Xiphophorus maculatus (southern platyfish): 102237464
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Entry
102237464 CDS
T02923
Symbol
jmjd1c
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C isoform X1
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xma03036
]
102237464 (jmjd1c)
Chromosome and associated proteins [BR:
xma03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
102237464 (jmjd1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
C1_2
DUF3069
zf-C5HC2
Motif
Other DBs
NCBI-GeneID:
102237464
NCBI-ProteinID:
XP_023196381
Ensembl:
ENSXMAG00000014154
LinkDB
All DBs
Position
10:complement(24304291..24426965)
Genome browser
AA seq
2838 aa
AA seq
DB search
MAVEARPELVGKRFLCVSGDEPPEIGDIVRLPWRSGVIRAVSNRDSTYSDLTVYVEFDDQ
EWEKREWVKVYEDFQLFLLEHQLVWAKRKEGAAGGAGAAGLLQGTKAKHVQWPALVFKPL
VGKNLLSSVTAVEFLLDRQRDFVSNQSACQPYQDEVDNQNPVLRDNPQLQEEVKGWLKNQ
KVQEIFMQGPYSLNGYRVRVYRQDSATQWFTGIITHHDLFSRNMVVMNDQVLEPQNVDPS
MVQMTFLDDVVHSLLKGENIGITSRRRSRSSQNNSAHMAGGRPVGTTGNSQSHYTRAQAN
SPRPIMMSSGPSPKSSQGPLAPQQQSQSQQTQQTVSQSYHSPGGSGREQREQRGGRSSRR
KGSDSSVPEEDKDRREETTGRESKAKVKQTANKRRKGEEDEKKAGLKRLKADMTSDLSES
SDSENPHKRITHSSCCSSSSSSSSSSSSSSSSSEPNSENELKPRSSDVIKSAISKMEDEE
KPVLKGPKMNDTSSFIRCLSPWVELRAAEDIKKSAVKDSGQILTNEEEELEAVTRITQSP
LQQASLIPDMVQSGAGENTKNTVKASSPSQTPSLSQLHGNNVIDITDDAQATVHQESSEA
VSALLASQKDESVALSPYLPLNPSPVSSPPVPTSPSPPEGCRRAEVDSLMKPPGVTGGSV
TLPKSLNGKVEFTPAEVMRPVSSIAETTPLVDKEKTVVSPHQLHHQQQQLHEQQHTQQMQ
QYTAVPHVVPLSLSEGSSKPPQQQPPLHKTPTPSPDLVKSKVSPSHTSSPVQKSQPPSSS
HNQSYPNPNPVEPLKAKPHPGLLDISKPKANTTPEVSKHKVLRYPDSSPSPSARLPIKVD
LVEPQRSGFKPVGLRSEAGGVSASGSTKSPLIIDKNETFTVYRDPALVRSDSDNSVTPSN
SSNHVAAYLHPHLHPLHPPSPHSPCLTSASHSHGASHLLAPPHSSPLPHPHLLPPGMLPA
MHPPPGSLFAGHPRLDSPGGLSHLALPHPAATHQQQFLQGHGGAASLSLFPIIWPYPNGT
PPPYPPGLSLPPTAKWVHSENPITVNSEASLRRNTASPWLHQAAGSSTDGLGLLNHIPVR
PASADAHRPSAKISTHTNPSMSKTAMDVHKEDVEKKGFVDPVRNLIFAQIKPDQTDRSHT
PTGKDVHLHRLYLDPHSKARLTNTQEVLHAADRTIKYKEENRQILKESIEVAPFTAKILR
PSDPGLDRDRSKEPAFPVRIPALASSSPKTSHTHPHVIQPEKSSYYTTISNSVVNEPPRL
YPSKEQSSYYDKAVGLSVGAAVQSQGSQSLVSYSSKASLSKPPPLIKHQPEGGEGLAGKI
TEQLSQQATLIPHQHLTSMDRKDRHSPAASNTTSTSSPLSLVSNHHQHQQHQLRAMPSLY
RAPVYHPPTQLSLERKETAEREKDRERDKAGYGGRLSPPTLTPIQPVSLPTAGTKTSAEQ
QKPPTLVPELRDVKVHGIGAAITSVASAISGDVMTDGWRGRDLIQERGSVFCRDTDVLRG
KPQAAMASVIVRPATSVRYESPVGANKSGATVHREVSMSYPSRLPGECPRLREAAQEAGG
GRVIQVNSNMDNVSVPYKATSMQSYQGPVGVSNTNSMCRSPVVFSPAVDVQNKPPKSGYS
AEFGNLKPGVGGWLPSLSGEGVDSHSISPGLSLPLTNSAAAALLVQSNTSASSPITASNQ
PNLSSFVHLKKHKAALAAAQSKTNLPAGPASLPTGNTSSIVDPVEKTPSHSSTPPPCTSG
