Xiphophorus maculatus (southern platyfish): 102234457
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Entry
102234457 CDS
T02923
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1D-like isoform X1
KO
K04851
voltage-dependent calcium channel L type alpha-1D
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04010
MAPK signaling pathway
xma04020
Calcium signaling pathway
xma04218
Cellular senescence
xma04260
Cardiac muscle contraction
xma04261
Adrenergic signaling in cardiomyocytes
xma04270
Vascular smooth muscle contraction
xma04530
Tight junction
xma04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102234457
04020 Calcium signaling pathway
102234457
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
102234457
09144 Cellular community - eukaryotes
04530 Tight junction
102234457
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
102234457
09153 Circulatory system
04260 Cardiac muscle contraction
102234457
04261 Adrenergic signaling in cardiomyocytes
102234457
04270 Vascular smooth muscle contraction
102234457
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xma04040
]
102234457
Ion channels [BR:
xma04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
102234457
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
Ca_chan_IQ
GPHH
PKD_channel
FAM176
Motif
Other DBs
NCBI-GeneID:
102234457
NCBI-ProteinID:
XP_023180255
LinkDB
All DBs
Position
20:18063220..18134827
Genome browser
AA seq
2138 aa
AA seq
DB search
MSANGPAPEPAPEAPPISTPAPASAPTPAPAPAPPPPAPPAPTSSTIPVGALAQKKRQQY
AKSKKQGSNANSRPPRALFCLKLNNPLRRACISVVEWKPFDIFILIAIFANCMALAVYVP
FPEDDSNSTNHDLETVEYAFLIIFTIETFLKIIAYGLVMHQNAYVRNGWNMLDFVIVVIG
LFSVVLEFLTKEDKGEGDRESSHPSTHGHGGKPGGFDVKALRAFRVLRPLRLVSGVPSLQ
VVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFIGKMHATCYIGGTDLVAEDDPAPCA
ISGHGRQCPINGTQCREGWHGPNGGITNFDNFLFAMLTVFQCITMEGWTDVLYWMNDAMG
FELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEEDLKGY
LDWITQAEDIDPDNEDEAEEGSKRNRVTLADLTEKKKGRFGWFSQSSDTHASVPASETES
VNTENQNGEEEKTPCCGPLCQKISKSKFSRRWRRWNRFCRRKCRLAVKSVPFYWLVIILV
FLNTLTISSEHYNQPMWLTQVQDVANKVLLALFTCEMLVKMYSLGLQAYFVSLFNRFDCF
VVCGGITETILVELEIMSPLGISVFRCVRLLRIFKVTRHWQSLSNLVASLLNSMKSIASL
LLLLFLFIIIFSLLGMQVFGGKFNFDETQTKRSTFDNFPQALLTVFQILTGEDWNAVMYD
GIQAYGGPSSTGMVVCFYFIILFICGNYILLNVFLAIAVDNLADAESLNTDEGDKKEDKK
DDDKDEKEEEEEDNDDNGGDEEDPEVPSGPRPAIADLVKKEKIIPIPEGSAFFIFSNTNP
VRVFCHQLINHHIFTNLILVFIMLSSVSLAAEDPIRNFSARNIILGYFDYAFTAIFTVEI
VLKVLGYADYVFTSMFTFEIVLKMTTYGAFLHKGAFCRNYFNLLDLLVVGVSLVSFGIQS
SAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGV
QLFKGKFYRCTDEAKSSPVECKGTYILYKDGDVNQPTIHRRVWHNSDFNFDNVLMAMMAL
