Xiphophorus maculatus (southern platyfish): 102237085
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Entry
102237085 CDS
T02923
Symbol
lmo7
Name
(RefSeq) LIM domain only protein 7 isoform X1
KO
K06084
F-box protein 20
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
102237085 (lmo7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xma04121
]
102237085 (lmo7)
Ubiquitin system [BR:
xma04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
102237085 (lmo7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
102237085
NCBI-ProteinID:
XP_023193031
LinkDB
All DBs
Position
7:10537996..10599543
Genome browser
AA seq
1440 aa
AA seq
DB search
MMEWREQSSVSSEEAYLEAQRWIEAATKKKFGNGDFRSALENGVLLCDLINKIKPGTIKR
VNRLPTPIAGLDNLNVFLKACGKLGLKEAQLFHPGDLQDLSTRVTVKHQETNRRLKNVLI
TIYWLGRRAQSDRFYDGPYLNFKAFEGLLGTALYKALQESNSQKSSSVRDSGFGDSWYSE
REEIYSLRGGGGGGGGHRRDDSLDSLDSLGSRPHSISSDVTLKGSSEGCCSDTEADSIFR
MADNKNSLSYRRSLVITPKSSGQFNQFLPTKDKQSGYVPAPLRKKRAERNEDSRRSWASS
SFAEDEATLTRQQQTQESSDGSKSTSDIQVDPSIMRQNRFEELQKYREQIKESEDRWQDD
LSKWKNRRRSVNSDIVKKKEEREKIEQITYGSDGRSKSFKEVQEERETKKKNSIGSRLSS
LSYLDDDDDDLFEKPAIRAPIRSLPSRSYTIDVLSYSPEPSEPSPKAEEPPTAFPRTRRL
PSPPTPQETVDGPAARNSPTTTNQSPAAASYQKSPVEERDPIKYTEKTTRDVAPHSSFAS
TQKELEPRPSLLGAPIGVEAPSSSSLDRQAQLSSMEPKPPAVSRVSASLPRSYQRSDSAR
LTSVIAPRPFGTQPSRISSLSRAHTMDESHKGVNGNVDVSKKASVPSRYHQYMTSEDETQ
SSSAHSSDEEEEEEEEEKATAKGLSSTQSIRSLPSPVNSEVSVSPAPGRETSKEDFCEMR
ISLNQKPNSSRDFGFQAAWDSTGARVTSIQPGSSAEMCQLQVRDEVLTVNGLRVAQMSYE
QWKSSLEEALQKGSLVMDVRRHGQHNWDRDQPSLPFKSHKTINLTSTDHPTLLGPPETKT
ANSSLDFTSRTVTESVLAKEPPTLPLVDVASNRVNGDFQDQPVTMRNKESEPISLKNLKR
RSEFFEQGGSESAMPDIPVPAITPTSSSRWSWNPEEERKRQEKWQKEQELLLQEKYKRDQ
EKLQEEWLKAQQEIVTSVDHQVNSHGVSPHSPPSSLQQSTLWEEEERQRKVEQERQRQAE
ERRRREEEERELQRLQEERKRREMQAEEEREKREMELRMQRTREEELRKREEEQRRREEE
QRRTEEREKEQRQQEAAEQQRRQKAFEQQRWAAVSHDFDSAQPPLSFTDRTKSQSSPQLD
DDNKPQRRGLLRQTEDLSLRLLEEELRIARRKHLQSQKAAPELEWRNYLRYTEAERVVGS
TVPDGRSQQPQSQAELERQQILNEMKKKTALLTDNSWIRQRSASTAVNRDSDMPPVRRGE
SLDNLDSSYDSRRSSWTPRSSSFASNYSRPYSGYSGSSSFYTGASGPRRPVSSTLPPSFS
TGSLRGGAGTYSSPWSRPSPTPSTPSPITSPEPAPDAYQQRNRSVSGRKTCTFCDTPLGK
GAAMIIESLGLCYHLGCFKCIDCKSDLGGSEAGAEVRIRNKQLFCNTCYMRVKTGQPTSM
NT seq
4323 nt
NT seq
+upstream
nt +downstream
nt
atgatggagtggcgtgagcagtcctccgtcagcagtgaggaagcatacttggaggcgcaa
agatggatcgaggcagcaaccaagaaaaaatttgggaacggcgacttccgatcagccctg
gagaatggagttctgctgtgtgatctgataaacaagatcaagcctggcaccatcaaaagg
gtcaacaggctccctacacctattgctggactggacaaccttaacgtcttcctcaaggcc
tgtgggaagcttggactaaaggaggcgcagctctttcaccccggggatctgcaagactta
tccaccagagtgacagtaaagcatcaagagacaaacaggaggctgaaaaatgttttaatc
accatttactggctgggtagaagagctcagagtgatcgtttctatgatggaccttaccta
aatttcaaggcctttgagggattattaggcaccgcactatacaaggctctgcaggaatca
aacagtcagaagagctccagcgttcgagacagcggttttggagacagttggtactctgag
cgagaggagatctattcactgagaggaggtggaggcggaggaggtggacacaggagggac
gactcgttggacagtttggactcgctgggctcgagaccccacagcatctcatctgacgtc
actctcaaaggcagcagcgagggttgttgcagcgacaccgaggcagactccatcttcagg
atggctgacaacaagaacagcctcagctaccgcaggtcactagtcatcacacctaaatcc
agcggccagtttaaccagttcctgcccactaaagacaagcagtcgggctacgtgccggct
ccgctgaggaagaaacgggctgagcgcaacgaggacagccggcgtagctgggccagctcc
agctttgcagaagatgaagccacgctcaccagacagcagcaaacgcaagaaagttctgat
gggagcaaatcaacaagcgacatccaggtggacccctcaatcatgcggcagaatcgcttc
gaagagcttcagaagtaccgcgaacagattaaagagagtgaggataggtggcaagatgac
ctgagcaaatggaaaaaccggcgccggagcgtgaactctgatatagtgaagaagaaggag