ISSGEISNTSCAPGSTTPGTSSPLPNGQSSGSTLLGSAQPSNYHKLKKAWLTRHSEEDKT
STTASSNTKAEKLLTTTTSMCNTTAMSDMIKPCTVNLSASTSSEVDMNKDIGSKGERNLE
GKNAGSTGGGGEEKKSSHLSRRAFKRSYDSGSESGGDDSDTSESKMEGRAKRQSKPTYKK
KQNDMAKRKGDHEKDDEDVKPNGIFRSAREKTKLKLASSNGIPRSVLKDWRKVKKLKQTG
ESFLQDDSCSEIGPNLQKCRECRVVRSKKGEEPAHSPVFCRFYYFRRLSFSKNGVIRMDG
FSTPDQFDEEALALWVPGPLEDSHLDQTTAKYILSYIGDKFCQMVMTENTAASWIKKDAK
LAWKRAVRGVREMCDACEATLFNIHWVCQKCGFVVCLDCYKAKERRSCKDKELYGWLKCV
KGQPHDHKHLMPTQIIPGKVLTELVTSIHSLRDKSNIPFKCPCSTKQNVLTKLPATNGVS
QVLQNVLNHSNKLSLVKAEPGSQQNPEDGGAKAETNGGHAGGSSPDSDHDSTPVTPPESQ
SPLHFLADLAEQKSREEKKENKQSVVPAKCVKEEKDGEGVLQQCKNPSLVANSTEQGSTL
RDLLTTTAGKLKLGSTDAGIAFAPVYSTAAQTGKDGRTMPNILDDIIASVVENKIPASRQ
SITTKLSTKQDHMIPSNNSNPAPVGTDDTKAQRKKSATVPTVVLEDSTNQYPDIPHSWLN
NRRLLWLKDHRNQNNWKLFRECWKQGQPVLVSGIHKRLNVNLWKADSFNQEFADHQGDLL
NCKDQVVSNSGIKEFWDGFEDITKRPKSKDGEAMVYRLKDWPSGEEFMALMPSRYDDLMK
NLPLPEYSDPEGSLNLASHLPSFFVRPDLGPRLCCAYGVAASQDQDFGTANLHVEVSDVV
SVLVYVGVAKGNGVLSKTGVLKRLEEEDLDEGVRRRLKDSSEIPGALWHIYLNRDMDKVR
EFLHKLCKEQGIDVCLDQDPIREQSWYLSRKQRQRLLDEHGVQGWTVVQFLGDSVLIPAG
AMHQVQNLHSCVQVINDFVSPEHVGRSFHLTQELRANKEEVNYEDKLQVKNILYHCVKEV
VSSLKRNNSDIDLKEENS
NT seq
8517 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcgaggctcggccggagctggtcggaaaacggttcctctgtgtcagcggggac
gagccacctgaaatcggcgatattgttcggttgccatggaggtccggggtaatacgagcc
gtcagcaaccgtgacagcacctattccgacctgacggtgtatgtggaatttgatgaccag
gagtgggagaagagggagtgggtgaaggtctatgaggatttccagctgtttctcctggag
caccagctggtctgggcaaagaggaaggagggagcagctggaggagccggagctgcaggc
cttctgcagggaaccaaggccaagcacgtccagtggcctgcactggtgtttaaaccattg
gttgggaagaacctgctgtcttcagtaacagcagtggagttcttgctggaccgtcagcgg
gactttgtgtctaaccagtcagcctgccaaccataccaggatgaggtggacaatcagaac
ccagtgttaagagacaaccctcaactccaagaagaagtgaaagggtggcttaaaaaccag
aaggtgcaggaaatttttatgcaaggaccctactccctcaatggctaccgtgtgcgtgtg
tacagacaagactcggccacccaatggttcactggaatcattacgcaccacgacctcttc
agtagaaatatggttgttatgaatgaccaggtgctagagcctcagaatgtggacccatcc
atggtgcagatgacctttctggatgatgtagttcactcgttgctaaaaggagaaaacatc
ggcatcacctctagacgaaggtcgcgatcgagccagaacaactctgctcatatggcagga
gggagacccgtcgggaccactggcaactctcagagtcattacacacgagcccaggccaac
agcccccgtcccattatgatgtcatccggacccagccctaagagctcccaggggcctctg
gcccctcagcagcagagtcagtcgcagcaaacgcagcagacggtcagccagtcgtaccac
tcacccggcggcagcgggcgagagcagagagagcagcgcggcggccgctcctccaggagg
aaaggctctgacagcagcgttcctgaggaggacaaggaccggagagaggaaaccactggg
agagaatctaaggccaaggtaaagcagactgcaaacaaacgcaggaaaggtgaagaagat
gagaagaaagcaggtctgaagagactgaaggctgacatgacttcagatctgtcagaaagc
