Xiphophorus maculatus (southern platyfish): 111607154
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Entry
111607154 CDS
T02923
Name
(RefSeq) protocadherin alpha-C2-like
Organism
xma
Xiphophorus maculatus (southern platyfish)
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_3
Motif
Other DBs
NCBI-GeneID:
111607154
NCBI-ProteinID:
XP_023184841
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Position
23:complement(16992071..16995753)
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AA seq
796 aa
AA seq
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MAYWASVFVLAALWPGALSVTRYSIAEEMERGSVVANLAADLGLELGGLAQREVKLDIFT
NKKYLDFNKKTGELYIVERIDREYLCPAKPTSCFLKLDFIIETPLRIFNIELGITDINDN
APHFRRDRVELDVSESATPGERFSLPNAVDPDVGINTIKTYKLSTSDHFTIEIQTGSDGT
QYVDLVLTKSLDREEKAVHKLVLTAVDGGVPVRSGTANIIVRVQDTNDNPPQFDKQTYTI
NMAENTPIGTLVVNLNATDLDEGSNSEIVYAFTLYTSEKTQDVFTLDPNTGEITVKGTID
YEDMKFYEMHIEAKDKGAHPLLGQCKIVVHVTDMNDNFPEITVQSVKNTVPENVPVGTVI
ALVGISDRDTGDNGKINIFIHEAMPFILNKSSDRPTHYNLIVSEPLDREKVPEYDITLIA
RDTGTPPLSDNETITVHLLDVNDNAPQFPQSFYTIRVMENNAPGSLLSSLTAFDPDLHEN
QYLVYFIIEKEIANTSMSMLFSINPENGNLYALKTFDYEIEKEFLFHIEARDSGSPPLSS
NVTVHIIIVDQNDNAPVIVSPWRAHGSVVEEKIPRSTDKGSLVAKVIALDTDSVHNSRIT
YQFLQVTDASLFSLDQYNGEIRTMRMFSYKDSRHLRLVVVAKDNGEPALSATVTIKLLTV
ETDVKAYSDMTEMPLEYDIFSDINLYLVIGLASVSFLLLITILVTIVLKCQKPKHSKTAP
PSRNSVISERNSTIADSTLVSNDAYWYSLFLAETRKGKLVVRQPVPKGSRYIVSSIPRGT
GLSETSDSAASTLQTG
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggcatattgggcctctgtctttgtcttggccgcactatggcccggcgctttgtctgtg
acacggtactctattgccgaggagatggagaggggttccgttgtggctaatcttgctgcg
gatttgggacttgagctcggaggtttggcacaacgagaggtaaaactcgatatcttcaca
aacaaaaaatatctagactttaacaaaaagactggggagctttacatcgttgaaagaata
gacagagaatatctttgcccagcgaagccaacatcttgctttttaaagcttgatttcatc
atcgagaccccactgcgcatcttcaacattgagctcggaataacagacataaatgataac
gctccacattttcgaagggacagagtagagctagacgtttcagaatccgccacgccgggg
gagagattctcactgcccaatgctgtagatccagatgttggcataaatacgattaaaaca
tacaaacttagcaccagtgaccattttaccatagaaattcagactggcagtgacggaacg
cagtatgtagatttggtattaacgaaatcgttagacagagaggagaaagcggtgcataaa
ttagtcctgaccgctgtggacggaggtgtccctgtgcgttcaggtactgccaacattata
gtaagagtacaagacacaaacgataaccctcctcagtttgacaagcagacgtacacaata
aacatggcagaaaatactccgataggaactctggtcgttaatcttaacgctactgatctt
gacgaggggagtaattcagagattgtgtacgcattcactctttacacgtcggaaaaaacg
caagacgtcttcacgctggatcccaacacgggagagataacagttaaaggaaccatagat
tatgaagatatgaaattttatgagatgcacattgaagcaaaagataaaggagcacaccct
ctgctgggccagtgcaaaatagtggttcacgtgacagatatgaacgataatttccctgaa
attactgtgcagtctgtgaaaaacacagtacctgaaaatgtacctgtaggaactgttatt
gcgctggtaggtataagtgaccgagacacaggtgataacggaaaaataaacatcttcata
cacgaggccatgccgtttattcttaacaaatcatcagacagacccacacattataacctg
atagtgtctgagccattagatcgggaaaaggtacctgaatacgacataacactaattgct
agagatacaggaacgcctcccctatctgacaatgaaacaataaccgtgcacctgctggat
gttaatgataatgcgccacaatttccccagtcattttataccatacgagtaatggagaat
aacgcacctggctccttgctcagctcactcactgcatttgatcctgacctccatgaaaac
cagtatctagtttatttcatcatagagaaggagattgccaacacctccatgtctatgctg
ttctccatcaatccagagaacgggaatctttatgcactgaaaacttttgactatgagatt
gagaaggagtttcttttccacattgaggccagagactctggttctcctcctctcagcagt
aatgtgaccgtccacatcatcattgttgaccaaaatgacaacgctccagttattgtctct
ccttggcgcgctcatggctcagtggtggaggagaagatccccagatccactgataaagga
tccctggtggctaaagtgattgccttagacacagactctgtgcacaactctcggattacc
taccagtttctccaggtgactgatgcttccttgttcagcttggaccaatacaacggagag
atcaggactatgaggatgttcagttacaaagactcgcgccacctcagactggttgttgtt
gccaaggacaacggggagcctgctctctctgctacagtcaccatcaagctgctgacagtg
gagactgatgttaaggcctactctgacatgactgagatgcctctggaatatgacatcttt
tcagacatcaacctgtatctggtcatcggtctggcctcggtgtcatttctcctgctcatc
accatcctggtcaccatcgtgttgaagtgtcagaaacccaaacacagcaaaactgctcct
cccagcaggaacagtgtgatcagtgagaggaactccaccatcgcagactccactctggtc
tccaacgatgcctactggtacagtctgtttctagcagagaccaggaaaggaaagctggtg
gtcagacagcctgtgccaaagggctccagatacatcgtgtccagcatcccgagagggaca
ggactgtcagagactagtgactcagctgcttctactctgcagactggatag
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