Xiphophorus maculatus (southern platyfish): 102234408
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Entry
102234408 CDS
T02923
Name
(RefSeq) collagen alpha-1(XXI) chain-like
KO
K16629
collagen type XXI alpha
Organism
xma
Xiphophorus maculatus (southern platyfish)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
VWA
VWA_2
Motif
Other DBs
NCBI-GeneID:
102234408
NCBI-ProteinID:
XP_023181700
Ensembl:
ENSXMAG00000013932
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Position
21:21745042..21802671
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AA seq
940 aa
AA seq
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MLLWSVWSVMLLLAAAEAVENEDVRAGCSTAVNDLVYIVDGSWSVGPDDFETAKLWLINI
SSQFDISLHYSQVAVVQYSDTPRLEIPLGTHHSGVQLIQAIHNINYLGGNTQTGRAIKFA
VDHVFSASQRVSQVKNRIAVVVTDGKSQDDVVDASTEARAQGITVFAVGVGSEITTSELI
SIANVPSSTYVLYAQDYTNIDRIRDSMEQKLCEESVCPTRIPVASRDEKGFELMLGMNIQ
KKAKKISGSLASEAAYALTSSTDVTENTREIFPEGLPPSYVFVATIRLKGNSSQLIFDLW
RVLSKSKEIQAAVTLNGKDQSVIFTTTSVTEAEQKAIFKKGFKTLYDGKWHQLKILVSPQ
HAVSFLDDKLIQEIALKPVEPIYINGKTQIAKKRGSQVTVPVEIQKLRLYCDPHQSERET
ACEIYSVDDERCPLNRTATVEQEEEDCNCALGPPGQRGPPGRMGFRGEKGREGPPGPDGK
PGKQGIPGYAGPPGFPGIKGEEGPQGLRGEAGVKGNKGDQGKPGLTGEPGPTGPQGLPGE
RGEPGPVGQTGLKGETGPPGMDGAAGLTGQKGEMGDVGPAGDVGPKGAPGPIGPPGETGP
QGSPGEQGLAGLQGPPGPKGNLGVHGPQGPPGEIGRAGPKGSCGEPGVLGPPGLPGLKGL
VGEPGFPGQPGVLGRPGLKGHKGDRGESGSKGNRGQRGEDGEPGTPGIPGDVGSKGWKGE
RGLKGESGPRGPEGKKGDTGHLGIVGPRGFPGQDGLPGQPGQPGYPGKPGKSPSDEHLVK
MCADVLRNQLPAFLQSLALQATCESCNTVKGPPGEPGAPGPKGSMGAAGYPGRSGAPGYP
GPPGMQGPAGIKGDIGERGPKGSKGEGYKGPPGPPGQPGMQGPRGFDGIGYPGSQGIQGK
PGLQGDPGKQGIPGLPGVCDVSMCYRTYNHRQHYNKGPDV
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgttgctgtggtcagtatggagtgtgatgttgctactggcagcagcagaagctgtggag
aatgaagatgtccgagccgggtgcagcacagctgtaaatgacctggtgtacattgttgat
ggttcttggagcgtcggcccggatgactttgaaaccgccaagctgtggctcatcaacatc
agcagccagtttgacatcagccttcattattcgcaggtggctgtggtccagtatagtgac
acacccagactggaaataccgctggggacgcaccatagtggagtacaactcatccaggcc
atacacaacatcaactacctgggagggaatacgcagactggcagggccatcaagtttgca
gtggaccatgtgttctctgcctctcagcgggtcagccaggtcaagaaccgtatagcggtg
gttgtcacagatggaaaatctcaggatgatgtggtggatgcaagcacggaggctcgagct
cagggtattacggtgtttgcagtgggagttggcagtgagatcaccacctcagaactgatt
tctattgccaatgtgccgtcatctacatatgtcctgtatgcccaagattacaccaacatc
gaccggatccgagactcaatggaacagaaactatgtgaagaatcggtttgccccacaagg
atcccagtggcctctcgtgatgagaagggctttgagctgatgttgggcatgaacattcag
aagaaggctaagaagatttctggctcccttgcttcagaggcagcctacgctctcacttcc
tccacagacgttaccgagaatactagagaaattttcccagaaggtcttccgccttcgtac
gtatttgtggccactatacgtctgaaggggaactctagccagttgatctttgacctttgg
agggttttgtccaagagtaaggaaatccaggctgcggtgacactcaacggaaaagatcag
tcggtcatcttcaccaccaccagtgtgacagaagcagagcaaaaagccatctttaaaaaa
ggcttcaagacgctgtatgatgggaaatggcatcagctgaagattctggtgagccctcag
catgctgtcagttttctcgacgacaaactgatccaggagatcgcgctaaaacccgtggag
cccatttacatcaacggaaagacgcagattgctaagaagcgggggtcacaggtcactgtg
ccggtggagatccagaagttgcgtctgtactgtgatcctcaccagagcgagagagaaact
gcttgtgaaatctactctgtggatgatgaaaggtgtccgctgaatcgaacagccaccgtg
gaacaagaagaagaagactgcaactgtgcactcggcccaccagggcagcgtggcccaccg
ggacgcatgggtttcagaggtgaaaaagggagggaaggaccgccaggacctgatggtaag
cctggtaaacaaggtatacctggctacgccggccctcctggatttccagggataaaaggt
gaagaaggcccccaaggactaagaggagaggctggtgttaaaggtaacaagggagaccaa
gggaaaccaggtctaactggagaacctggaccaacaggaccacagggacttcctggggag
agaggtgagccaggacctgtaggacaaactggtcttaagggggaaacaggaccaccaggc
atggacggagcggcaggactaacaggacagaagggggagatgggtgatgttggaccagct
ggtgatgttggacctaaaggtgccccgggtcccatcggacctcctggtgaaacgggccca
cagggatctccgggtgaacaaggcttagctgggcttcagggaccacctggtccgaaagga
aacctgggagttcatggaccccaggggccccccggagaaattggcagagctggtcccaag
ggttcatgtggtgaaccaggagttctcggcccccctggtcttccaggactaaaaggtttg
gtgggggagccaggctttccgggccaaccgggtgttttagggcggccaggcttgaaaggt
cataagggggacagaggagagagcggctccaaaggaaaccgggggcagcgaggagaagat
ggagaaccaggaactcccggcatacctggtgatgtgggatccaaaggatggaaaggagag
aggggattgaaaggtgaaagtgggccaagagggccagaagggaagaagggtgatacaggc
catttgggtattgttggtccccggggatttcctggtcaagacggacttccgggtcagccc
ggccaacctggatatcctggaaaacctggcaaatctccttcagatgaacatcttgttaag
atgtgtgcagatgttttgcgcaaccagctcccagcgttcctccagagcctcgccctccaa
gcaacgtgcgagagctgcaacaccgtgaagggacccccgggtgagcccggagcaccaggt
cccaaggggtccatgggagctgcaggctaccccggaagaagtggtgctccaggttaccca
ggacctcctggaatgcagggtccagcaggcatcaaaggggacataggagagagagggccc
aaaggcagcaaaggagaaggttacaaaggacccccaggacctcctggacagccagggatg
cagggtcctcgaggctttgacggtattggctatccaggaagtcagggaattcaaggaaaa
cctggactacaaggagatcccggtaaacagggcatccctggtcttccaggagtttgcgat
gtgtccatgtgttatcggacctacaaccacaggcaacattacaataaagggccggatgtc
tga
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