Xanthomonas oryzae pv. oryzae KACC 10331: XOO2774
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Entry
XOO2774 CDS
T00235
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
xoo
Xanthomonas oryzae pv. oryzae KACC 10331
Pathway
xoo00250
Alanine, aspartate and glutamate metabolism
xoo00310
Lysine degradation
xoo00350
Tyrosine metabolism
xoo00650
Butanoate metabolism
xoo00760
Nicotinate and nicotinamide metabolism
xoo01100
Metabolic pathways
xoo01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
xoo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
XOO2774 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
XOO2774 (gabD)
00310 Lysine degradation
XOO2774 (gabD)
00350 Tyrosine metabolism
XOO2774 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
XOO2774 (gabD)
Enzymes [BR:
xoo01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
XOO2774 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
XOO2774 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
XOO2774 (gabD)
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Motif
Pfam:
Aldedh
LuxC
baeRF_family2
Motif
Other DBs
NCBI-ProteinID:
AAW76028
UniProt:
Q5GZ43
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Position
complement(2936574..2937974)
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AA seq
466 aa
AA seq
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MTSMAVLLLENAMSYDTVNPTSGQVEHTQQTMDAAAIEARLAASAKAFPAWAALPLGERG
ALLRRVGEELTKRRDDLQRIMTAEMGKLRREALAEVDKCAQACAYYAEHAAAYLAPRDIP
TEAQSSYVRYEPLGCVFAVMPWNFPLWQAFRFLAPSLMAGNVSLLKHASNVPRCADVMKE
VLDAAGIPPGVFDVLHIDNDQAADVVRDDRIAAVTLTGSERAGRSLAANAGDQLKKCVME
LGGSDAFVVLEDADLEHTVQSAVQSRFDNSGQTCIAAKRFIVVDAIADQFIERFVAAAAK
RVVGDPQQESTTLAPMARADLRDELHKQVQASVAKGAKVLLGGEPVAGSHAGYPATILDN
VAPGMPAYDEEFFGPVASIIRVADEAEAVRVANDTTFGLGGSVWTADAKRGERVAQQLQC
GAAFVNSVVKSDVRLPFGGIKRSGFGRELADHGIHEFMNIKTIYVA
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
gtgactagcatggccgtcctgctattggagaacgccatgtcctacgacaccgtcaacccg
actagtggccaggtcgagcacactcagcagaccatggatgccgccgccatcgaagcgcgt
ctggccgcatccgccaaggcatttccggcctgggccgcgttgccgctgggcgagcgtggc
gcgttgctgcgccgcgtcggcgaagagctgaccaagcgacgcgacgacctgcagcgcatc
atgaccgccgagatgggcaagctgcgccgcgaggcgctggccgaggtcgacaagtgcgca
caggcctgcgcgtattacgccgaacacgccgccgcgtatctggcgccgcgcgacattcct
accgaagcgcaatccagctacgtgcgctacgaaccgttgggctgcgtcttcgcggtgatg
ccgtggaattttccgttgtggcaagccttccgctttctggcccccagcctgatggccggc
aatgtgtcgttgctcaagcacgccagcaatgtgccgcgctgcgccgatgtcatgaaggag
gtactggacgccgccgggattccgccaggcgtgttcgatgtgctgcatatcgataacgac
caggccgccgatgtcgtgcgcgacgaccgtatcgccgcggtgacgttgaccggcagcgaa
cgcgccggccgctcgctggccgcaaacgcgggcgaccagctgaagaagtgcgtgatggaa
ctcggcggcagcgatgccttcgtggtgctggaagacgccgatctggagcacaccgtgcaa
tcggccgtgcagtcgcgcttcgacaacagcgggcagacctgcatcgccgccaagcgtttc
atcgtggtggatgcgattgccgaccagttcatcgaacgcttcgtcgccgcggcagccaag
cgcgtcgtcggcgacccgcagcaagagagcaccacactggcgccgatggcgcgtgccgac
ctgcgcgacgaactgcacaagcaggtgcaggccagcgtggcgaagggtgccaaggtcttg
ctgggcggcgaaccggtcgccggctcgcatgccggttatccggcgacgatcctcgacaat
gtcgcacctggcatgccggcatacgacgaagagttcttcggcccggtcgcctcgatcatt
cgggttgctgatgaagcagaagcggtgcgcgtggccaacgacaccaccttcggcctgggc
ggcagcgtgtggacggcagatgccaaacgcggcgagcgcgtggcgcagcagttgcagtgc
ggggcggcattcgtcaattcagtggtcaagagcgatgtgcgcttgcccttcggcggcatc
aagcgttccggcttcggccgcgagctggccgatcacggcatccacgaattcatgaacatc
aagacgatttatgtggcgtga
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