agtgactcagaaaacccacacaagaggatcacccactcatcatgctgctcctcctcttca
tcatcctcgtcatcttcgtcctcctcctcctcttcctctgagcctaactctgagaatgag
ctaaagcctcgcagcagtgatgtgataaaaagtgccatttccaaaatggaagacgaggag
aagccagtgttaaagggacccaaaatgaacgatacctcgtctttcatcaggtgcttgtct
ccgtgggtggagctccgagcagctgaggacattaagaaaagtgcagtaaaagattcaggt
caaattctgacaaatgaagaggaggaattggaggcagtgactcggatcacccagtctcca
ctgcagcaagcgtctctcatacctgacatggtccaaagtggagctggggagaacaccaag
aacactgtaaaagcatcatctccatcccagactccatcactgtcccagctccatggcaac
aacgtgattgacattacagacgacgctcaggccaccgtacaccaggagagctcggaggcg
gtctcggcgctgctcgcctcccagaaagacgagtcggtggccctctccccgtacctcccc
ctcaacccctcccccgtctcctcacctcctgtacccacatccccgtccccaccggagggg
tgccgcagagcagaggtggactcactcatgaagccaccgggagttactggaggcagcgtt
acattgcccaaaagtttaaacggcaaagtggagtttaccccagctgaggtcatgagaccg
gtctcatccatagctgaaactacgcccctggtggacaaggagaaaactgttgtctctcct
catcagcttcatcatcagcaacagcaactgcatgagcaacaacacacacaacagatgcaa
caatatacagctgtcccccatgtagttccactttctctatctgagggttccagtaaacct
ccacagcagcaaccccccctacacaagacccccaccccctccccggacttggtcaaatcc
aaagtgagccccagccacacatccagtcctgttcagaaatcccagccccccagcagctct
cacaaccagtcgtatcccaacccgaacccagtggagcctcttaaagctaaaccccaccca
ggcctcctagacatctccaaacccaaagcaaacactactcctgaggtcagtaagcataaa
gtcctgaggtaccctgactcctccccatccccaagcgctcgcttgcccatcaaggtggac
ttagtggaacctcaacgctctggtttcaagccagtggggttgcggtcagaggcgggtgga
gtcagtgcgagtggcagcacaaagagtccgctgatcatcgacaagaacgagaccttcact
gtttacagggacccagcattagttcgctcagactcagataactctgtcactccatctaac
tcctccaaccatgtggcagcctatctgcatccccacctgcaccccttgcaccccccctct
ccacactccccttgcctaacatctgcatcccattcccatggtgcctctcatctcctcgct
cctcctcactcttcacccctccctcatccacacctcctgccccctggaatgctcccagct
atgcatcctcccccaggctctctgtttgcaggacaccctcggctggactccccaggcggt
ctcagccaccttgcccttcctcacccagcagccacacatcagcagcagttcttgcagggt
catggtggagcagcaagtcttagtttgttccccatcatatggccttaccctaatggaacg
ccacctccgtaccccccaggactcagcctcccaccaactgctaaatgggtgcactctgaa
aatcccatcactgtgaattctgaggcgtctttaaggaggaacactgccagtccatggctg
catcaggctgctggtagttccactgatggtctcggtttactgaaccacattccagtcagg
ccagccagcgctgacgctcaccgcccctctgctaagatcagcacgcataccaacccatca
atgtcaaagactgccatggatgttcataaagaagatgtggagaaaaagggttttgtggat
cccgtcaggaatttaatctttgctcaaataaaaccagaccagacagacagaagtcatact
ccaacaggaaaagatgtccacctgcaccgcctttacctggatccacacagcaaagcccgc
ctgacaaatacacaggaagtacttcatgctgcagaccggaccattaaatacaaggaggag
aatcgtcaaatcctgaaggagagcattgaggttgcgcctttcactgctaagattctgcgg
ccctctgaccccgggttggacagggacaggagcaaagagccagcattccctgtccggata
ccagctcttgcctcttcaagtccaaaaaccagccacactcacccccacgtcatccagcca
