Xenorhabdus nematophila ATCC 19061: XNC1_1409
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Entry
XNC1_1409 CDS
T01274
Symbol
sucA
Name
(GenBank) 2-oxoglutarate decarboxylase, component of the 2-oxoglutarate dehydrogenase complex, thiamin-binding
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
xne
Xenorhabdus nematophila ATCC 19061
Pathway
xne00020
Citrate cycle (TCA cycle)
xne00785
Lipoic acid metabolism
xne01100
Metabolic pathways
xne01110
Biosynthesis of secondary metabolites
xne01120
Microbial metabolism in diverse environments
xne01200
Carbon metabolism
xne01210
2-Oxocarboxylic acid metabolism
Module
xne_M00009
Citrate cycle (TCA cycle, Krebs cycle)
xne_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
xne00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
XNC1_1409 (sucA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
XNC1_1409 (sucA)
Enzymes [BR:
xne01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
XNC1_1409 (sucA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
PFOR_II
Motif
Other DBs
NCBI-ProteinID:
CBJ89472
UniProt:
D3VAN6
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All DBs
Position
1287316..1290123
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AA seq
935 aa
AA seq
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MQNGAMKDWLDSSFLAGANQSYIEQIYEDYITDPNSVDASWREIFQQLPDAGFGGEQLHS
QTRDYFRRLAKDATRYHTSVSDPAMDAKQVKVLQLINAFRFRGHQHANLDPLGLWKQEPV
ADLDPAFHNLTKADFEETFNVGSFAIGKETMKLADLYDALKRIYCGSIGAEYMHITNTEE
KRWIQQRLESVTVDSQFSAEEKRRFLKELTAAEGLERYLGAKFPGAKRFSLEGGDALIPM
LKELIRHAGKQDTREVVLGMAHRGRLNVLVNLLGKKPADLFDEFAGKHKEHLGTGDVKYH
QGFSSDFETEGGLVHLALAFNPSHLEIVSPVVIGSVRARRDRLDEGRSNMVLPVTIHGDA
AITGQGVVQETLNMSQARGYEVGGTVRIVVNNQVGFTTSNPKDARSTQYCTDIVKMVQAP
IFHVNTDDPEAVAFVTRLALDFRNTFKRDVMIDLVCYRRHGHNEADEPSATQPLMYQKIK
KQPTARKIYGDKLITEGLLAANDVTELVNLYRDALDHGECVVDEWRPMGLHSFTWEPYLD
HEWDEEYPHQVDMKRLQDLGKRISSVPAEVEMHSRVAKIYGDRAEMANGNKLFDWGGAET
LAYATLVDEGVPVRLSGEDAGRGTFFHRHAVIHNQTNASVYVPLANIHHGQGVFNVWDSV
LSEEAVLAFEYGYATTEPRALTIWEAQFGDFANVAQTVIDQFISSGEQKWGRMCGLVMLL
PHGYEGQGPEHSSARLERYLQLCAEQNMQVCVPSTPAQVYHMLRRQSLRGMRRPLIVMSP
KSLLRHPLAVSSLDELANGKFEPVIGEIDALDPKEVKRVVLCSGKVYYDLLEQRRKNEQT
NVAIVRIEQLYPFPRQHLQAQLEQYAHVHDFVWCQEEPLNQGAWYCSQHNFREAIPFGAS
LRYAGRPASASPAVGYTSVHQKQQQALVDDALNVE
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacggcgcaatgaaggactggctggactcaagctttctggctggtgcaaaccag
tcttacatagagcaaatctatgaagactatataaccgatcctaactctgttgatgcaagt
tggagagaaatattccaacaattaccggatgcaggatttggtggggaacaacttcactca
cagacacgcgattacttccgtcgtctggcaaaagatgccactcgttatcacacttcggtc
agcgatccagcaatggatgcaaaacaagtcaaagttttgcaacttatcaatgcattccgt
