Xiphophorus maculatus (southern platyfish): 102237581
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Entry
102237581 CDS
T02923
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C-like isoform X2
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04020
Calcium signaling pathway
xma04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
102237581
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
102237581
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xma04040
]
102237581
Ion channels [BR:
xma04040
]
Ligand-gated channels
Glutamate (ionotropic)
102237581
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
NMDAR2_C
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
102237581
NCBI-ProteinID:
XP_014327093
Ensembl:
ENSXMAG00000017142
LinkDB
All DBs
Position
10:12639252..12701241
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AA seq
1385 aa
AA seq
DB search
MAIPRRPPPPHSPWPPVFLLVLLLPPLQARPLLVHSSINVAVVFSGSSYQSEVRGRLSGE
NFVDLPVVVSPVTVLVNDTNPRDLLTHLCDTMATEKLHGVVFEDDVGSGADAQVAEVAQI
LDFLSTQTALPIVGISGGSAVVIPYKAEGSSFLQMGASLEQQVICMFKILEEYDWAEFAV
ITSLMPGYDTFVDIVQSYTDTSYFLWNLQDIMSLEMSVGANDLKTKRMLQQLDSQVLLAY
CSHEEAQYLFRLAGELGLLGPGYIWILPSLAVGNPNSPPPATFPVGVIGVITDQWRKSLR
QRVREGVAIVAKGAESFKKVYGFIPEGHGDCSKPAKQSENNTLFRHMLNVTWEQKDLSFN
NQGFLSNPSMVIITLDRERLWDKVGTFARGILQVRYPIWPRYGSFLEHISDDRHLTVATL
EEHPFVMVENVDPGTGTCVRNTVPCRRQSNHTDSVQSESYTKLCCKGFCIDILKKLSKTI
KFSFDLYLVTNGKHGKLVHGIWNGMIGEVFYRRADMAIGSLTINEERSEIIDFSVPFVET
GISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFVFEYFSPVGYNRSLVSA
KAPGGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVIFLASYTANLAA
FMIQEQYIDTVSGLSDKKFQKPQEHYPPFRFGTVPNGSTERNIRSNYPDMHTHMMKYNQK
GVEEALESLKTGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALEKDSRW
KRPIDLALLQFLGDGDTERLETVWLSGICQNEKNEVMSSKLDIDNMAGVFYMLLVAMGLS
LLVFAWEHLLYWKLRHSLHKSHKLDFLLAISRGIYSCFRGVEDPGRSSGLAKPDLTSNYA
QANMLKMLRTAKDLVSTANVESSLDNATKTIEQLTRHGSSMPVRVPQVTTEAVPGGFAYV
AENHCSIPQGSLTPPLTGITSLKQHRGVSRPTPLRYTLPTRSTSCLYDRPLPVSSLSTPH
LPVGEMLPHQHPHHYQTTGRVYVDSHSHSPYITYSELQLPDIYTSHPVSLPQNQHIQLGL
SQPKRRSKSFQCENGEVERRKHGDQGKCDKSTISLTELKANHLQENHISAPSVDNVYSGE
GMCPRVENYSSWPPEDLVLRGRRRHRRPSFLKATWGNDQIHHLDESQSSLSSQSPSTLPD
LFPCIVTPTTSAKPYNPAHVRNNLCLPRNQAYLHIREDQRRPNGRKGQRLRYSQSTHLPT
YGEAVRNGNGLGRGMVRRATSLLSRQYAHYLNSYPGLPIYHSPLDLQHHSQSSSPVCQLL
ACGGGRCGGQRTLLYQDNVYGAYGAYQGPQPGSEAQIGQGGTGQPVGSPCVLRSWRRVSS
LESEV
NT seq
4158 nt
NT seq
+upstream
nt +downstream
nt
atggccatacccaggagacctcctcctcctcactctccttggcctccagtgttcctgctt
gtcctgctcttgcccccactgcaggctcggccactgcttgtccactcgtccattaacgtg
gcggtagtgttcagtggctccagctatcagagcgaggtcaggggtcgccttagcggggag
aacttcgtcgatctgccagtggtagttagccctgtgaccgtgctcgtcaacgacaccaac
ccccgggacctgctaacacatctctgcgacacgatggcaacggagaagctgcatggggtg
gtgtttgaggatgatgtgggctcaggtgcagatgctcaggtagcagaagtggcacaaatc
ttggacttcctctccacacagacagctctgccaattgtgggcatcagtggtggctctgca
gttgttattccatacaaggctgaaggatcctcctttctacagatgggagcttctttggag
cagcaggtcatctgcatgttcaagatcttggaggagtatgactgggcagagtttgctgta
atcaccagcttgatgccgggctacgacacctttgtggatatagttcagtcctacacagac
acatcctactttctctggaatctgcaggacatcatgtctctggaaatgtcggttggtgcc
aatgatttgaagaccaaacgcatgctgcagcagttggactcccaggtcctgttggcgtac
tgctcccacgaggaagcgcagtacctttttcgtctagcaggcgagttgggtctgctgggg
cccggctacatctggatcctccccagccttgccgtaggcaaccccaacagccccccacct
gccaccttccctgtaggtgtgatcggtgtgatcacggaccagtggaggaaaagcttgcgg
cagagagtaagggagggtgtcgccattgtagccaaaggggcagagagttttaagaaggtt
