Xanthomonas oryzae pv. oryzicola BLS256: XOC_2507
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Entry
XOC_2507 CDS
T01873
Name
(GenBank) RND superfamily protein
KO
K18296
multidrug efflux pump
Organism
xor
Xanthomonas oryzae pv. oryzicola BLS256
Module
xor_M00639
Multidrug resistance, efflux pump MexCD-OprJ
Brite
KEGG Orthology (KO) [BR:
xor00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xor02000
]
XOC_2507
01504 Antimicrobial resistance genes [BR:
xor01504
]
XOC_2507
Transporters [BR:
xor02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
XOC_2507
Antimicrobial resistance genes [BR:
xor01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexCD-OprJ [MD:
M00639
]
XOC_2507
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Enas
RRM_occluded
DUF4232
Motif
Other DBs
NCBI-ProteinID:
AEQ96626
UniProt:
G7TG71
LinkDB
All DBs
Position
complement(2540042..2543167)
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AA seq
1041 aa
AA seq
DB search
MSRFFIDRPNFAWVVAIFISLAGLLALRTLPVEKYPEVAPPQISIMATYPGASAQVVNDA
VTSVIEQELNGARDMLYYDSSSSNGSAQITITFQPGTDPSIAQVDVQNRIRQSESRLPAA
VTQLGLQVEQTTAGFLMLYSLVYKDATAAQDVVRLNDYAARVVNDEIRRVPGVGRVQFFG
AEAAMRVWVDIQALRGYGLSIVDVNNAIRAQNLQVAAGSLGERPGAQDQELTTTLVVRGL
MESPQDFGQIVLRAQANGAVVHLSDVAKLELGLENYQFDVQENGGPAAGAAVQLAPGGNA
VATVAAVRKRLQELSQSFPADIAYSVPFDSSTFVNVAIKKVLHTLLEAMALVFLVMFVFL
QNIRYTLIPAIVVPVCLLGTFAVMKLLGFSVNMMSMFAMVLAIGILVDDAIVVVENVERL
MADEGLSPRDASMKAMTQVGGAIVGITLVLTAVFLPLAFMSGSVGVIYRQFSAVLAVSIL
FSGFLALTMTPALCATCLAPIDGHQEKKGFFGWFDRHFNALTSRFDRLNHRLVHRAGRCM
LVYVVLLGVLGLAYVRLPEAFVPQEDEGYMIVDMQLPPGASYSRTRAAGQQVNDYLAARP
SMQDVTLVYGFSFSGSGANAAMAFPSLRDWSERGDSESAANEVAAANVALGRISDATIMA
VMPPPIEGLGNSGGFSLRVQDRGNLGRDALMQAVNQLLRAANQSPKLAYAMVEGLADAPQ
LRLEVDRGKAEALGVSFQSAMDVLSSAFGSTIVNDFVNRGRLQRVVVQGAAGDRATPQSL
DTLHVTSSTGRQVPLTAFTTQRWEQGPVQIARYNGYASVNLTGEAAPGISSGDALAEMER
LAAALPQGIGYAWSALSYQEKAAGTQAPMLLGLALLVVFLLLVALYESWAIPFSVMLIVP
IGAVGATAAVWVAGLSNDVYFKVGLITIIGLAAKNAILIVEFAKELHARGARVPEAAMQA
ARLRFRPIVMTSLAFILGVIPLVIARGAGAASQNALGTGVIGGMLAASTLGVVFTPIFFT
WVMSYVAARKSAGETPSEPSA
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgattctttatcgaccgccccaacttcgcgtgggtcgttgcgattttcatctcg
ctcgccggcttgctggccttgcgcaccttgccggtcgaaaaatatccggaagttgcgccg
ccgcagatcagcatcatggccacctatcccggcgcgtctgcacaggtcgtcaacgacgcc
gtgaccagcgtcatcgagcaggagctcaacggcgcgcgcgacatgctgtattacgactcc
agcagctccaatggcagcgcgcagatcaccatcacgttccagcccggcaccgatcccagc
atcgcccaggtggacgtgcagaatcgcattcgtcaatccgagtcgcgactgccggcggcg
gtgacgcaacttggcttgcaggtcgaacagaccactgccggcttcctgatgctgtattcg
ctggtctacaaggatgcgactgccgcgcaggatgtcgtgcgcttgaacgactacgcggcc
agggtggtcaacgacgagatccgccgtgttcccggcgtgggccgcgtgcaattcttcggc