FTVSTFEGWPALLYKAIDSNRENLGPIYNYRVEISIFFIIYIIIIAFFMMNIFVGFVIVT
FQEQGEKEYKNCELDKNQRQCVEYALKARPLRRYIPKNPYQYKFWYVVNSTGFEYIMFVL
IMLNTLCLAVQHYGQSALFNYVMDILNMVFTAVFTVEMVLKLIAFKPRHYFADAWNTFDA
LIVVGSVVDIAITEVNKLVEPTETPQVDEMGNTEDSARISITFFRLFRVMRLVKLLSRGE
GIRTLLWTFIKSFQALPYVALLIAMLFFIYAVIGMQVFGKIAMVDGTQINRNNNFQTFPQ
AVLLLFRCATGEAWQEIMLACMPGKLCDPESDYNPGEEMTCGSGFAIIYFITFYMLCAFL
IINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWSEYDPEAKGRIKHLDVVTLLRRIQP
PLGFGKLCPHRVACKRLVAMNMPLNSDGTVMFNATLFALVRTALKIKTEGNLEQANEELR
AVIKKIWKRTSMKLLDQVVPPAGDDEVTVGKFYATFLIQDYFRKFKKRKEEGLVTAHPSQ
NNTAIALQAGLRTLHDIGPEIRRAISCDLQDDELVDFIPEEDEEIYRRNGGLFGNHLMNG
GHRRANGHQTNTTQRPLQVQPPPHYAHMEQPVGRLSRANAMAHPNHHHHHHHHHHRHHNS
YGKSPKSTNINLNNANMSSLPNGGHHIYYERAPPNGYPGLRTSYYDYNKPRTPQGQRRRY
YETYVRSQRGDGHHPIIRREEEIDEDRFSGEYYSGEEFYEEDSMLSGDRYQTSDTEYETP
KGYHHPDSYYDDDEQPLYRDSRRSPKRRLLPATPQGHRRPSFNFECLRRQSSQDELPHQR
TALPLHLMQHQVMAVAGLDSSRVHCLSPTRSTRSWATPPATPASKDQSPYYTPLIRVDGP
HRESISGSHVSVRKSSWYTDDPEYSQRTYSPIHLQVPPEYHHQYHQKRGSATSLVEAVLI
SEGLGRYAKDPKFVAATKHEIADACEMTIDEMESAASHLLSEGIAPGINGVNVFPLLAPR
DYELPDTGASYSDEEPETEPRAPYEEDLADEMICITTL
NT seq
6417 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccaacgggcctgccccagaaccagccccagaagcccctcccatctcaacccct
gccccagcatcagcccctactccggccccagccccggcgccacccccacccgccccacct
gccccaacatcctctaccataccggtaggtgcgttggctcagaagaagcgacagcagtat
gccaaaagcaagaagcaaggcagcaacgccaacagcaggccaccgagggctcttttctgc
ctcaaactcaacaaccccttacgcagggcctgcatcagtgtggtggagtggaagccattt
gacatctttatattaattgccatttttgccaactgtatggccttagctgtctacgtccct
tttcctgaagacgattccaactccacaaaccacgatttggaaacagttgaatatgccttc
ctcatcattttcactattgagacctttctgaagattatcgcttatggtttggtgatgcac
cagaatgcatatgtgagaaatggctggaacatgctggattttgtcattgtggttatcgga
ctcttcagtgttgttttggaatttttgaccaaagaagataagggagaaggtgacagagag
agtagccatccgtcgacgcatggccacgggggtaaacccggtggatttgacgttaaagcc
cttcgagccttccgtgtgctgcgacccctgcggctggtctcaggagtacccagtttacag
gtggtgttgaactccatcattaaagccatggttcctctgctgcacatcgccctccttgtc
ttgtttgtcatcatcatctatgccattattggcctggagcttttcatcggtaaaatgcat
gcaacctgctatataggcggcacagatttggtagcagaggatgatccagctccctgtgcg
atctcagggcacgggcgccaatgccccatcaacggcacacagtgcagagaaggctggcac
ggccccaacgggggcatcaccaacttcgacaactttctgtttgccatgctgacggtgttt
cagtgcatcaccatggagggctggacagacgtgctctactggatgaacgatgctatgggc
tttgagcttccatgggtttactttgtcagtcttgtgatcttcggctcctttttcgttctt
aacctggttttgggtgtgttgagcggagagttctctaaggagagagaaaaagctaaagct
cgaggagacttccagaagctgcgtgagaagcagcagctggaggaggacctgaagggctac
ctggactggatcactcaggctgaagatattgaccctgacaacgaggatgaggctgaggag
gggagcaagcgaaaccgggtgactctggctgacctcaccgagaagaagaaaggaaggttt
