Xanthomonas oryzae pv. oryzae KACC 10331: XOO4167
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Entry
XOO4167 CDS
T00235
Symbol
icd
Name
(GenBank) isocitrate dehydrogenase
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
xoo
Xanthomonas oryzae pv. oryzae KACC 10331
Pathway
xoo00020
Citrate cycle (TCA cycle)
xoo00480
Glutathione metabolism
xoo01100
Metabolic pathways
xoo01110
Biosynthesis of secondary metabolites
xoo01120
Microbial metabolism in diverse environments
xoo01200
Carbon metabolism
xoo01210
2-Oxocarboxylic acid metabolism
xoo01230
Biosynthesis of amino acids
Module
xoo_M00009
Citrate cycle (TCA cycle, Krebs cycle)
xoo_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
xoo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
XOO4167 (icd)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
XOO4167 (icd)
Enzymes [BR:
xoo01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
XOO4167 (icd)
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Motif
Pfam:
IDH
Motif
Other DBs
NCBI-ProteinID:
AAW77421
UniProt:
Q5GV52
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All DBs
Position
complement(4442650..4444914)
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AA seq
754 aa
AA seq
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MIPLPEVVQRTMPNTPKILYTLTDEAPYLATQSLLPIIDAYTDTAGIVVETRDISLAGRI
LALFPEYLSDTQKVADDLGELGELATTPEANIIKLPNISASVPQLKAAIKELQGQGYALP
AYPDEPKDAAEKDIKARYDKVKGSAVNPVLREGNSDRRAPLSVKNYARKHPHRMGKWSSD
SKSHVSHMESGDFFGSEQSTTLADAGTLKIEFVGADGSSTVLKDKVAVKAGEIVDAAVLS
KRALASFIDAQIADAKARDVLFSVHLKATMMKVSDPVLFGVVVGEFYKDTLSRHADALKS
VGFDPNNGIGDLYARIGTLPEDQQARIKADIQAEYAQRPGLAMVNSDKGITNLHVPSDVI
VDASMPAMIRDSGQMWNAQGTLQDTKAVIPDRCYADVYQAVIDDCKAHGAFDPSTMGSVP
NVGLMAQKAEEYGSHDKTFQMAAAGTVKVTDGNGKTVFKHAVEAGDLWRMCQVKDAPIQD
WVKLAVERARLSDTPAVFWLDQARAHDAQVIAKVEQYLKDHDTNGLDIRILPPVEATAFS
LERIRKGQDTISVTGNVLRDYLTDLFPIMELGTSAKMLSIVPLMAGGGLFETGAGGSAPK
HVQQFVEENCLRWDSLGEFLALAASLEHLGNRYDNPSATVLAKALDVANGQFLDNNKSPA
RKVGELDNRGSHFYLAMYWAQALAAQTEDTALQGRFAPLARALTENEATIVAELNGAQGK
PVDIGGYYHPDLAKVSEAMRPSKTFNDILATLKA
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
ttgatcccccttccagaggtcgttcagcgcaccatgcctaatacccccaagatcctctac
acgctcaccgacgaagcaccttacctggccacgcagtcgctgctgccgatcatcgatgcc
tacaccgacaccgccggcatcgtggtcgaaacgcgcgatatctcgctggccgggcgcatc
ctggcgctgtttcccgagtatttgagcgacacgcaaaaggttgccgacgatctgggcgaa
ctcggtgagctggctaccacgccggaagccaacatcatcaagctgcccaacatcagcgcc
tcggtgccgcagctcaaggctgcgatcaaggagctgcagggccagggctatgcgctgccg
gcgtatccggacgagcccaaggacgcagccgaaaaagacatcaaggcacgctacgacaag
gtcaagggcagtgcggtgaatccagtgctgcgcgaaggcaattccgatcgtcgcgcaccg
ctgtcggtgaagaactatgcgcgcaagcacccgcaccgcatgggcaagtggagcagcgat
tccaagtcgcacgtgtcgcacatggagtctggcgatttcttcggtagcgagcagtccacc
acgctggccgacgccggcacgctcaagatcgaattcgtcggtgccgacggcagcagcacc
gtgctgaaggacaaggtcgcggtcaaagccggtgaaatcgtcgatgccgcggtgttgagc
aagcgcgcgctggccagcttcatcgacgcgcagattgccgatgccaaggcccgcgacgtg
ctgttctcggtgcatctgaaagccaccatgatgaaggtctccgatccggtgctgttcggt
gtggtggtcggcgagttctataaggacacgctgagcaggcatgccgatgcgctcaagtcg
gtcggcttcgatcccaacaacggcatcggcgatttgtacgcacgcatcggcacgttgccg
gaagaccagcaggcacggatcaaggccgatatccaggccgaatacgcgcagcgccctggg
ctggcgatggtcaattcggacaagggcatcaccaatctgcatgtgcccagcgacgtgatc
gtcgatgcatccatgccggcgatgattcgcgactccggccagatgtggaacgcgcaaggc
acgttgcaggataccaaggcggtgattccggaccgttgctacgccgacgtgtatcaggca
gtgatcgacgactgcaaggcgcacggcgcgttcgatccgtccacaatgggctcggtgccc
aatgtgggcttgatggcgcagaaggccgaagaatacggctcacacgacaagacctttcag
atggccgctgccggcaccgtcaaggtcaccgatggcaatggcaagacggtgttcaagcat
gccgtggaagccggcgatctgtggcgcatgtgtcaggtcaaggacgcgccgatccaggac
tgggtcaagcttgccgtcgagcgcgcacgtctgagcgacaccccggccgtgttctggctg
gaccaggcacgcgcgcacgatgcgcaggtcattgccaaggtcgaacagtatctgaaggat
cacgacaccaatggcctggatatccgcatcctgccgccggtggaagcgacggccttctcg
ctggagcgcatccgcaagggccaggacaccatctcggttaccggcaatgtgctgcgcgat
tacctcaccgacctgttcccgatcatggagctgggcaccagcgccaagatgctttccatc
gtgccgctgatggcaggtggcggtctgttcgaaaccggtgccggtggttcggcgcccaaa
catgtgcagcagttcgtcgaagaaaactgcctgcgctgggattcgctgggggaattcctg
gccctggctgcctcgctggagcacctgggcaaccgttacgacaatccgtcggccacggtg
ctggccaaggcgctggatgtcgccaacggccagttcctggacaacaacaagtcgccggcg
cgcaaggtcggcgagctcgacaaccgcggcagtcatttctatctggcgatgtactgggcg
caagccctggccgcgcagaccgaagacactgcgctgcagggcaggttcgcgccgctggcc
agggccctgaccgagaacgaagccaccatcgtggccgagctcaacggcgcacagggcaag
ccggtggacatcggtggttactaccatcccgatctggccaaggtcagcgaagcgatgcgt
ccaagcaagaccttcaacgatatcctggccacgttgaaagcctga
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