Xiphophorus maculatus (southern platyfish): 102238048
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Entry
102238048 CDS
T02923
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C-like
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04020
Calcium signaling pathway
xma04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
102238048
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
102238048
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xma04040
]
102238048
Ion channels [BR:
xma04040
]
Ligand-gated channels
Glutamate (ionotropic)
102238048
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
NMDAR2_C
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
102238048
NCBI-ProteinID:
XP_005803245
Ensembl:
ENSXMAG00000012966
UniProt:
M4AEV1
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All DBs
Position
16:complement(1897216..1949729)
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AA seq
1411 aa
AA seq
DB search
MGLRLGSWSDSLWWPPPLPLLLLLFCTTPSSLGRPFGFPVPSVNVAVVFSGPAYQTEIKG
RLSRENFMDLPLEVNPITVLVNNTNPRALLTRICDTLSTNRVHGVVFEDNVGSEAVAQIL
DFISTQTAVPIVGISGGSAVVLPYKGEGSNFLQLGSSIEQQINGMFKVMEEYNWDSFVVI
TSLYPGYEAYVDYIKSFTDTSYFMWELQDVLSFDMSADSTNDIRARRLLQQIDAQVLLVY
CSHEEAQYLFSLATEVGLIGPGYIWIIPSMAVGNPDIPPPDSFPVGLISIITDRWRMSLR
KRVRDGVAIVVKGVQSFRKQRGFIPEGHSDCHNPVKQSAINDTLFRHMLNVTWEHNDFSF
NSNGYLVNPAMIVITLDRERQWDKVGTYEMGILQMRYPVWPRFGSYLEPVSDYRHLTVAT
LEERPFVIVEAVDPVTGTCVSNTVPCRRQSNKTEAIVGHTEPYTKLCCKGFCIDILKKLS
RTIKFSYDLYLVTNGKHGKLVRGIWNGMIGEVFYKRADMAIGSLTINEERSEIIDFSVPF
VETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFVFEYCSPVGYNRSL
VSAKDPGGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVIFLASYTAN
LAAFMIQEQYIDTVSGLSDKKFQKPQEQYPPFRFGTVPNGSTERNIRSNYPEMHSHMVKY
NQKGVEDALNSLKTGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKD
SRWKRPIDLALLQFLADGDTQKLQTVWLTGICRNEKKEVMSSKLDIDNMAGVFYMLLVAM
GLSLLVFAWEHLLYWKLRHSVRKSDRLDFLLAISRGIYSCFNGVEQSDRNGSLQSPDVTT
NYTQANMLKMLRTAKDMVSSARVENSLDSATKTIENWSRRGADNVRAGLPPRVTTTDVTH
GRLPYISSITDNHSPYPQRAITPTFPVHYGDTSTQPLLEKPRVVTRPTPLRYTLPTRSSQ
HLLERTLPISSLSSPHIAMRDPTPSGTSNPHHSSRLYVENQGRHPASPFVSYREFQVPDI
YVEHKGPLRRKFSYPPDCVSRRRRSFSYLFNNPEPRVRVDYDEPRSCFAELRANHLQAPD
GMAMACTPGHYPASSTSCNSCMKSYLEPEMDDIPLLGKDKLNRRASFLKATWGNDRIHQV
DETKPSTSTAPSTRTDMPDLFPQVVGPNPKPHKLYGSLGHNLSCYPLAAEPAYLDPAHMG
SYPYKQKIKYADSTRLPSYREAILQNAAALRRSSSTVVHRHYSTYLNSYTDLPVYVGPLP
QGPSQFYNSSKNMCHLFPCTSHCPENTAMLPRMTDRPVVYHNNMFGPYDGPKREDLGSGS
RDRRQVLVARRVNSPYVPKPWGRVSSLESEV
NT seq
4236 nt
NT seq
+upstream
nt +downstream
nt
atgggccttcgtctgggcagttggagtgactccctgtggtggccgccaccgctgccgctg
ttgctgctgctgttctgcacaaccccctcctctttgggtcggcccttcgggttccccgtg
ccctccgtgaacgtagcggtggtgttcagcggcccggcctaccagacggagataaagggc
cgtttgagccgggaaaacttcatggacctgccgctggaggtgaaccccatcactgtgctg
gtcaacaacactaacccacgcgctctgctcacccggatctgcgacaccctgtcaactaac
cgggtccacggcgtggtgtttgaggacaatgttggctctgaggctgtggcacagattctg
gacttcatctccacacagacagctgtgcccattgtgggtatcagcggtggctctgcagtg
gtcctgccatacaagggtgaaggttccaacttcctccaactgggttcctccatcgagcag
cagattaacggcatgttcaaggtgatggaggagtacaactgggacagctttgtggtcata
accagcctgtacccgggttacgaagcctacgtggattatatcaagtccttcacagacacc
agctacttcatgtgggagctgcaagacgtgttgtccttcgacatgtcggctgacagcacc
aacgacatacgagcccggaggctgctgcagcagattgatgcccaggtcctgttggtctac
tgctcccacgaagaggcacagtaccttttttcattagcaaccgaagttggactaatagga
ccgggctacatctggattatccccagcatggccgtgggaaacccagacatcccgccacct
gacagcttcccagtggggttgattagcatcatcacagaccgctggaggatgagtctgagg