gagcgggagaagatagagcagatcacgtacggcagcgacggcaggtccaagtccttcaag
gaggtccaagaggagagagagactaaaaaaaagaacagcatcggcagccgcctgtcatct
ctctcgtacttggacgacgacgacgacgacttatttgagaaacccgcaattcgcgcgccg
atccgatcgcttccatccagaagctacaccatcgacgttctctcgtattccccagagccc
tccgagccctctccgaaagccgaggagccccccactgctttcccacgcactcgcagactg
ccttcgcctcctactccgcaggaaaccgtggacggtcctgcagccagaaactcccccact
accaccaaccagtctccagcagctgcatcctatcagaagagtccagtggaggaacgcgac
cccataaaatacacagagaagactacaagggacgtagccccccactcctctttcgcctcc
acccagaaggagctcgagccaaggccctcattgttgggagcaccgattggggtggaggcc
ccctcttccagctctctggacagacaagcacagttgagctcgatggaacccaagcctccc
gccgtgtctcgggtttccgcctctctccccagaagctaccagagatcggatagcgcacgg
ctaacctcggtcatcgctccgaggccctttgggacccagccgtcccgcatctcctctctt
tccagagcccacacgatggacgaatcccacaagggtgtcaatggcaacgtcgatgtttct
aagaaggcgtcagtgccgagccggtatcaccagtacatgacctcagaggacgagactcag
tccagttctgcacacagcagcgatgaagaggaggaggaagaggaagaggagaaggccaca
gcgaagggcctgtcctcgactcagagcatcagatctctcccgtctcctgtcaacagtgaa
gtctcagtcagtcctgctcctggcagagaaaccagcaaggaggatttctgtgagatgcga
atcagcctgaaccagaaacccaacagcagccgagactttggcttccaggctgcctgggac
tcaacaggagctcgggtcacgtccatccaaccaggtagctcggccgagatgtgccagctg
caggtcagggacgaagtgctgacggtgaacgggctccgggtggcacaaatgagttacgag
cagtggaagtccagcttggaggaggccctgcagaagggcagcctggtcatggatgtgcgc
cgtcacggccagcacaactgggacagagatcaaccttccctgccatttaaaagccataag
accatcaatctgaccagtacggatcatccgacacttctaggtccccctgagacaaagacc
gccaactccagcctggatttcacttctcgtaccgtcacagaatcggtgctggctaaagag
ccccccactcttcctctggtggacgtggcttcaaacagagttaatggggacttccaagac
caaccagtgaccatgaggaacaaagaatcagaaccaatatctttgaaaaacttaaaacgg
agatcagagttttttgaacaaggaggatcggagtctgcgatgccagatattcctgttcct
gcaatcactccaacttcctccagccgctggtcgtggaacccagaagaagagcgcaagaga
caagagaaatggcagaaggaacaagagctcctcctacaggaaaaatacaagcgtgatcag
gagaagctgcaggaggagtggctcaaggctcagcaggagattgtcacaagcgtggaccac
caggtgaacagccacggcgtcagcccacactcgcccccatcttctctccaacagtccact
ctgtgggaagaggaggagaggcagaggaaggtggagcaggagcgccagcggcaggcggag
gagaggaggaggagggaagaggaggagcgggagctccagcgactccaggaggagaggaag
agaagagaaatgcaggcggaggaggagagggagaaaagggagatggaattgagaatgcaa
aggacgagagaggaggagctaagaaagagggaggaggagcagaggaggagagaggaggag
cagaggaggacagaggagcgggagaaggagcagaggcagcaggaggcggcggagcagcag
cgcaggcagaaagccttcgagcagcagagatgggccgctgtctcccacgactttgacagt
gctcagccaccactgtcctttactgacaggacaaaatcccagtcgtctccccagctggat
gatgacaacaaacctcagaggagaggcttgctacggcagacagaggacttgtctctcagg
ctgctggaagaggagttgaggattgcacgtagaaaacacctccaaagccagaaggctgca
ccagagctggaatggagaaactacctcagatacacagaggcagagagagtggtgggaagc
acagttcctgacgggaggagtcagcagccgcagtcgcaggccgagctggagcgccagcag
atcctgaatgagatgaagaagaagacggcgcttctgacggacaacagctggatccgacag
cgctccgccagcacggccgtcaacagggacagcgacatgccgcctgtgcgcagaggggaa
tctcttgacaacttggactcctcctatgactctcggcgttcatcctggactcccagaagc
agctcttttgcctcaaactactctcggccgtattctggctactctggcagctcttccttt
tacaccggcgcgtcggggccccgccggccagtctcctccaccctgcccccctccttctct
acgggctccctccgcggtggggcaggaacctactcgtccccttggtcccgtccgtccccc
accccttccactccgtcaccaatcacctctccagagcccgcacctgacgcctatcagcag
cggaacaggtcagtgagtggcaggaaaacctgcacgttctgtgacaccccgctgggaaag
ggagcagccatgatcatcgagtccctcgggctctgttatcatttgggctgtttcaagtgc
atcgactgcaagtccgacctcggaggctcggaggccggggccgaagtcagaatacgaaac
aagcaactcttctgtaacacctgctacatgcgagtcaaaactggccagccaacatccatg
tga
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