Xanthomonas oryzae pv. oryzae PXO86: AZ54_16235
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Entry
AZ54_16235 CDS
T03765
Name
(GenBank) type IV secretion protein Rhs
Organism
xoy
Xanthomonas oryzae pv. oryzae PXO86
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
XOO_2897-deam
DUF6531
RHS
Motif
Other DBs
NCBI-ProteinID:
AJQ83951
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Position
complement(3356623..3361317)
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AA seq
1564 aa
AA seq
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MSTAAKHFDPQLGIDIHMYAMPPFPLPTPHIGLVLDPFDYLPFLGATVTVNGVKRATAGT
GGLDIHIPLGMWTPQLSMPMGPQFDGEEIFMGSKTVTADGDPFSRLAAPVLDCNLAGLIP
PFRIKKLKKPFRSLWLPTGINVAIPTNVKVGGPLTISLMAMLFHAAFAGLGALRRSKLGA
RAAQAFKGLRQRVFKHMDSGFLKCKVLRAEPVDIRDGSVSVLHEDFAIPGRLPLTWTRRY
SSAQAEQAGVCGHGWQTPGDIRLEIEADGVVLFHDGRGVAVFPQLPDATTSQVREFVDGA
RLSRDGTDLLVRTKDDTRYRFVDLPAAGVAVLPRARSLPIVQVEDACGNHWRFERRDGHL
VRIVESGADGVQGRFIEVEARHGRIDRLQLHDPATGLTHPLVAYRYTDGDLVAAEDALGA
PRRFVYRQHRLLQHTDRVDLSFYYDYDRQWRVVHSWGDGGLYDYRFAYDDLLRETAVTDS
LGHVSLVKFDENRLPLCEIDPMDGVTVFAYDAVGRTVAVTDPEGLCTRFDYDERGNLRTL
TRPDGSTLRQTFDDDDRLIAVADPDGHAWQQRHDARGLLVEQTDPLGATAQYVYDDHGQL
RAHTNARGATTRLEYDRYGLLAALIDALGQRSHFAHDALGRLRSQYDPLGHASTYEYDAK
GRLVRLRSPGGGEVQCEYDAEDQLVRYVDEAGAQTRLQYVGIGQIGKRLQADGHTVEYRY
DSEEQLVAVINQRGERYELKRDALGRIVEEVDYWGQARRYDYDASGRLTATYDPLGQRIA
YATDPLGRIVRKTLADVRQPGQQLQEHFVYDRRGQLVELRNPHRSATRRFDALGQLLEEV
QDGFRVGYGYDAVGNRVLRETSAGNRIAFGYDLRDQVVSVAINDDAPLLIERDALGRATR
EQLSAQVERRFAYDGRSLLTAQAVLKDAVPLFETHYDYDRAGNLTHRRDSVQGVDEYRYD
AIGRLLQHTDPKGKIERFFNDPAGDRLATRVQQVQLRKVVGGDDEQQVQWTREGTYDGVH
YVFDRAGDLIRKGSPHGPAPDDLELCWDANHRLAESRKAGQTTYYGYDPLGRRVFKRNPT
HTTWFYWDGDALLGEVKHANDDPDAAPVWVGNVANLIEAKRRKEKLAKLHERVREYVYYP
GTFVPLALVEKELEDKGEKITIDFSNQSTVKHGANAADSSAPVGLLDELTTKPSTLPESG
EPRQLNHAALDLSKDSSISPLSTPKGMGKLGGITLKNTAVSVSDLQKMGKEIRAGADYAG
KKIEPSEATVYGMQLGFGNAGTAYREKALTSVRSESQIAGVADASSADFEVAVVLTSSKW
KGVIYHYHVDPNGCARRLTSSSGEVAWFASYQGWGALSDEYSVLENPLRFQGQYGDIETG
LNYNRYRYYDCELGQFVVNDPLRLSAGENLYRYAPNTLGWMDAMGLHSTQVPYGDTDLSR
IAQAYRIDNDIRGGRNVAVFEYESSDGSLVREVQASRGRHSERRIANKLDAMGVDASKVT
RIYTELAPCPSVRGMQYCEKMIGGKFANASVTHSFEYGATSASRRSGVKQLKAAVAKIFR
GCGG
NT seq
4695 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgccgccaaacatttcgatccgcagttgggcatcgacatccacatgtatgcg
