Xanthomonas oryzae pv. oryzae KACC 10331: XOO3824
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Entry
XOO3824 CDS
T00235
Symbol
ddlB
Name
(GenBank) D-alanine-D-alanine ligase B
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
xoo
Xanthomonas oryzae pv. oryzae KACC 10331
Pathway
xoo00470
D-Amino acid metabolism
xoo00550
Peptidoglycan biosynthesis
xoo01100
Metabolic pathways
xoo01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
xoo00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
XOO3824 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
XOO3824 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
XOO3824 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
xoo01011
]
XOO3824 (ddlB)
Enzymes [BR:
xoo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
XOO3824 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
xoo01011
]
Precursor biosynthesis
Amino acid ligase
XOO3824 (ddlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp_3
ATP-grasp
RimK
ATPgrasp_ST
Motif
Other DBs
NCBI-ProteinID:
AAW77078
UniProt:
Q5GW43
LinkDB
All DBs
Position
complement(4079156..4080112)
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AA seq
318 aa
AA seq
DB search
MSAVIANARTSDPAIFGRVAVLLGGTSSEREVSLNSGSNVLEALRARGVDAQPVDGIAAL
AKALVAQQFDRVFNVLHGHNGGGEDGIVQGLMEAFGVPYTGSDVLGSALSMDKIRTKQVW
LSLGLSTPRYARLAAGASAADIHVAAQQLGLPVIVKPANEGSSVGVSRVFDQAQLEDAVT
LAARYDGALLMEQLIEGDELTVAVLGDTALPSIRIVPKGQWYDYNAKYIAEDTQYLCPGL
EGEPEAQIRQLALDAFRAAGCRGWGRVDVMRDGSSGQLYLLEVNTAPGMTSHSLVPKAAR
QLGIDFEELVWRVLEKTL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcggtcatcgccaatgcccgcaccagcgatccggccatctttggccgcgtcgcc
gtgttgctcggcggcacttcgtccgagcgcgaggtgtccttgaactccggcagcaatgtg
ctggaagcgctgcgtgcgcgcggcgtcgatgcgcagccggtcgatggcattgcggcactg
gccaaggcgttggtcgcgcagcagtttgatcgcgtgttcaatgtgctgcacggccataac
ggcggcggcgaagacggcatcgtgcagggcctgatggaagctttcggcgtgccgtatacc
ggctcggatgtgcttggctcggcgttgagcatggacaagatccgtaccaaacaggtgtgg
ctgtcgctgggcctgtcgacaccgcgttacgcgcggttggctgctggcgccagcgccgcg
gacattcatgtcgcggcacaacagctcggtttaccggtcatcgtcaagccggccaatgaa
ggctcaagcgttggcgtcagccgcgtgttcgaccaggcacagctcgaagacgcagtgacc
ctggctgcccgctacgacggtgcgctgttgatggagcagttgatcgaaggcgacgaactg
accgttgcggtgctcggcgacaccgcgttgccgtccatccgcatcgtgcccaagggccag
tggtacgactacaacgccaagtacatcgccgaagacacgcagtatctgtgcccgggcctg
gaaggcgagcccgaagcgcagatccgccaacttgcgctcgatgcgttccgcgctgccggc
tgccgtggctggggccgcgtggacgtgatgcgcgatggcagcagcggccagctgtatctg
ctcgaagtgaacaccgctcccggcatgaccagccactcgctggtgcccaaggccgcccgc
cagctcggcatcgatttcgaagaactggtctggcgcgtgctggagaagacgctgtga
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