Xanthomonas oryzae pv. oryzae KACC 10331: XOO3997
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Entry
XOO3997 CDS
T00235
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
xoo
Xanthomonas oryzae pv. oryzae KACC 10331
Pathway
xoo00300
Lysine biosynthesis
xoo00470
D-Amino acid metabolism
xoo01100
Metabolic pathways
xoo01110
Biosynthesis of secondary metabolites
xoo01120
Microbial metabolism in diverse environments
xoo01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
xoo00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
XOO3997
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
XOO3997
Enzymes [BR:
xoo01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
XOO3997
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GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
AAW77251
UniProt:
Q5GVM2
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All DBs
Position
complement(4266552..4267592)
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AA seq
346 aa
AA seq
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MVRPLSCLPPVATRARWSCRRSRCRWKPSPCRSRWKSPRLRPSPRTAAPSPPPPQTSPLA
AAMSADGRSGRLRFTKMHGAGNDFVVLDLRDGTPPPDAALAAQLADRHFGVGCDQILTIE
APRSEGAVAAYGIWNSDGSAARQCGNGARCVAAWLVRDGIAQCERFIIDSPVTAHAVERL
EGGRYAVAMGMPQFDPPQIPLAGFAHARDEYALPVHGDTVRFGAVSMGNPHAVVEVGRVD
AAPVERVGTLLQQNAAFPDSVNVGFVQVVDPTHVRLRVFERGVGETLACGSGACAAAVVL
MQRCRVERDVQVSLPGGELRIRWPCDHEQVVMSGPAVFVFDGEWNG
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
ttggtgcgacctttgtcctgcttgccgcctgtggcaacaagggcccgctggtcatgccgc
agaagccggtgccggtggaagcccagcccgtgccgcagccggtggaagagtccacgcctg
cgcccgtccccgcggacagcagcaccaagcccgcccccaccacagaccagcccgctagca
gcggcaatgagcgctgacggtcgcagcgggcgtctgcgtttcaccaaaatgcacggcgcc
ggcaacgatttcgtggtactggacctgcgcgacggcacgccgccgccagatgcagcgctg
gcagcgcaattggccgaccgccacttcggggtgggttgcgatcagatcctgaccatcgaa
gcgccgcgcagcgaaggcgccgtggcggcctacggcatctggaattccgacggctcggca
gcgcgccaatgcggcaatggcgcgcgctgtgtcgccgcctggctggtgcgcgatggcatc
gcccagtgcgagcgtttcatcatcgatagccccgtcaccgcgcatgcagtcgagcgcctt
gaaggcggccgctacgcggtggcgatgggtatgccgcagttcgaccccccccagattccg
ctggctggattcgcgcatgcacgcgacgaatatgcgctgccggtgcacggcgataccgtg
cgctttggtgcggtgtcgatgggcaacccgcatgcggtggtcgaagtcggtcgcgtggat
gcggcaccggtcgaacgcgtcggtacgctgctgcagcaaaacgccgcgtttcccgattcg
gtcaatgtgggtttcgtgcaggtggtcgaccccacgcatgtgcgcttgcgcgtgttcgag
cgcggggtgggggaaacgctggcctgcggcagcggtgcctgtgcggccgcggtggtgctg
atgcagcgctgccgcgtcgagcgcgacgtgcaggtgtccttgccgggtggcgagctacgc
attcgttggccctgtgaccacgagcaagtggtcatgtccggcccggcggtgttcgtcttc
gatggagagtggaacggatga
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