Xiphophorus maculatus (southern platyfish): 102236110
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Entry
102236110 CDS
T02923
Name
(RefSeq) retinoic acid receptor gamma-A isoform X2
KO
K08529
retinoic acid receptor gamma
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xma03000
]
102236110
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
xma03310
]
102236110
Transcription factors [BR:
xma03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
102236110
Nuclear receptors [BR:
xma03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
102236110
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
PRIMA1
Mito_fiss_reg
Motif
Other DBs
NCBI-GeneID:
102236110
NCBI-ProteinID:
XP_014329647
Ensembl:
ENSXMAG00000001599
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Position
1:15788573..15845517
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AA seq
503 aa
AA seq
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MFDCMEALGMGPRQLYDVTSRGACMLRKASPFFPALDPFAWTGSASVRSVETQSTSSEEM
VPSSPSPPPPPRVYKPCFVCQDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRDKNCQ
INKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKDVKEEVVLPESYELSGELEELVNK
VSKAHQETFPSLCQLGKYTTNSSSDHRVQLDLGLWDKFSELSTKCIIKIVEFAKRLPGFT
TLTIADQITLLKSACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVF
AFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPEKVDKLQEPLLEALKIYARRRRPNK
PHMFPRMLMKITDLRGISTKGAERAITLKMEIPGPMPPLIREMLENPDAFDDQTECNENA
PPPPPPPPPPPPPALVVKQEAEDEDDSWGTENCSEPSPEEEDEDDDDDLGDEERDRGSDS
DGEPWGVLDNLDGSRKGLVGRAQ
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgtttgactgcatggaagccctgggaatgggcccccgtcagctctatgatgtcaccagc
cgcggtgcgtgcatgctgcggaaggcgagccccttcttcccggctttggaccccttcgcc
tggacgggcagtgccagtgttcggtcggtggagacccagagtaccagctcagaggagatg
gtacccagttcgccatctccccctcccccacctcgtgtctacaaaccctgctttgtgtgc
caggacaagtcctcagggtaccactacggggtcagttcctgcgagggctgcaagggtttc
ttccgtcgcagtatccaaaagaacatggtgtacacctgtcaccgagacaagaactgccag
attaacaaggtcacacgcaaccgctgccagtactgcaggctgcagaagtgctttgaggtc
ggcatgtccaaggaagcggtgcgcaatgacagaaacaagaagaagaaggatgtgaaggag
gaggtagtgctaccagagagctatgagctaagtggagagcttgaagaactggtcaacaaa
gtcagcaaagctcaccaagaaacatttccttcactttgccagctgggaaaatacaccacc
aactctagctcggaccaccgtgttcagttggatctgggtctctgggacaagttcagtgag
ctctccaccaaatgcattatcaagattgtggagtttgccaagcgcctgccaggcttcacc
accctcactattgccgaccaaatcactctgctgaagtcggcctgcctggacattctgatg
ctgagaatctgcacacgctacacccctgaacaggacactatgaccttctcagacggcctg
actttgaaccgaactcagatgcacaacgctgggttcggaccactcacagacctggtgttt
gcctttgccggccaacttctacccctggagatggatgacactgaaactggtctcctcagc
gccatctgcctcatctgtggagatcgcatggatctcgaggagccagaaaaagtggataag
ctacaagagcctctgctagaggctcttaagatctacgctcgtcgccgtcgccccaacaag
ccccacatgttccctcgcatgttgatgaagatcactgacctcagagggatcagcacaaaa
ggtgcagaaagagccatcactctgaagatggagatccctggcccgatgcctcctctgatc
agggagatgcttgagaaccccgacgcgtttgatgaccaaacggagtgcaacgagaacgcg
ccgcccccgccacctccgccgccgccgccgccgccgccagcgttggttgtgaagcaagag
gctgaggacgaggacgacagctggggcacagaaaactgcagcgagccatcaccagaagag
gaggatgaggacgacgacgacgacttgggagacgaggagcgagaccgaggctcggacagt
gacggggagccctggggagttttggataacttagatgggtcaaggaaaggccttgtgggg
agggcgcagtaa
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