Xiphophorus maculatus (southern platyfish): 102236424
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Entry
102236424 CDS
T02923
Name
(RefSeq) AT-rich interactive domain-containing protein 1A-like
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102236424
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xma03000
]
102236424
03021 Transcription machinery [BR:
xma03021
]
102236424
03036 Chromosome and associated proteins [BR:
xma03036
]
102236424
Transcription factors [BR:
xma03000
]
Eukaryotic type
Helix-turn-helix
ARID
102236424
Transcription machinery [BR:
xma03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
102236424
Chromosome and associated proteins [BR:
xma03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
102236424
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
102236424
NCBI-ProteinID:
XP_014326952
Ensembl:
ENSXMAG00000012041
UniProt:
M4AC79
LinkDB
All DBs
Position
13:27706796..27779907
Genome browser
AA seq
2282 aa
AA seq
DB search
MAAQVASVAALNTSPPSELKKPDRDPQDESVPGEKQHENRDTGPDAGSPVQKELQDGSDD
GNTGGGGDPDMKNGNGNLPRVNNNSSNQNDTGGPEGNNLPGLGHHHPGPFPPPPYGYNQP
YSRGPFPQHGGQQSPGMAAASGPGMMDPYPANSHEHGYHNNYNSYTPFQNRTSYQGQGYG
PMSSPRNNQPPAAGGQPGKQQQQPAGGTTAMAASYSNQRYNMGNQQPTSTPTLNQLLTSP
SSARSYSSYPQGDYNNQEGANKGVGDMSSTQFGGVHPGWQQRTHHPSPMSPGNTGQPGSR
NQPPSPMDQVGKMRGQPYGGPNPYSQHQQGPSSAPGPQQGGSYPAQSYGAPGPQRYPMGM
QSRTPGTMGGMQYGQQMSAYGQQGPGGYGQQNQGYYSQHGPPPHPGQQQPPYSGQTQGSS
AAPYSQQGHPSQPPGQHAQSGPPYQQSPGPHGPAAGQPSYSQPPQSHSGQPPYVSPQQQQ
QTQQQQQQGPGPQSQQGPQGQPGYQQATGPGQTPQQQTPPQQQGPPQQLGGPPPQAQQPP
GHGQQSQQSPYSQTPPLQQPPQQQQQQPQQQQSPYQRFPPPPQELSQDSFSSQSSAPPSN
QPTKSGQEDSMQGRPSSLPDLSGSIDDLPTGTEAVLSPGVSTSGVSSSQGEQSNPAQSPF
SPHTPPHLPGIRGPSPSPVGSPASVTPSRSGPLSPAAVPGNQMPPRPPSVQSDSMMHSSM
NQSPMGPDRVYMRNPQMPPYGSPGQPGSALSPRQSTGGQIHSGMGPYPQNSTMGNYGPQG
AQYGPQGYPRQPGYTGMPNTNYPSGPGMGGSMNPMPAQGSGSPYGSMPPGRIGPGQMGTR
PYGPGMGPNMGSMPPQVGSGMCPPPGMNRKDGGPTMHHGPANSIHTRPPGYPNVNQGMMG
SAPPYGPGMNSMHSVMNQGAPGPYPVGGNMANNNPGMAPGSEFGMDKINPAQKINNKVDG
TPKPESKKKSSSSTITNEKITRLYELGPEPERKMWVDRYLAFAEEKAMGMSNLPAVGRKP
LDLFRLYVSVKEIGGLTQVNKNKKWRELATSLNVGTSSSAASSLKKQYIQCLYAFECKIE
RGEDPPPDFFNTDTKKNQPKIQPPSPAGSGSLQGPQTPQSATSSMAEGDLKPPTPASTPH
SQMPPMPGVRSSVNLQDPFADGGDPAFSRRNTMTPNSQGYQPGMGGPEMMSRMAPYESNK
DPFGGMRKAGEQFMPPNPNSGMGEQYNRGPPGPMGNMPMGQRQQYPYGYDRRQEPGMGPE
GNMGPAAPQPSMMPSGSDAGMYSPSRPPPQQRHDSYTNQYPGQGAPPGGPYPNQQPGMYA
QQQPNYKRPVEAGYGPPAKRHEGEMYNVPYSGQQQPGPQSSGHQGQQDIYNQYNTYPGGE
RRPPGPQGQFPFPFGRDRGPSSAGPNSQSHMPPQMMTSSMPSGPDGPQGPVWQGRNEMGY
PNYPNRQGPPVPGQGPGYHGMNRSGEEMMPSDQRINHEGQWPGHVNQRQPPFGPASSGPP
MTRPLPSTYQTSQNHIPQVSSPAPMSRSMETRTSPSKSPYMHPGIKVQKAGPPVPASHIG
QAPVQQPMIRRDVAFPPGSVEATQPHLKPRRRLTMKDIGTPEAWRVMMSLKSGLLAESTW
