Xiphophorus maculatus (southern platyfish): 102236029
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Entry
102236029 CDS
T02923
Name
(RefSeq) LOW QUALITY PROTEIN: nucleolar transcription factor 1-A-like
KO
K09273
upstream-binding transcription factor
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xma03000
]
102236029
03021 Transcription machinery [BR:
xma03021
]
102236029
Transcription factors [BR:
xma03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
102236029
Transcription machinery [BR:
xma03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
102236029
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_5
HMG_box
HMG_box_2
DUF4473
Motif
Other DBs
NCBI-GeneID:
102236029
NCBI-ProteinID:
XP_023191534
Ensembl:
ENSXMAG00000012822
LinkDB
All DBs
Position
6:29996835..30005647
Genome browser
AA seq
829 aa
AA seq
DB search
MAPRARWRPGPVSTAGPGSTENPTWFLETEPEPVRFRTTRSGVPSCCCCCISQTAAAQSC
PLPASRGGGSTTSSRSPDPTQREVLEGSLVKLCSSKSSGRASVTMNGSSSISAAQRIKAE
TDAWSQEDCLTLLERIRGLLPDGDAMKYKTTESHFDWDKVGFGRFTGDMCRQKWQKVSSE
VRKYRTMTELIVDAIEFVKNPYKGKKLKTHPDFPKKPLTPYFRFFMEKRAKYAKIHPEMS
NLDLTKILSKKYKELPDKKKQKYITEFQREKEEFEKNMARFREEHPDLMEERKKSDLPEK
PKTPQQLWYNHEKKAYMKLHPEVSQKELKEALRRQWSQLSDKRRLKWISKALELQKDYED
SMRAYHEAHPDSNSEEHVRSVLTKAERQLKDKFDGRPTKPPPNGYSLYCAELMVNMKDVP
STERMVLCSKQWKMLTQKEKDMFQKRCEQKKKQYDVDLQRFLESLPEEERDRVLTEEKMG
GAKLNVGVVPSPLRAKSPSVKVPPEPQPEPEPGGXLSPASVLLQERGREAEPEAWPAAAG
GASAPRERRDARKTAKLPETPKTAEETWQHSVTGDYLAKYRSDRRKAQAAMEAAWRSMEK
KEKIPWIKKAAEDQKRYERELLEMRAPPVGQRKPKFDGEPKKPPVSGYQMFSQELLTNGE
LNHFSLKERMVEIGKRWQKLSQAQKDKYKKQVEEQQVEYKAHLEAWVKSLSPQDRAVYKE
FSSSKRRSSSSKATASPVAKVRVTAKGKVGGARAVTPGVTVGKRAMAYRAKQDMSDSDEE
EEKSGSSDSDEDDETSGSSDSEDEDENDDDEEEDDDQSSSEESSELDSD
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggcccccagagctcggtggagacccggacccgtcagcacagcaggtcccggttcaaca
gaaaaccccacatggtttctcgaaacagaaccagagccggtccggttcagaacgacacgg
agtggagttcccagctgctgctgctgctgcatcagccagaccgctgctgctcagtcctgc
cccctaccggccagccgaggaggaggcagcaccacctcctccaggagtcctgacccgacc
caaagggaggttctggagggttctttggtgaaactatgctcatctaaaagtagcggcaga
gcctccgtcacgatgaacggcagcagcagcatctctgcggctcagaggatcaaggctgaa
acagacgcgtggagccaggaggactgcctgacgctgctggagcggatccgcggtctgctg
cccgacggagacgccatgaagtacaaaaccaccgagtcgcacttcgactgggacaaggtc
ggcttcggccgcttcaccggggacatgtgccgccagaagtggcagaaggtctcctccgag
gtccggaagtaccggaccatgacggagctcattgtggacgccattgagtttgtcaagaac
ccgtacaaaggcaagaagctgaagacccacccggacttccccaaaaagccgctgactccc
tacttccgcttcttcatggagaaacgggccaaatacgccaagatccatccggagatgagc
aacctggacctcaccaagatcctgtccaagaagtacaaggagctgccagataagaagaag
caaaagtacatcacagagttccagcgggagaaggaggagtttgagaagaacatggcccgg
ttcagggaggagcatccggacctgatggaggagaggaagaagtcggacctgccggagaaa
cccaagacgccccagcagctgtggtacaaccacgagaagaaggcctacatgaagctgcac
ccagaggtgagtcagaaggagctgaaggaggcgctgaggaggcagtggtcccagctgtcc
gacaagcgcaggctgaagtggatcagcaaggcgctggagctgcagaaggactatgaggac
agcatgagggcgtaccacgaggcccacccagactccaactcagaggaacacgtccgctct
gtcctcaccaaggccgagagacagctgaaggacaagttcgatggacggcccaccaagccg
ccgccgaacggttactccctgtactgcgctgagctgatggtcaacatgaaggacgtgccg
agcaccgagcgcatggtgctgtgcagcaagcagtggaagatgctgacccagaaggagaag
gacatgttccagaagcgctgcgagcagaaaaagaagcagtacgacgtggacctgcagcgc
ttcctggagagccttcctgaggaggagcgggaccgagtcctgacagaggagaaaatgggc
ggagccaagctgaatgtgggtgtggttcccagccctctcagagccaagtctccatcggtc
aaggtgccgccagaaccacaaccagaaccagaaccaggtggctgactgagcccagcttct
gtcttgcttcaggagcgcggccgggaggcggagccagaggcgtggccagcagccgcaggc
ggagcctcagcgcccagagagcgacgggacgccaggaagacagcgaagcttccagagacg
ccgaaaaccgccgaggagacgtggcagcacagcgtgacaggagattacctggccaagtac
cggagtgaccgcaggaaggcgcaggcggcgatggaggcggcttggcgctccatggagaaa
aaggagaaaattccctggatcaagaaagcagcagaggaccagaaacgttacgagagggag
ctgttggagatgagagcgccccctgtcggccagagaaagcccaagttcgatggggagccg
aagaagcctccagtgagcggctaccagatgttctcccaggagctgctgacgaacggagag
ctgaaccacttcagtctgaaggagcgcatggtggagatcggcaagcgctggcagaagctc
agccaggcgcagaaggacaagtacaagaagcaggtggaggagcagcaggtggagtacaag
gcccacctggaggcctgggtcaagtcgctgtccccacaggaccgcgccgtctacaaggag
ttctcctcctcgaaacgtcgcagcagctcctccaaagccaccgccagccccgtggccaag
gtccgggtgacggcgaaggggaaggtgggcggagccagggctgtgaccccaggggtcacc
gtggggaagagggccatggcatatcgcgccaagcaggacatgtctgactccgatgaggag
gaggagaagagcggttcctcagactctgatgaagacgatgagacatcaggaagttcagac
agcgaggatgaagatgagaacgatgacgatgaagaggaggatgacgaccaatcttcctcg
gaggaatccagcgagttggactcagattag
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integrated database retrieval system
