Xenorhabdus nematophila ATCC 19061: XNC1_1059
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Entry
XNC1_1059 CDS
T01274
Symbol
ddlB
Name
(GenBank) D-alanine-D-alanine ligase B, affects cell division
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
xne
Xenorhabdus nematophila ATCC 19061
Pathway
xne00470
D-Amino acid metabolism
xne00550
Peptidoglycan biosynthesis
xne01100
Metabolic pathways
xne01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
xne00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
XNC1_1059 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
XNC1_1059 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
XNC1_1059 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
xne01011
]
XNC1_1059 (ddlB)
Enzymes [BR:
xne01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
XNC1_1059 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
xne01011
]
Precursor biosynthesis
Amino acid ligase
XNC1_1059 (ddlB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp
ATPgrasp_ST
ATPgrasp_Ter
Motif
Other DBs
NCBI-ProteinID:
CBJ89130
UniProt:
D3V8T2
LinkDB
All DBs
Position
936731..937651
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AA seq
306 aa
AA seq
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MVDKVAVLLGGTSAEREVSLQSGQAIVTGLKEAGINAYSVDTKDFDVTKLKEEGFSKVFI
ALHGRGGEDGTLQGLLEFLQLPYTGSGVMASAVSMDKLRTKQLWQGSKLPVSPYVAINSQ
KFEQVSDFQLQDYVQELGLPLMVKPNLEGSSVGMTKVNDYAELRGALALAFKYDTDVLVE
KWLFGPEYTVGFLGDEALPSIRIQAPDVFYDYDAKYISNETQYFCPSGLSVEKEQELVDI
ASEAYKALGCRGWGRVDIMDDGKGNFYLLEANTCPGMTSHSLVPLAARQAGFSFSQLVVR
ILELAD
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggttgataaagtcgcagttctgttgggcggaacttctgctgagcgtgaggtttcattg
caatcaggacaggcaattgtgactgggctgaaagaagcaggcattaatgcttactcagtc
gatacaaaagactttgatgtgactaaactcaaagaagaggggttcagtaaagttttcatt
gccttgcatggtcgtggtggtgaagacggtacgttgcaaggtttactggaatttttgcag
cttccttacacaggcagtggcgtaatggcatctgctgtgtcaatggataaattgcggaca
aaacagctatggcagggatcaaaactgcctgtttccccttatgttgcaattaattctcaa
aaatttgaacaagttagtgattttcaactccaagattatgttcaagaattaggtttaccg
ttaatggtcaagccaaatctggaaggttccagtgtcggtatgaccaaagtgaatgactat
gccgaattgcggggcgcattagcattagcatttaaatatgacactgatgtattagtcgag
aaatggctattcggccccgaatacacggtcggatttttgggcgatgaggcgcttccttct
atccgcattcaggcgcctgatgtgttttatgactacgatgcaaaatatatttccaatgaa
acgcaatatttttgtccaagtggtttgagtgtggaaaaagagcaggagttggtggatatc
gcatcagaagcctataaagcactgggatgcaggggctggggacgtgttgatatcatggat
gacggtaaaggtaacttctatttgttggaggccaatacctgtccgggcatgaccagtcat
agcttggttccgttagctgcgcgtcaggctggcttcagtttttctcaactcgttgtgaga
attttggaattggctgattga
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