tatggtttcattcctgaaggacatggagattgcagtaaaccagcaaaacagtcagagaac
aacaccctgttcaggcacatgctgaatgtaacgtgggaacaaaaagacctgtcattcaac
aatcagggctttctatccaacccttctatggtcatcattactttggaccgggagagactg
tgggacaaggtgggcacgtttgctcgcggcatccttcaggttcgctaccccatctggccg
cggtatggcagcttcctggagcacatatctgatgaccgccacctgacggtggccaccctc
gaggagcatccctttgtcatggtcgagaacgtggacccgggaaccggcacatgcgtccgc
aacactgtgccctgcaggcgtcagtccaatcacacagacagtgtccaatccgagtcctac
accaaactgtgctgcaaaggtttctgcatagatatcctcaagaagctatccaaaacaatc
aagttctccttcgatctctacctggtcaccaacggaaagcacggcaaactggtgcatggg
atttggaatgggatgattggagaggttttctacaggcgtgctgacatggccatcggctct
cttactatcaacgaggagcgctctgaaatcattgacttctctgtaccgtttgtggagacg
ggaataagtgtcatggtagcgcgtagcaatggcacggtatcgccgtctgcctttcttgag
ccctacagtccagcagtttgggtcatgatgtttgtgatgtgcctgaccgtcgtggctgtg
actgtgtttgtgtttgaatatttcagcccagtgggctacaaccgcagtctggtaagcgcc
aaagctccgggtgggccgacgttcacgatagggaaatcagtgtggctgctatggggaatc
gtcttcaacaactccgtccccattgaaaaccccaaaggaaccactagtaaaatcatggtc
ctggtctgggccttcttcgctgtcatcttcctggcttcttacaccgccaacctggctgct
ttcatgatccaggaacaatatattgacaccgtgtctggtctttctgacaagaagtttcaa
aaaccacaggagcattatcctccttttcgcttcgggacagttccaaatgggagcacagag
aggaacattcgcagcaactatcccgatatgcacacacacatgatgaaatataaccagaag
ggggtggaagaagctctagagagcctcaaaactgggaaactagatgccttcatctatgat
gctgctgtcttgaactacatggcgggtaaagatgagggttgcaaactggtaaccattggc
agtgggaaagtgtttgccaccacaggatatggcattgctttggaaaaagactcccgctgg
aaacgaccaattgacttggcattgctacagtttcttggagatggagacacagaacgcctg
gagacggtttggctttctggtatctgccagaacgagaaaaacgaggtgatgagcagcaag
ttggacattgataacatggctggtgtcttctacatgcttctggtagctatgggcctcagt
ctgctggtcttcgcctgggaacacctgctgtattggaagttgcggcactctctccacaag
tctcataaacttgacttcctgttggccataagcaggggtatttacagttgcttcagagga
gtagaagatccaggacgttcatctggtttggccaaacctgatctgacctccaactatgct
caagcaaacatgctaaaaatgcttcgcactgccaaggatctggtctccactgcgaatgtt
gagagctccctggacaatgctaccaagaccatagagcaattgactcgtcatggtagtagt
atgcctgttcgtgtccctcaagtcaccactgaggccgttccggggggatttgcttatgtt
gctgaaaatcactgctccattcctcaggggtccctcaccccacctctaactggtattacc
tctttgaaacaacacaggggtgtaagtagaccaacaccactgcgctacacacttccaact
cgttcaacatcgtgtctgtatgacagaccacttcctgtgtccagtttgagcactcctcac
ctgcctgtaggggagatgctccctcatcagcacccacaccactaccagactacagggagg
gtttatgtagactcccattctcactccccttacattacctactcagaactccagctacct
gacatttacacatctcatccagtctctttaccccaaaaccaacatattcagttgggcctt
tcacaaccaaaaaggaggtccaagagttttcagtgtgagaatggagaagtggaaaggaga
aaacatggggatcagggtaagtgtgacaaaagtactatcagtctgactgaacttaaagcc
aatcacctccaagagaatcatatctctgccccaagtgttgacaatgtttactcaggagag
gggatgtgtccccgggtggagaattatagctcttggcccccagaggaccttgtgctgagg
ggccggcggaggcaccgccgcccctcttttcttaaagcaacttggggcaatgaccaaatt
catcatcttgatgaatcacagtcttctttatccagccaatcaccttcaaccttgccggac
ctgtttccatgcattgttactcctacaacatctgccaagccttacaatcctgcccatgtt
cgaaataacctgtgcctcccaaggaaccaggcctacctccatataagggaggaccagagg
aggccaaatggacgaaagggccagagactgcgctactcccaatccacccacctcccaaca
tacggagaagcagttcgaaatggaaatggtttagggcggggtatggtccgcagagccaca
agcctgctcagccgacagtatgcacactatctgaactcataccccggtctccctatctat
cacagtccactggacctccagcatcacagccagagttccagcccagtgtgccagctgttg
gcctgtggtggtggacgatgtgggggacagcggacactgctgtatcaagacaatgtgtat
ggagcttatggggcctatcagggaccccagcctggctcagaagcccagatagggcaagga
ggaacaggacagcctgttgggagtccttgtgtacttcggtcttggcgacgagtttccagt
ctagaatctgaagtctga
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integrated database retrieval system
