagcagcagcct
cagcccatcccgcagtacagcgatgacttccctcagcagcagttcctggggaacgagatg
ccacattcacctttcagcaaagggatcccgtcgctgtcccagcatggaaaagacgctcca
caactgccgttgcctttgcaaattggaaaaatgaggccattgacaaaaggcaaaggacaa
accttcccaaggggatctaaaggtcctcttcctgttcctggtgggaaaggtttcacagac
ggacctcaaggcattgaaggcccccctggaccagtgggcccaccaggtccacaaggcccc
cctgggcttccaggagaggggattcctggatcaccaggaaagccaggtcccccgggttct
cagggatacaggggaaatggaaaacctggaatgcccggattacctggaaaacctggaggc
cttggattaccaggagccaaaggggatcttggaccaattggtggtcaggggccaacagga
attcctgggcctccaggactcccaggtcccactggactccctggaatttcaaaatcagga
ggccaggggttaccaggactgccagggcaaccaggagaacctggacaaaatggtccacct
ggatttcctggtcctccaggtctaaaaggcgataaagggcttggtctgcctggtttacca
ggtgtgaatggaccaggtgggacacctggtccacctggacaagtgggcctccctggtaat
ggcaaacctggtctgaatggtgtacctggacaaccaggatttccaggaaaaccaggtcct
cctggagaagcagggcttgtaggagcaccaggtcaaagagggcaaccaggacttccaggc
gtaccaggaataggaaaaccaggaaaagatggtgttagagggttaccagggttctctgga
ggaaaaggtgaactagggcctcctggtttaattggaccaccaggcttgccaggttatggt
aaaacaggatttccagggcctaagggtcacaagggacatgctggtcttccaggacaacca
ggcccaagaggtgacaaaggtcaagtaggtcaacctggaattattggtctaactggtttg
acaggaatacccggggcaccagggcccactgggcctcctggtagtattggcttcccagga
cagaagggagaagatggcacatttggccctagaggaaatcctggaatgaaaggtgaaact
ggacctcctggtctttcaggacagccaggtaggccaggagagggtggacaacctggacaa
agaggattccaagggccaatagggccaaaaggagaagctggggctagaggtttacctggt
gcccctggtgctgcaggattacaaggaccaagaggagagggaggagagtctggaaacaag
ggccaaccaggtccacaggggatccctggacttacaggaccagggggaccaattggacct
cctggtcattcaggacaaaaaggtgaaacaggaccaacaggtaaccctggttatcctggt
aatggggccccaggaacccctggtcaaattggtcctcaaggaaaccctggtcccagtggt
cctcctggacttactggacaacccggccctccaggtcctcccggccctccaggaatacct
gctgaatctcctgacattattcaattcctccctcacacaggcccctacaatggacaagtt
tacaaaaagccaggcaatggagtcgagattagaggaaccaagcagcagattcctgcattc
accgcaaaactgaccaatccattccctctagtaggttcaccaatcacatttgacaaactt
ctccacaacgaaaatcaggactacaatccacaaaatggtatttttacatgtagtgtacca
ggaatctattattttgcttaccacgtccactgcaagggaggcaacgtttgggtggcgctg
atgaagaacagtgagtcagtaatgtacacttacgacgagtacaaaaagggtttgcttgat
caggcttcaggaagcgctgtactcccgttgagaaaaggagacactgttcatgtagagctt
ccatcagaccaggcagcaggactttatgctggtcagtatgtccattccacattttctgga
tacttactgtacttgatgtaa
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