ALDTINILLYDDGSITTFNLCQLPGFLELIVEYFRRCLIEIFGILKEYEVGDPGQRTLID
PNAAEDSDDEIPIPECEDMDTDEEEDEDEENEEKKTNHDASSQVKVKEEEEESSMKDKSS
EDDDEEEKRESSTKEASSSTSGSSQDPNIHLEKPKQASKFDKLPIKVVRKKNPFRLNHLS
KLGQRQSFDSGLIHWSIGGGDTTEHIQTHFESQMDLLKQRKRTLPATEGRKKVKLLGTTE
NPEKSKFCLEEKVQQQQAQCSDPNKASTEKSPSSLSLCAPVTATIDDVLSARPGSVTMEV
VRGGAEEQKENGKYLFSINPDPQSRRNVKILEDEPHSKDETPLSTLSDWQDSLARRCICV
SNIIRSLSFVPGNDLEMSKHPGLLLLLGRLVLLHHRHPERKQAPVTYEKEEEEDEGVSCD
RDEWWWDCLEVLRENCLVTLANISGQLDLSIYPESICLPLLDGLLHWAVCPSAEALDPFP
TLGPHSSLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYGSLVRLVGERKVAVCR
EMAVVLLANLAQGDSLAARAIAVQKGSVGNLLGFLEDSLAATQYQQSQSSLLQMQGSPHF
EPTSVDMMRRAARALHALAKVEENHSEFTLYESRLLDISVSPLMNPLVSQVICDVLFLIG
QS
NT seq
6849 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaggtcgccagcgtcgctgctctcaacactagcccgccttccgaactcaaa
aagccggaccgggacccacaggacgagtcggtaccgggcgagaagcagcatgaaaacagg
gacacgggacctgacgcgggatctccggttcagaaggagctgcaggacgggagcgatgat
gggaacactgggggaggaggggatcctgacatgaagaacggcaacgggaatctacccagg
gtaaataataacagcagcaatcagaatgatacaggcgggcccgaaggaaataacctgccc
gggctgggccaccaccaccccggaccctttcctccacctccttacggctacaaccagccc
tacagccggggcccttttcctcaacatggcggacaacaaagccctggcatggcagctgca
tcggggccgggcatgatggacccttaccccgctaactcacacgaacacggctaccacaac
aactacaacagctacaccccgttccaaaacaggacttcctaccagggccagggatacggg
cccatgagctccccgcggaacaaccagcctccggcggctggggggcagccaggcaagcag
cagcagcagccagcaggaggaaccaccgctatggctgcctcctacagcaaccagaggtac
aacatggggaaccagcagcctacatccacgccaactttgaaccagctcctgacatccccc
agctccgccaggagctactccagctacccccaaggagactacaacaatcaagaaggggcc
aacaagggagtaggagatatgagcagcactcagtttggtggggtccatccgggttggcaa
caaaggacccaccacccctctcccatgagcccgggaaacactggacagccaggcagcagg
aaccagcctcccagcccgatggaccaggtagggaagatgcggggccagccgtacggaggg
cctaacccctactcccagcatcagcagggcccttcctctgctccgggaccccaacaggga
ggctcctacccagcccagagctacggagctccgggtccccagaggtacccaatggggatg
cagagccgcacaccgggcaccatgggtggtatgcagtatgggcagcagatgtctgcgtat
ggacagcagggtccaggaggctacggccagcagaaccagggctactacagccagcatggc
ccaccgccccaccccggccagcagcagcctccatactctggccagacccagggcagctct
gctgctccctactctcagcagggtcacccttcgcaaccaccgggccagcacgcccagtct
gggcccccataccaacaatccccagggccccatggacctgctgcagggcagccttcctac
agccagcccccacagtcccattcaggacagccgccatacgtctctcctcagcagcagcag
caaactcaacagcagcagcaacaaggtcccggtccccagagtcagcaggggcctcagggc
caacctggttaccaacaagccaccggaccagggcagacaccccagcagcaaaccccgcca
cagcagcaaggaccaccgcagcaactaggaggtcctcccccccaagcccagcagccccca
ggtcacggccagcagagccaacagtcaccttactcccagacacccccactgcagcaacca
cctcagcaacagcagcaacaaccacagcagcaacagtctccatatcagaggttcccgcct
cctccacaggagctttcccaggattccttcagctcccagtccagtgctcctccttctaac