gaaaaaagcagctactacaccacaatctcaaacagtgttgtgaatgagcctccaaggctg
tatccctccaaggagcaaagttcttactatgacaaagcagtggggctcagcgttggggcg
gctgtgcaaagccagggaagtcagtccttggttagttacagctccaaagcttctctctct
aagcctcctcctcttataaagcaccaaccagagggaggggagggtttagcagggaaaatt
actgagcagctcagccagcaggctactcttatccctcatcaacatttgacgagcatggac
aggaaggatcgccacagtcctgccgcctccaataccacctccacgtcgtcccccttgtcc
ttggtctccaaccatcatcagcatcagcaacaccagctcagggcaatgccatctctgtac
cgagctcctgtctaccatccacccacacagctgtctttggagcgcaaagagacggcagag
cgagagaaggacagagagagggacaaagcgggctatggtggacgtctgtcacccccgacc
ctcacacccatccagccagttagcttaccaacagctggcaccaaaacatcagcagagcag
cagaagcctcccacgttggtgccagaactcagggatgttaaagtccatggaatcggtgct
gccatcacctcagtggcctccgctatcagtggggatgttatgacagatggatggcgtggt
agagatctgattcaagaaagaggaagtgtgttctgtagagacacagatgtgctgaggggt
aagcctcaagcagcaatggcctccgtcattgtacgtccagctacgtcagttaggtatgaa
agtccagttggtgctaacaaatctggtgctacggtgcatagggaggtttctatgtcctac
ccttcgaggctcccaggggaatgtccacgtctgagggaggctgctcaagaagctggagga
ggcagagttattcaagtcaactcaaacatggacaacgtttctgttccgtataaagccacc
tccatgcaaagctatcagggacctgtaggtgtcagcaatacaaactctatgtgcaggtcc
cctgttgtgttctcaccagctgttgatgttcagaataaaccaccaaagtcaggatattca
gctgagtttggaaaccttaaacctggtgttggaggctggctgcccagcctctcaggagaa
ggtgttgactcgcactccatatcaccaggactgtctttgcctctgactaattcggcagca
gcagccctacttgttcaaagcaacacctcagcttctagtcccattactgcctctaaccag
cctaacttgtcctcttttgtacatctcaaaaagcacaaggctgccttggctgcagcccag
tctaagaccaacctccctgctggtcctgcatcattgcccactggaaacacttcatcaatt
gtggatccagttgaaaagacacccagtcacagctccacccctccaccttgtactagcgga
atctcctcaggtgagattagtaacaccagctgtgcacctggtagcacaacaccaggcacg
tccagtccgttacctaatggccagtcctccggatcgaccttgctgggttcagcacagccc
agtaactaccacaagctgaagaaagcctggttaacgcgacactctgaggaggacaagact
tctacgacggcctcctctaacacgaaagcagagaagctgctcaccaccacaaccagcatg
tgcaacactacagccatgtcagatatgatcaagccctgtacggtcaatctcagtgcctcc
acgtccagtgaggtggacatgaacaaagacattggaagcaaaggtgaacgaaacctggag
gggaagaatgctggatcaacaggtggaggtggagaggaaaagaaatccagtcatctctca
aggcgagcgttcaaacgttcttatgactctggatcagaaagtggcggagacgactctgac
accagtgaaagcaagatggagggcagagcaaagcgccagtctaaaccaacctataagaag
aagcagaatgacatggccaaaaggaaaggagaccatgagaaggacgatgaggatgtgaag
cccaacggcatctttcgatcagctcgtgagaaaaccaagcttaaactggcaagcagcaat
ggcatccctcgttctgtgctgaaagactggaggaaagtgaagaagctcaaacagacaggg
gagtcctttctgcaggatgactcgtgttcagaaattggacctaacctccagaagtgtcga
gagtgccgggtcgtccgcagtaaaaagggggaggagccagcacattcccccgtcttctgc
cggttctactatttcagacggctttccttcagcaaaaatggagtcattcgaatggatggc