gctgaggctgcgatgcgggtgtgggtggacatccaggcattgcgcggctatgggctgagc
attgtcgacgtcaataacgcgatccgtgcgcaaaacctgcaagtggccgcgggcagcctg
ggcgaacgcccaggcgcgcaagatcaggaattgaccacgaccctggtggtgcgtggcctg
atggaatcgccgcaggacttcggccagattgtcctgcgtgcgcaggccaatggcgcggtg
gtgcatctgtcggacgtggcgaagctggagcttgggctggagaactaccaattcgacgtg
caggaaaacggtggcccggccgcgggcgctgcggtgcagctggcaccgggcggcaacgcc
gttgccaccgtggcggcggtgcgcaagcgcttgcaagaactgtcgcagagctttccggca
gacatcgcctactcggtaccgttcgatagttcgaccttcgtcaacgtcgcgatcaagaaa
gtgctgcacaccttgctcgaagcgatggcattggtgttcctggtgatgttcgtcttcctg
cagaacatccgctacaccctgatcccggcaatcgtagtgccggtgtgcctgctgggcacg
ttcgcggtgatgaagctgctgggcttctcggtgaacatgatgagcatgttcgcgatggtg
ctggcgatcggcatcctggtggacgatgcgattgtggtggtagagaacgtcgagcgcctg
atggccgacgaaggcctgtcgccgcgcgatgcgtcgatgaaagcgatgacgcaggtgggt
ggtgcgatcgtcggcattaccctggtgctcactgcggtgtttttgccactggctttcatg
agcggctcggtgggcgtgatctaccgacagttctccgcagtgctcgccgtctcgatcctg
ttttccggtttcctggcgctgaccatgacaccagcgctgtgcgcgacgtgtcttgcgccc
atcgacggccaccaagagaagaagggcttttttggttggttcgatcgccacttcaatgca
ctgacctcgcgcttcgatcggttgaaccatcgcctggtgcatcgtgccgggcgctgcatg
ctggtgtacgttgtactgctcggtgtccttgggctggcatatgtgcgcctgccggaggcc
ttcgtaccgcaggaggacgagggctacatgatcgtggacatgcaattgccgcccggtgcc
agttacagccgtacgcgcgcggccgggcaacaggtcaacgattaccttgccgcgcggccg
agcatgcaggacgtgacgttggtttacggtttcagcttctcgggaagcggtgccaatgcg
gccatggccttcccgtcgctgagggattggagcgaacgcggcgacagcgaatcggcggcc
aacgaagtcgcagccgccaacgtcgcgctgggacgcatcagcgatgcgaccatcatggcc
gtgatgccgccaccgatcgaaggcctgggcaattccggcggcttctcgctgcgcgtgcag
gaccgcggcaatcttgggcgcgatgcgctgatgcaagcggtgaaccagttgctgcgtgcg
gccaatcagtcgcccaaactggcatacgcgatggtggaaggtctggccgatgcgccgcag
ctgcggctggaggtggaccgtggcaaagcggaagcgttgggagtgagcttccagagcgcg
atggacgtgttatccagcgcgttcggctcgacgatcgtcaacgatttcgtcaaccgcggc
cgcctgcagcgcgtggtggtgcagggcgctgcaggcgatcgcgccacgccgcaatcgctg
gacacgctgcatgtcaccagcagcaccggcaggcaggtaccgctgacggcgttcaccacg
cagcggtgggagcaggggccggtgcagattgcccgctacaacggctatgcatcggtcaac
ctcaccggcgaggctgcgcccggcatcagctccggcgacgccctggcggaaatggaacgc
ctggcggctgcgcttccccagggcatcggctacgcatggtcggcgctgtcgtatcaagaa
aaagccgctggcacacaggcgccgatgctgctcggtctggccttgctggtggtgttcctg
ctgttggtcgcgctgtacgaaagctgggcgattccgttttcggtgatgctgatcgtgccg
atcggcgcggtcggagcgaccgccgcggtgtgggtggccgggctttccaacgacgtttac
ttcaaggtcgggctgatcaccatcattggcctggccgccaagaacgcgatcctgatcgtg
gaattcgccaaggaattgcacgcgcggggcgcacgcgtgcccgaggccgcgatgcaagcg
gccaggctgcgcttccgcccgatcgtgatgacctcgctggccttcatcctcggtgtgatt
ccgctggtgatcgcacgtggtgcgggcgcagccagccagaacgcgttgggcaccggcgtg
atcggcgggatgctggcagccagtacgctcggcgtggtgttcaccccgatctttttcacc
tgggtgatgtcgtatgtcgctgcccgcaagagtgcaggggaaacaccgtccgagccgtct
gcatga
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