cagcccaccaagagcggtcaggaagacagcatgcagggccggccgtccagtctgccggat
ctgtccggctccatcgatgacctgcccaccggcaccgaggccgtcctgagtccgggcgtc
agcacctccggtgtgtccagcagtcagggagagcagagcaacccggcccagtcgcccttt
tccccgcacaccccgccccacctgccaggcatccgcggaccctcgccatcccccgtgggc
tccccggccagcgtgaccccgtcccgcagcggcccgctgtcccctgctgctgtgccaggt
aaccagatgccaccgcggccgcccagtgttcagtcggacagcatgatgcattcttccatg
aaccagtcacccatgggccccgacagagtgtacatgcgaaaccctcagatgcctccttat
gggtcccctggacagcctggctctgccttatccccacgccagtctacaggaggccagata
catagtggaatgggaccatatccccagaacagtactatgggaaactatgggcctcagggg
gcccagtacggcccacaaggctatcccaggcaaccgggctacacagggatgcccaacact
aactaccccagtgggcctggaatgggcggctccatgaaccccatgccggctcagggcagc
gggagtccgtacggaagcatgccacccggcaggataggcccggggcagatgggtactcgg
ccctacggtcctggtatgggccccaacatgggaagcatgcctcctcaggtggggtccggc
atgtgcccgcctccaggtatgaacaggaaggatggggggcccaccatgcaccatggccct
gcaaactccatacacaccaggccaccaggttatcctaacgtgaaccaaggtatgatggga
tcagcgcctccctatggcccaggcatgaacagcatgcacagtgtgatgaaccagggagca
ccgggaccttacccagtgggtggaaacatggccaacaacaaccccgggatggcacctggt
tctgagtttggcatggacaaaattaaccctgcccaaaagatcaacaacaaagtggatggg
actccaaaacctgaatccaaaaagaagtcgagctcttccaccatcaccaatgagaagatc
acccggctgtatgagctgggcccggagccagagaggaagatgtgggtggaccggtacctg
gcctttgccgaggagaaggccatggggatgagcaacctgcccgccgtgggccgcaagcct
ctcgacctcttccgcctctacgtgtccgtcaaagagatcggcggcctcacccaggtaaac
aagaacaagaagtggagggagctggccaccagtctgaacgtgggcacgtccagcagtgcg
gccagctcgctcaagaagcagtacattcagtgtctgtacgccttcgagtgtaagatcgag
cgcggcgaggacccgcccccggacttcttcaacacggacacaaagaagaaccaacccaag
atccagcctccaagcccagctggttcagggtcccttcaagggccccaaaccccccaatct
gccaccagttccatggcagaaggagacctgaagcctcccaccccagcctccaccccgcac
tcacagatgcctccgatgcctggtgtcaggagcagtgtgaatctgcaggatccgtttgct
gatggtggagacccagcgttttccagaaggaacaccatgactcccaactctcagggctac
cagccgggcatgggcggtccagagatgatgagtcgcatggctccctatgagtcgaacaaa
gacccattcgggggcatgagaaaagctggagaacagttcatgccccctaaccctaatagt
ggaatgggcgaacagtacaacagaggaccaccaggtcccatgggtaacatgccgatgggt
caaaggcagcagtatccttatggatatgaccgaaggcaggaaccaggcatgggccctgaa
ggcaacatgggacccgcagcgcctcagcccagtatgatgccttctggttctgatgcaggg
atgtactcacctagccgtcccccacctcagcaacggcatgattcctacacaaatcaatac
cctggccaaggggctccccctggtggcccttacccaaatcaacagccaggaatgtatgca
cagcagcaacctaactacaagcggcctgtagaagcggggtacggccctccagccaagcgc
cacgagggggaaatgtacaacgttccctacagtggtcagcagcagcctggaccccagtcc
tctgggcatcagggccagcaagacatctataaccagtacaacacatatccaggaggagag
cgcagaccaccaggcccacagggccagttccccttcccttttgggagagatagaggacct
tcatctgcagggccaaactcccagtctcacatgcctcctcagatgatgacaagctcgatg
ccttctggtcctgacggcccccagggccccgtatggcagggccgcaacgagatgggctat
cccaattatcccaaccgacagggacctcctgtaccaggccagggccccgggtaccacggt