aagagggtgcgggatggggtagccattgtggttaaaggtgtccagagcttcaggaagcag
agaggcttcatccctgagggccacagcgactgtcacaaccccgtcaaacaatctgccatc
aacgacacgttgttcagacacatgttgaatgtaacatgggagcacaatgatttctccttc
aacagtaatggctacctggtgaacccagccatgatagtcatcactctggacagagagaga
cagtgggacaaggtggggacgtacgagatgggaatcctgcagatgagatacccggtgtgg
ccgcggtttggctcctacctagagccggtgtcagattacagacacctgactgtggctaca
ctggaggagcggccctttgttattgtggaggcagtggaccctgtgactggtacttgtgtt
agcaacactgtaccctgccgacgacagtccaacaagacagaggctattgtgggtcacact
gagccatacaccaagctgtgctgtaaaggtttctgcatagacattctgaagaaactctca
cgcaccatcaagttctcctacgacctttacctggtcaccaatggcaagcacggcaagctg
gtcagaggcatctggaacgggatgattggagaggtgttctacaaacgagcagacatggct
atcggctcactgaccataaacgaagagcgctcagagatcattgatttttcggtgccattt
gttgagacgggaataagtgtgatggtggctagaagtaacgggacagtctctccatcagct
ttcttagaaccatacagtccagcagtctgggtcatgatgttcgtcatgtgtctgacagtt
gtggccatcacagtattcgtctttgaatactgcagtccagttgggtataaccgcagcttg
gtcagtgccaaagatcccggaggtcccacattcactattggaaaatcagtttggctactg
tggggaatcgtcttcaacaattcggttcctattgagaatccaaagggcaccaccagtaag
atcatggttctggtctgggctttctttgctgtcatcttcctggcttcgtacacagccaat
ctggctgcctttatgatccaggagcaatacatcgacaccgtttccggactgagtgacaaa
aagtttcaaaagccacaggagcagtatcctccgttccgctttggtaccgtcccaaatggc
agcacagagcgcaacataaggagtaactaccccgagatgcactcccacatggtcaaatac
aaccaaaaaggagtagaggatgctctcaacagccttaaaacagggaaactggatgccttt
atttatgatgctgctgtgctgaattacatggctggcaaagatgaaggatgcaaactggta
accattggcagcgggaaagtgtttgctactactggttatggaattgcactgcagaaggat
tctcgctggaaacgccccatcgacctggccctgctgcagttcctggctgatggtgatacc
caaaagttgcaaaccgtctggctcacaggtatctgtcgtaacgaaaagaaagaagtcatg
agcagtaagctggacatcgacaacatggccggagttttttacatgctgcttgtcgccatg
ggcctaagcctactggtgtttgcctgggaacatctgctctactggaaacttcgccattca
gttcgcaaatcagaccgactggactttctcctggctatcagtagaggcatctacagctgc
tttaacggagtagagcaaagtgaccgcaatgggagcctgcagagtccagacgtcaccacc
aactacactcaagccaacatgcttaagatgctgaggacagccaaggacatggtgtcatct
gctagagttgagaactctcttgatagcgccaccaaaacaatagaaaactggagcagacgt
ggagccgacaatgtgcgagctggcctgcctcccagagttacaaccacagatgtgacccac
ggccggctaccctatatctccagtataacagacaatcattccccctaccctcagagggcc
attacaccaacgttcccagttcattacggggacacatccacccagccccttctagagaag
cccagggtggtaacccgacccactccacttcggtacacgctgcctacacgcagcagtcag
catctgttggagagaactttgcccatttccagcctcagcagcccacacatcgccatgaga
gatccaactccctctggaacgtccaatccccaccacagcagcaggctgtatgtggaaaac
cagggccggcacccagcatccccttttgtttcctacagggagttccaggtacccgacatt
tacgtggagcacaagggacccctccgcaggaagttcagctaccccccagactgtgtaagt
cggagacggaggtctttcagctatctgtttaataatccagagccaagagtgagagtcgac
tacgatgaaccacggtcttgctttgctgagttgagagccaatcacctccaggcccctgat
ggtatggccatggcctgcactccaggacactaccccgccagcagcaccagctgcaactcc
tgcatgaagtcttacctggagccagaaatggacgacatccccctcttaggaaaggacaag
ttaaatcgacgagcctcatttcttaaagccacgtggggcaacgatagaatccatcaggta
gatgaaacaaagccttccacatccacagctccctccacccgaacagacatgcctgatttg
tttccacaggtggtggggccgaatccaaagcctcacaagctgtacggcagtttggggcac
aacctgtcctgttatcccctggccgccgagccagcctacttagacccagcccatatgggt
tcttacccctacaagcaaaagataaagtacgctgactctacccggctgccctcttacagg
gaagctatcctgcagaacgccgctgcactgcgccgctcctcctctacggtggtgcacaga
cattattccacctacctgaactcgtacacagatttaccagtgtatgtggggcctctccca
caaggaccgtcccagttctacaacagctcaaagaacatgtgccacttgtttccgtgtacc
agccactgcccagaaaacacagcaatgctccctagaatgacggacagaccagtggtttac
cacaacaacatgtttgggccttatgatggcccaaagcgagaggacttgggttcagggagc
cgagatcggaggcaagtccttgtggcgcgaagagtcaacagtccctatgtgccaaagccc
tggggcagggtctccagtctggagtctgaggtctga
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