ttctccaccccagaccagtttgacgaagaggctctggccttatgggtccctgggcccctg
gaggacagccacttggaccagaccactgccaagtacatcctcagttacataggagataag
ttctgtcagatggtgatgactgaaaacactgcagcgagctggatcaagaaggatgcgaag
ctagcatggaagcgggccgtgagaggggttagagagatgtgtgacgcttgtgaagcaaca
ctctttaacatccactgggtctgccagaaatgtggctttgtggtctgcctcgactgttac
aaagccaaggagagaaggagttgcaaagataaagagctgtatggctggttgaagtgtgtt
aaaggtcaacctcatgaccataagcatctcatgccaacacagatcatccctggcaaagtg
ttaacagagctggtgacctccattcactccctgagagacaaaagcaacatcccgtttaaa
tgtccgtgttccaccaaacagaacgtcctcaccaagctcccagcaaccaatggagtgtca
caggtcctgcagaacgtgctgaaccacagtaacaagctgtctctggtgaaggctgagcct
ggctcccagcagaacccagaggacggaggagccaaggcagaaaccaacggaggacatgcg
gggggcagcagtcctgacagtgaccatgacagtacacctgtcaccccacctgagtctcag
tccccacttcacttcctggctgaccttgcagagcagaaatccagggaggaaaagaaagaa
aacaagcagtcagtggtgccagctaaatgtgtgaaagaggagaaagacggggagggggtc
ttgcagcagtgtaaaaacccatctctggtggctaacagcacagagcagggctccacgctc
agagacctgctcaccaccactgcaggaaagctcaagctgggttctactgatgcaggaatt
gcctttgcacctgtttactctactgctgcacagactggaaaggatggccggaccatgcca
aacatcctggatgacatcattgcttcagtggtagagaataaaatccctgccagccgccag
agcatcaccaccaagctgtcaaccaagcaggatcacatgatccctagcaacaacagcaac
cccgcccccgttggtacagatgacaccaaagcacaaaggaagaagtcagccactgtgcct
acagtggtgctggaggattccaccaatcagtacccagacattcctcactcgtggctaaac
aacaggcggctgctgtggctcaaagatcaccgcaatcagaacaactggaagctgttcaga
gagtgctggaaacaaggacagcctgttttggtgtcggggatccataagcgactgaatgtc
aacttgtggaaggccgactcctttaaccaggagtttgcagaccaccagggagacctcctc
aactgcaaagaccaggtggtgtccaactctggaataaaggagttctgggatggatttgaa
gacattaccaagcgaccaaaatccaaagatggtgaagccatggtctaccgactgaaggac
tggccgtctggggaggagttcatggctctgatgccatcaaggtatgacgacctgatgaag
aaccttcctttgccagagtattcggatccagaagggagcctcaacctcgcctcacacctg
ccatctttttttgtcaggcctgacctcgggccaagactatgttgtgcatatggtgtagct
gcgtctcaggatcaagactttggaactgccaaccttcatgttgaagtatcagatgtggtt
tctgtcctggtttatgtcggagtggcgaaagggaacggagtcctatccaaaactggagtg
ttgaaacgtcttgaggaggaagatttagacgagggcgttcgaaggcggctgaaggactcc
agtgagatacctggagcgctgtggcacatctacctcaacagagacatggacaaagtccgg
gaatttctacacaagctgtgtaaggagcaaggtatagatgtgtgtctggaccaggaccca
atcagagagcagagctggtacctgagcaggaagcagcgccagcgactcctggatgagcac
ggagttcaaggctggactgttgttcagttcctgggagactcggtcctcatccctgcaggg
gccatgcaccaggtccagaatcttcacagctgtgtccaagtcatcaatgactttgtgtct
cctgagcatgtgggcaggtccttccacctgacccaggagctgcgtgccaacaaagaggag
gtcaactatgaggataagctgcaggtgaagaacatcttgtaccactgtgtgaaggaggtg
gtgagctcactgaagaggaataactctgacatagatctgaaggaagagaattcatga
DBGET
integrated database retrieval system
