Xiphophorus maculatus (southern platyfish): 111606137
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Entry
111606137 CDS
T02923
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
111606137
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xma04121
]
111606137
Enzymes [BR:
xma01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111606137
Ubiquitin system [BR:
xma04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
111606137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
SPRY
zf-B_box
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_6
U-box
zf-RING_5
zf-RING_10
Prok-RING_4
BshC
zf-RING_11
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
111606137
NCBI-ProteinID:
XP_023181592
LinkDB
All DBs
Position
21:complement(24411672..24414619)
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AA seq
743 aa
AA seq
DB search
MQRQADQLAPPAAPCSLTQLSRQQQLRLLQVLFCCEAGRMAQRGISLDEDMLRCSICLDL
LKDPVTIPCGHNYCSECIKNHWKQQDQKAIYSCPQCREVFTPRPVVGKNTMLAELVEEIK
KVALRDAPCLHQYVGPGDVSCDFCTGRKMKATKSCLQCLASYCDLHLQPHYDSPAFKTHK
LVTASADIQENICSLHNKMKEIFCRSDQRTICFLCSMDEHKGHDTVSAAAERTEWQQELG
ARRQDIWQRVQDREEALKLLQKEGDIITGSASDTVENIQAMFKQLLQLLAQRSYDIQQLI
GSQQEAEMRQVEELQQRVQQEISELTRRDQELEKLAHTEDHVQFLRRYPSLISLGPSTNS
PINIRSPNYFNQITYAVTELIQKLQDTLRQEWTRIAMTTAALPQTPAHHGIPPSPQAILS
KVGSLELPPKIHPKPERPKDSAPAAPPPLTKSKTAPRPPRRLKSFDDKVLIPSAYSNIIP
TAQFHTSSMEFKMLKPTYPTHPTPGTHLQKGPKVSSPTYPTPDQSKGPLSDLTEGENTFT
SPLGYPSLDKFKVLPPAAPNHTPGEPKMRTEFLPYACRLHLDPNTANKMLVLSGQNMRVT
RGKKKQSYPNHPERFTDRFQVLSREGLTGRCYWEVEWSGIVSVAVAYKHIVRAGGTSGFG
DNKMSWALYCHNNKYIHDGRSLDLPGPPCSRIGVYLDHEAGVLSFYSISSTMALLHQVQA
VFTQPLHAGICVGSGSAELLQLL
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgcagcggcaggcggaccagctagctccgcctgccgctccgtgttcactgacgcagttg
agtcgacagcagcagctcagacttcttcaggttctgttctgctgtgaagcaggaagaatg
gctcagcgggggatttcactggacgaagacatgctgaggtgttctatatgtctggatcta
ctaaaggatccagtgaccattccctgtggacacaactactgctccgagtgcatcaaaaac
cactggaaacagcaggaccagaaggccatctacagctgccctcagtgcagggaagtcttc
acacccaggccagttgtgggaaaaaacaccatgttagcagagctggtggaggaaataaag
aaggtcgcactccgagatgctccttgtcttcatcagtacgttggacctggagatgtgagc
tgtgacttctgtactgggaggaagatgaaagccaccaagtcctgcctgcagtgtctggcc
tcctactgtgacctccacctccagcctcactacgactctccagcttttaagacccataag
ctggtcacagcctctgcagacatccaggagaacatctgctccctgcacaataaaatgaag
gagatcttctgccgcagcgaccagcgcaccatctgcttcctgtgctctatggacgagcac
aaaggtcatgacaccgtctccgctgcagcagagaggaccgagtggcagcaagagctcgga
gcgagacggcaggacatctggcagagagtccaggaccgagaggaggccctgaagctgctt
cagaaggagggcgacatcatcactggctctgccagcgacacggtggagaacatccaggca
atgttcaaacagctgctgcagctcctggcccagagaagctacgacatccaacagctgatc
ggatcccagcaggaagccgaaatgaggcaggttgaagagcttcagcagagagtccagcag
gaaatctctgagctgaccaggagagaccaggagctggagaagctggcacacaccgaggac
cacgtccagttcctacgaaggtacccctctctgatatcactgggcccatctacaaactca
cccatcaatattcggtctccaaactactttaatcagataacgtatgctgtcactgagcta
attcagaaactgcaggacaccctgaggcaggaatggaccaggatcgccatgaccacagca
gcccttccacagacaccagctcaccatgggatcccaccatcaccacaagccatactctcc
aaagtcggttccttggagttaccaccaaaaattcaccctaaaccagagaggcccaaggat
tcagcaccagcagctcctccacccctcaccaagtccaagactgcaccaaggccaccaaga
cgcctgaaatcatttgatgacaaggtcctcataccttcagcttactccaacattatacca
acggcacaatttcacacatcgtctatggagttcaagatgttaaaaccaacatacccaaca
catccaacaccaggaactcacctgcagaagggccccaaggtttcctcaccaacgtaccca
acaccagatcaatctaaaggtccgttatcggacctgacagagggcgagaacacatttaca
tcaccgctaggttacccatcactagataagttcaaggttttaccaccagcagcaccgaat
cacacaccaggagagcccaagatgagaacagagtttttaccgtatgcatgtcggctgcac
ttggatcccaacacggctaataaaatgttggttctgtctggacagaacatgagagtgaca
cgaggaaagaaaaagcagtcgtacccgaatcatccagagagattcacagaccggtttcag
gttctgagcagagaaggtctgactggacgctgttactgggaggtggagtggagcgggatc
gtctctgtggcagtggcatacaaacacatcgtcagagcaggaggaaccagtggatttgga
gataataagatgtcgtgggccttatattgtcacaataataaatacatccacgatggtaga
agccttgacctcccaggacctccgtgttctaggataggcgtgtatctggatcatgaagca
ggagttctgtccttctacagcatctcttcaaccatggctctcctgcaccaagtccaggct
gttttcacccaaccgctacacgctggaatctgtgttgggtctggatctgctgagttactt
cagctactgtag
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