gggtggttcagccagtcgtccgacactcatgcgagcgttccagccagtgaaacagagtct
gtgaacaccgagaatcagaacggagaggaagaaaagacaccctgctgtggacctttgtgt
cagaaaatctcaaagtcaaagttcagtcggcgctggcgtcgctggaacaggttctgccgc
aggaagtgccgtttggctgtgaagtcagtacctttttactggctggtcatcatcctggtg
ttcctcaacacactcaccatctcatcggagcattacaaccagcctatgtggttaacacaa
gttcaggatgtggcgaacaaggtgctgctggccctcttcacatgtgaaatgttagtgaag
atgtacagtctgggactgcaggcctactttgtgtccttgttcaaccgctttgactgcttt
gtggtgtgcggaggaatcaccgaaaccattctggtcgagctggaaatcatgtctcctctt
gggatttctgtgtttcgctgtgtccgtctcctgaggatctttaaggtcacgcggcactgg
cagtctctcagtaacctggtggcatctctgctcaactcgatgaaatcaattgcttccctg
ctgctgctcctcttcctcttcatcatcatcttctccctgctgggcatgcaggtgtttggt
gggaagttcaactttgacgaaacccagacgaagagaagcacctttgacaactttccccaa
gccctcctcactgtgtttcagatcctgactggagaagactggaacgctgtcatgtatgat
gggatccaggcgtacggaggcccctcctccaccgggatggtcgtgtgtttttacttcatc
attctcttcatatgcggaaactatatcctcctgaatgtcttcttggctatcgctgtggac
aacctggcagatgcagaatcactcaacacagatgaaggagacaaaaaagaggacaaaaag
gatgatgacaaagatgaaaaggaagaagaagaagaggacaatgatgacaatggaggagat
gaagaagacccagaggttccatcaggtcctcggccggccatcgctgacctggtaaagaag
gaaaagatcattccgatcccagagggaagtgccttcttcatcttcagtaacacaaacccg
gtgcgagtgttttgtcaccaactcatcaaccaccacatattcaccaacctcatcctggtg
ttcatcatgctcagctcggtgtcgctcgctgccgaagacccgatccggaacttctccgcc
cgcaacattatacttggttactttgactatgctttcaccgctatctttactgttgagatc
gtgttgaaggtcctaggctatgcagattatgtcttcactagtatgtttacatttgagatc
gtattgaagatgacaacatatggagcttttctccataagggagcattctgcaggaattac
tttaacctcctggatctcttggtggtcggggtttctcttgtctctttcggcattcagtct
tcggccatctctgtggtgaagattctccgagttcttcgagtgcttcgacccctgagggcc
atcaatagagccaagggccttaaacatgttgttcagtgtgtctttgtggcaatcagaact
attggcaacatcatgattgttaccactctacttcagtttatgttcgcttgtataggtgtc
cagctatttaagggaaagttttaccgctgcacagatgaggccaagtccagtccagtagaa
tgcaaaggcacatacatcctgtataaggatggagatgttaaccagccgacgatccacagg
cgggtgtggcacaacagcgacttcaactttgacaatgtccttatggccatgatggccctc
tttactgtttccacgtttgaaggctggccggcgttgctgtacaaagccatcgactccaac
agggagaatctgggacccatttacaactaccgtgtggaaatttccatcttcttcatcatc
tacatcattatcattgctttctttatgatgaacatctttgtgggttttgtcatcgtcaca
tttcaagaacaaggagagaaggagtataaaaactgtgaacttgacaagaaccagcgtcag
tgcgtggagtatgctctaaaggcccgtcccctgaggagatatattcccaagaacccatac
cagtacaagttttggtatgtggtgaactccactggctttgagtacatcatgtttgtgctc
atcatgctcaacacgctctgcttggctgtccagcactatggccaatcagcactttttaat
tatgtaatggacattctcaatatggttttcactgctgttttcactgtggaaatggttctc
aagctcatcgcattcaaaccgaggcactattttgctgatgcttggaacacttttgatgcc
ttaattgttgttggtagcgtcgtcgatattgctatcactgaagtgaacaaacttgtagag
ccaacggagactcctcaggtggatgagatggggaacacggaggacagtgctcgtatctcc
atcactttctttcgcctgtttcgagttatgcggttggtcaaactcctcagcagaggagag
