Xiphophorus maculatus (southern platyfish): 102237252
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Entry
102237252 CDS
T02923
Symbol
tnfrsf1a
Name
(RefSeq) tumor necrosis factor receptor superfamily member 1A
KO
K03158
tumor necrosis factor receptor superfamily member 1A
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04010
MAPK signaling pathway
xma04060
Cytokine-cytokine receptor interaction
xma04150
mTOR signaling pathway
xma04210
Apoptosis
xma04217
Necroptosis
xma04920
Adipocytokine signaling pathway
xma05132
Salmonella infection
xma05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102237252 (tnfrsf1a)
04150 mTOR signaling pathway
102237252 (tnfrsf1a)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
102237252 (tnfrsf1a)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
102237252 (tnfrsf1a)
04217 Necroptosis
102237252 (tnfrsf1a)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
102237252 (tnfrsf1a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
102237252 (tnfrsf1a)
09171 Infectious disease: bacterial
05132 Salmonella infection
102237252 (tnfrsf1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
xma04050
]
102237252 (tnfrsf1a)
04090 CD molecules [BR:
xma04090
]
102237252 (tnfrsf1a)
Cytokine receptors [BR:
xma04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
102237252 (tnfrsf1a)
CD molecules [BR:
xma04090
]
Proteins
102237252 (tnfrsf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Death
DUF4924
Motif
Other DBs
NCBI-GeneID:
102237252
NCBI-ProteinID:
XP_005798906
Ensembl:
ENSXMAG00000011413
LinkDB
All DBs
Position
3:1500648..1508614
Genome browser
AA seq
378 aa
AA seq
DB search
MEGIGNHGRRIFTFLLLMLMSSGVLTAEKQCESWYYETDGICCNKCHAGFKLVEKCTSNQ
ISRCTPCGDGEFSDQINFSSTCRRCKRCKESKNEEQVSPCQRDSNTKCQCKKGYYKHNID
SETYDCVECKKCGPNETLTHPCTRETDTVCDCKENYFREKGKCEPCSRCSLKCVQHCTTP
VQTKGPAHHHPQFMNMIIGFAVLVVLLVLGILITFIATKRSFNKKMLSLSSKSSVQQTEQ
SQDFLVSINEPSVETSLEDATETSFGEQELSKLPDCVPMITDFIYSVLDLVPLQQMKQLV
RSLGVTDTEIEQAEMDNRYCREAHYQMLRVWAQRAPRTVGGGKSETVHRQVLEELLSKLR
QLHLSRAAEELETKYAIQ
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggagggaataggaaaccatggaagacgtatcttcaccttcctgctcctaatgctaatg
agcagtggtgtgttgacggcagagaagcaatgtgaatcctggtactatgaaacggatgga
atatgttgcaataaatgccatgctggttttaaactggtagaaaaatgtactagcaatcaa
ataagtcgctgcacaccttgtggtgatggtgaattctcagaccagataaacttcagttct
acctgcagaagatgcaaaaggtgcaaagaatcaaagaatgaagaacaggtatcaccatgt
caaagagatagcaacactaagtgtcaatgcaaaaaaggctactataaacataacattgat
tcagaaacatacgactgcgtcgaatgtaaaaaatgtggacctaatgagaccttaacacac
ccatgtacacgtgaaacagacactgtgtgtgattgcaaggagaactatttcagagagaag
ggcaagtgtgagccctgcagccgttgttctctgaagtgcgtacaacactgtacaactcct
gttcagacaaaaggtcctgcccatcatcatccacagtttatgaatatgatcatcggattt
gcagttctggttgttttgctggttttggggattttaatcaccttcatagccacaaagcgg
tcattcaataaaaagatgctgagtctgtcctccaaatcatctgtccagcaaacggagcaa
agccaggatttcctggtgagtattaatgagccttcagtggaaaccagtctggaggacgct
accgaaacctcttttggtgagcaggagttatccaagctgcctgactgtgtcccgatgatc
accgacttcatctactcagtactggatctggttcccttgcagcagatgaagcagctggtt
cgctctctcggtgtaacggacacagagatcgagcaagcagagatggataacaggtactgc
cgggaggctcactaccagatgctgcgggtctgggcccagagggcgccgcggacagtcgga
gggggaaagagtgaaactgtacaccggcaggttttggaggagctcttaagcaaactgagg
cagcttcacctgagccgagcagccgaggaactggagacaaagtatgccattcagtga
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