atgaaccgttcaggagaggagatgatgccatcagaccaacgcattaaccatgaggggcag
tggcccggccacgtaaaccagaggcagcctccatttggacctgctagttctggaccacct
atgaccagacctttaccttcgacttaccagacttctcagaaccacattcctcaggtgtca
agcccagctcccatgtcccggtccatggaaaccaggacatcccccagcaagtctccctac
atgcaccctggcattaaggtgcagaaagccggccctccagttcccgcatcgcatatcggc
caggctcctgtgcagcaacccatgattcgacgagatgtggccttccctcccggctctgtg
gaagctacacagccccatcttaaacccagaaggcggctcaccatgaaagacataggcact
cctgaggcttggagagttatgatgtccctaaagtcagggttattggctgaaagcacctgg
gccttggacaccattaacattttactgtatgatgatggcagcattactacttttaatctt
tgccagctacctgggttcctggagctgatagtggagtacttcagacgctgcctcattgag
atatttggcatcctaaaggagtacgaagtgggagaccctggtcagcgcaccctgatagat
cccaacgcagctgaggactccgatgatgaaattcccatacctgagtgtgaagacatggac
accgatgaggaagaggatgaagatgaggagaatgaagagaaaaagaccaatcatgatgcc
tcctcacaggtgaaggttaaagaagaggaagaagaaagctcaatgaaagacaagtcctca
gaagacgatgatgaggaagagaaaagggagtcttctaccaaggaagctagtagctctacc
tcagggtcttctcaggaccccaacatccacttggaaaagccaaagcaggctagcaagttt
gataaactccctatcaaggtagtgcgtaagaagaaccccttccgcttaaaccacttatcc
aagcttgggcagcgacagagttttgacagtggcctgatacactggagtattggcggtggc
gacactactgaacacatccagacccacttcgaaagtcagatggatctccttaagcagcgg
aaacgcacgctacccgccactgaaggccgcaagaaggtcaagctgcttgggacgacggaa
aacccagagaaatctaagttctgtttggaagagaaggttcagcagcagcaggcccagtgt
tctgatcccaacaaggcctcaacagagaagagtccttcctctctttccctctgtgcacca
gtcactgccaccattgatgacgtactatcggcccgaccagggtcggtcacgatggaagtg
gtccgtggaggtgcagaggagcagaaagagaatggcaagtatctatttagcatcaaccct
gatcctcagagtcgacgcaacgtcaaaatcctggaagacgagccccacagcaaggacgaa
actcctctcagcactctgtcggactggcaggactcattggcccgccgctgcatctgtgtt
tccaacatcatcaggagcctctcctttgtccctggcaacgacctggaaatgtctaaacac
ccgggcctcctcctgcttttgggccgtctggtgctgctccaccacagacaccctgagcgc
aaacaggcaccagtcacctatgagaaggaggaggaagaagacgagggagtgagctgcgac
cgagacgagtggtggtgggactgcctcgaggtgttgagggagaactgcttggtcactctg
gccaacatctcaggccagctggacctttctatctacccagagagtatatgcttaccactg
ctggacggcctgctccattgggcggtgtgcccctcggcagaggccttggatcccttcccc
acactcggcccacacagctcactttcaccccagagactggtcctagagaccctcagcaag
ctcagcatccaggacaacaacgtcgacctcattttggccacgccaccgttcagccgcttg
gagaagctctacggctcgctcgtacgccttgtcggtgaacgcaaggtggccgtctgccgg
gaaatggcagtcgttttgctagctaacttagctcagggcgacagcttagcagcgcgggcc
atcgctgtccagaaaggcagcgtgggcaacctgctgggtttcctggaggacagtctagcc
gccacacagtaccaacagagccaaagctccttgcttcaaatgcagggcagtccccatttc
gagcctacaagcgtggacatgatgcggcgagcagcccgggcgctgcacgccttggccaaa
gtggaggagaaccactcagagttcactttgtacgagtcgcgcctactagacatctccgtg
tctccacttatgaaccctctggtgtcccaagtcatctgtgacgtactctttctgattggc
cagtcatga
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integrated database retrieval system