ggtatccgcacattgctgtggactttcattaagtccttccaggctttgccatatgttgct
ctactgatagccatgttgtttttcatctatgctgtcatcggcatgcaggtttttggaaag
attgccatggtcgatggaacacaaattaacagaaacaacaacttccagaccttcccccag
gctgtgctccttctttttaggtgtgccacaggtgaggcatggcaggagataatgttggcc
tgtatgcccgggaaactgtgtgacccagagtctgactacaaccccggggaggagatgact
tgtggcagtggatttgcaataatttatttcattaccttctacatgctctgtgctttcttg
atcatcaatttgtttgtggccgtcattatggacaactttgactatttgacacgagattgg
tcaattcttggtcctcaccaccttgatgaatttaagaggatttggtcagagtatgatcct
gaggcaaaaggaaggatcaaacatctagatgtggtgactttgcttcgtcgtatccagccc
cctcttggttttggtaaactgtgtcctcacagagtagcatgcaagcggttggtggccatg
aacatgcctctcaacagcgatgggacggtcatgtttaatgctacactgtttgccctggtg
cgcacagctctgaaaataaaaactgaaggtaacctggaacaggccaatgaagagctgcgg
gccgtcatcaagaaaatctggaagagaactagcatgaagctgctggaccaagtggtgcct
cctgctggtgatgatgaggtaaccgtggggaagttctatgccaccttcctgatacaggac
tactttaggaaattcaagaaacgtaaagaggaaggcctggtgactgcacacccttcccag
aacaacacagccattgccctgcaggctggccttcgcacgctgcatgatattgggcctgaa
attcgccgagcgatatcatgtgacctgcaggatgacgagctagttgactttattccagag
gaagacgaggaaatttataggcgtaacggcggcctcttcggcaaccacctaatgaacggc
ggccatcggcgagcaaacggccatcaaaccaacaccacacagcgccccctgcaggtgcag
cccccgcctcattatgctcacatggagcagccagtggggcgtctttctcgagctaatgca
atggctcaccccaaccaccatcatcaccatcaccaccatcatcaccgccaccacaactcc
tatggcaaatctcctaaatccaccaacatcaacttgaacaacgccaacatgtccagtctg
cccaatggaggacaccatatctactacgaacgcgctcctccaaacggatacccaggttta
cgcacctcctactacgactataacaagccacggacgccccagggtcaaagaaggcgctac
tatgagacgtatgttaggtcccagagaggagacggccatcaccccatcatccgcagggaa
gaggagattgatgaggatcgcttctctggggaatattacagcggagaggagttttacgag
gaggacagcatgttgtcaggggacagatatcagaccagtgacacggagtatgaaactccg
aaaggctaccatcaccctgacagttactatgacgatgatgagcagcctctctaccgggac
tcacggaggtcaccaaagagaagactgcttcctgccacacctcaaggtcacagaaggcct
tcctttaactttgagtgtttgcgcagacaaagtagccaggatgagcttccacatcagcgt
actgctctaccactgcaccttatgcagcatcaggtaatggctgtagcaggcctggactcc
agcagagtccactgcctctcccccacccgctccactcgctcctgggccacccctcccgcc
accccagccagtaaagaccagtcgccatactacacccccctcatccgcgtggacggtcca
cacagggagagcatctctggcagccacgtgtctgtgcgcaagagctcctggtacacagac
gatccagagtattcccaaaggacgtattcgcccatccacctgcaggttcccccggagtac
caccaccagtaccaccagaagagaggcagcgccaccagccttgtagaagcggttttgata
tcagagggtctcgggagatacgccaaggatcccaagtttgttgctgccacaaagcacgag
atagcagatgcatgtgagatgacaatagacgagatggagagtgcagccagccacctgctg
agcgaagggatcgctcccggcatcaacggggtcaacgtgttcccccttctggcccccagg
gattatgagctgccggacaccggagccagttacagtgacgaggagccagagaccgaaccc
agagctccttacgaggaggacctggcagatgagatgatctgcattacgactttatag
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