Xiphophorus maculatus (southern platyfish): 102238311
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Entry
102238311 CDS
T02923
Name
(RefSeq) probable nuclear hormone receptor HR38
KO
K04465
nuclear receptor subfamily 4 group A member 1
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102238311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xma03000
]
102238311
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
xma03310
]
102238311
Transcription factors [BR:
xma03000
]
Eukaryotic type
Zinc finger
Cys4 nerve growth factor IB-like
102238311
Nuclear receptors [BR:
xma03310
]
4. Nerve growth factor IB like
4A. Nerve growth factor IB like receptor
102238311
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
102238311
NCBI-ProteinID:
XP_005804327
Ensembl:
ENSXMAG00000003578
UniProt:
M3ZN02
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All DBs
Position
20:22024735..22031365
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AA seq
591 aa
AA seq
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MPCVQAQYASLPYDNFFSSEFLNPDLSAKLAMEISGQKDQLSSSSLPSINTLMGNGYIGE
FDAYSCKVTTSPPASAASYNHAAAAESPSPQMQNQAFKLDDLQVYGCYPGSFSLSCLEET
HSSCGSDYYGSPIYGTGSPPTPGFQTESAAVWDSPFSPFPPALPSSVEKATMAQQFSFFT
FSNAQEQHSPLGQHQDLPSCQEDGFFHLSQHQHVSPLHCPPLSLDHGRLGSPRALEEAMM
SQKTPSLGSSEGRCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYVCLTNKDCPVDK
RRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKTTVEALSTTPSVNIIASLI
RAHLDSDPGIEKLDYSKYQERSDSLKEKEDAGDIQQFYDLLTGALDVIRNWAQTIPGFMD
FCAEDQELLLESAFVELFILRVAYRSKPEKNKLIFCNGLVLHRQQCANSFGGWIDSIMDF
SQSLHRMNLDNSLFACLSAFVIITDRHGLKEPKRVEDFQSNLISCLREHMSGIGSEVTRT
QPNYLSRLLGKLPELRTLCTEGRQRIFYLKLEDLVPPPPIVEKIFMDTLPF
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgccctgtgtacaagcccagtatgcatctctgccctatgacaacttcttcagctctgag
ttcttaaatcctgacctcagtgccaaactggcgatggaaatctctggccaaaaggaccag
ctgtcatcatcctcactgcctagcatcaacaccttgatgggaaatggttacattggggag
tttgatgcttactcctgcaaggttaccacttcccctcctgcctctgcagcttcttacaac
catgctgctgcagccgaaagccctagcccacagatgcagaaccaagccttcaagctggat
gatcttcaagtgtatggctgctacccaggatccttttctctcagctgtcttgaagaaaca
cactcatcatgtggatctgattattatggaagccccatctatggcactggttctcctcca
acaccaggctttcagactgagtctgcagctgtctgggattcccctttcagccccttccct
ccagccctcccctcctctgttgagaaggccaccatggcgcagcagttttcattttttacc
ttcagcaatgcacaggagcagcactctcctttgggtcaacatcaggatctaccatcttgt
caagaagatggcttctttcatctctcacaacatcagcatgtctccccacttcactgtccc
cccctgtccctggaccatggacggctgggaagcccgagggcactggaggaggctatgatg
tctcagaaaacccccagccttggatccagtgagggtcgctgtgcagtgtgtggcgacaac
gcatcctgtcagcactatggagtccgaacctgtgagggatgcaaaggtttcttcaagcga
actgtgcagaaaaatgcaaagtatgtgtgcctcaccaataaagactgcccggtggataag
aggaggagaaaccgatgccagttctgccgtttccagaagtgtcttgctgtgggaatggtc
aaagaagttgttcgcacagacagcctcaaaggtcgcagaggtcgcctaccttctaaacct
aagaccacggttgaggctttgtcaacaactcccagtgtgaacatcatcgcttctctcatc
agggctcatttggactctgacccgggcatcgaaaagctcgactactccaagtaccaggag
aggtcagacagtctgaaagaaaaggaggacgccggtgacatccagcagttctacgacctg
ctgaccggtgccttggatgtaataagaaactgggctcaaaccatcccgggattcatggac
ttctgtgcagaggaccaggagcttcttcttgagtctgcctttgtggagctcttcattctt
cgtgttgcatacaggtcgaagccagagaagaacaagctgatcttctgcaacggcctggtc
ctccaccggcagcagtgcgccaacagttttggcggctggatcgactccatcatggatttt
tcacagagtcttcaccgcatgaacttagacaactctctgtttgcctgtctttcagcattt
gtcatcatcactgatcgccatggcctgaaggagcccaaaagagtagaggactttcagagc
aacctcatcagctgtttaagggaacacatgagtggaattggatcggaagtgacacggacg
caacccaactacctgtcccgtctgctaggcaagctcccagagctgaggactctgtgcact
gagggccggcagcgcatcttttacttgaaactggaagacttggttcctcctcctccgatt
gtggagaaaatctttatggatacacttcccttttaa
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