tttcgcggacatcaacatgcaaaccttgatccattgggattatggaaacaggaacctgtc
gcggatctcgatcctgctttccataatttaacaaaagcggattttgaagaaacatttaat
gtgggttcttttgccattggcaaagagacaatgaaattggctgatttgtatgatgccctg
aagcgcatttattgtggttcaattggtgctgaatatatgcatatcaccaatacagaagaa
aaacgttggattcaacaacgtttggaatctgtgacggtagattcacagttcagtgcggaa
gaaaagcgtcgtttcctgaaagaattaacggccgcagagggcttggagcgttatttgggt
gctaagttccctggggcgaaacgtttctcccttgaaggtggtgatgcacttatccctatg
ctgaaagagctgattcgccacgcaggtaaacaagatacccgtgaagttgtgctcggtatg
gcacaccgtggtcgcctcaacgttctggttaaccttttaggtaagaaacccgctgatctg
tttgatgagtttgcaggtaaacacaaagaacatcttggtaccggtgatgttaaataccat
caaggtttctcttctgatttcgaaacagaaggtggtttggtgcatttagcgctggctttt
aacccgtctcaccttgaaattgtcagcccggttgttatcggttcagtacgtgcccgtcgt
gatcgccttgatgaaggtcgcagcaacatggttctgcctgtcactatccacggtgatgcc
gcaatcacgggacaaggcgttgttcaggaaacactgaacatgtcccaggctcgtggttat
gaagtgggtggtacagtacgcattgtggttaacaaccaagttggctttacgacttccaat
cctaaagatgcacgttcaacacaatattgtactgatattgtgaagatggttcaggcaccg
attttccacgtaaatacagatgatccggaagcggtggcatttgttactcgtctggcactt
gatttccgtaacaccttcaaacgtgacgtcatgatcgacttggtttgttatcgtcgtcac
ggtcataacgaagctgatgagccgagtgcaacacagccattgatgtaccagaaaatcaaa
aaacaaccaacagcacgtaaaatctatggtgataagctgataacagaaggtttgctggct
gccaatgatgtgactgagctggtaaatctgtatcgtgatgcactggatcatggcgaatgt
gttgttgatgaatggcgtccgatgggcttgcactcattcacttgggagccgtacttagac
catgaatgggatgaagaatatccgcatcaggtggatatgaaacgtctgcaagatctcggt
aagcgcattagttccgttcctgctgaagttgaaatgcactcacgtgttgcaaaaatttat
ggcgaccgggcagaaatggccaacggcaataagctgtttgactggggcggagcggaaaca
ctggcgtacgcaacgctggttgatgaaggtgttcctgttcgtctttcgggtgaagatgcg
ggtcgtggtactttcttccaccgtcatgctgtgattcacaaccaaactaatgcttctgtt
tatgtaccattggcaaatattcaccatggtcagggcgtcttcaacgtatgggattctgta
ctttcagaagaagcagtactggcgtttgaatatggctatgcaacgacagagccccgtgcc
ttgacaatctgggaagcgcagtttggtgactttgccaacgtggctcagactgtgattgac
cagttcatcagctccggcgaacaaaaatggggccgtatgtgtggtctggttatgttgttg
ccacacggttatgaaggtcagggaccagagcactcgtctgctcgtttagagcgttatctg
caactgtgtgcagaacaaaacatgcaggtatgcgtaccatctactcctgctcaggtttat
cacatgctgcgtcgtcagtctctgcggggtatgcgccgtccgctcatcgttatgtcaccg
aaatcactgctgcgtcatccattggctgtatccagtctggatgaactggctaacggcaaa
ttcgagccggtgattggtgaaattgatgcgttagatccaaaagaggttaaacgcgttgta
ctttgttccggtaaagtttattacgatttgctggaacagcgtcgtaagaatgaacagacc
aatgtcgccattgtgcgtattgaacaactgtatccattcccacgtcagcatttgcaagct
caacttgagcaatatgcccatgttcatgacttcgtctggtgtcaggaagagccactgaac
caaggggcttggtattgcagtcaacacaatttccgtgaagcgatcccatttggggcttct
ttacgttatgcaggtcgtccagcatctgcttccccggctgtgggatatacgtctgttcac
cagaagcaacagcaagcactggttgatgacgcactgaacgttgaataa
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