atgccgccatttccgctgccgacgccgcatatcggcctggtactggatccgttcgactat
ctgccgttcctcggcgccacggtcaccgtcaacggggtcaaacgcgccactgcgggcacc
ggcgggctggatatccatattccgctgggcatgtggacgccgcagctgagcatgccgatg
gggccgcagttcgacggcgaagagatcttcatgggcagcaagaccgtcaccgccgatggc
gacccgttttcgcggcttgctgcgccggtcctggactgcaatctggccggcctgattccg
ccgttccgcatcaagaagctcaagaagccgttccggtcgctgtggctgccgaccggcatc
aacgtcgcgattcccaccaacgtcaaggtgggtggcccgctgacgatctcactgatggcg
atgctcttccacgcggccttcgccggcctgggagcgctgcgtcgctccaagctgggcgcg
cgcgcggcgcaggcgttcaagggcctgcggcagcgggtgttcaagcacatggattcgggg
ttcctcaagtgcaaggtgctgcgcgccgagccggtggatatccgcgacggtagcgtgtcg
gtgctgcacgaagacttcgccattcccggccgcctgccgttgacctggacgcgccgttac
agctcggcgcaggccgagcaggcgggcgtctgcggtcacggttggcagacgcccggcgac
atccgcctggagatcgaggccgacggcgtggtgctgttccatgatggccgcggcgtggcg
gtgttcccgcagttgccggacgcgacgaccagccaggtgcgcgagttcgtcgatggcgcg
cggctgtcgcgcgacggcaccgacctgctggtccgcaccaaggacgacacgcgctaccgc
ttcgtcgatctgccggcggcgggcgttgcggtgttgccgcgtgcgcgcagtctgccgatc
gtgcaggtcgaagatgcctgcggcaatcactggcgcttcgagcgccgcgatggccacctg
gtgcgcatagtggagagcggcgcggacggcgtgcaaggccgcttcatcgaggtggaggcg
cggcatggacggatcgatcgattgcagttgcacgatccggcgaccggcttgacgcatccg
ctggtggcctatcgctacacggatggcgacctggtcgctgccgaggacgcgctcggcgca
ccgcgcaggttcgtctaccgccagcaccgcctgctgcagcacaccgaccgggtcgacctg
tcgttctattacgactacgaccggcagtggcgcgtggtgcatagctggggcgacggcggt
ttgtacgactaccgtttcgcctatgacgacctgctgcgcgagaccgcggtgaccgattcg
ctgggacatgtctcgttggtgaagttcgacgagaaccgcctgccgttgtgcgagatcgac
ccgatggacggcgtcaccgtgttcgcgtatgacgcggttggccgcaccgtggcggtcacc
gatccggaagggctgtgcacacgcttcgactatgacgagcgcggcaatctgcgcacgctc
acgcgcccggacggcagcacgctgcgccagaccttcgatgacgacgaccgcctgatcgcc
gtcgccgatccggatggccatgcctggcagcagcgccacgacgcgcgtggcttgctggtg
gagcagaccgatccactgggagcaacggcgcagtatgtctacgacgatcatggccagctg
cgcgcgcacaccaatgcgcgcggcgcgaccacgcgactggagtacgaccgctacggcctg
ctggccgcgttgatcgatgcgctggggcagcgcagccacttcgcgcacgatgcactgggc
cggctgcgcagccagtacgatccgctcggccatgccagcacgtacgagtacgacgccaag
ggaaggctggtgcggctgcgctcgcccggcggcggcgaggtgcagtgcgagtacgacgcc
gaagaccagcttgtccgttatgtggacgaagcgggcgcgcagacccggctgcagtacgtc
ggcatcggccagatcggcaagcgcctgcaggccgacgggcacacggtggagtatcgctac
gacagcgaggaacagctggtcgcggtgatcaaccagcgtggcgaacgctatgagctcaag
cgcgatgcgctgggccgcatcgtcgaggaagtggattactggggccaggcccgccgctac
gactacgatgcctccggtcgcctgaccgcgacatacgacccgctcggccagcgcatcgcc
tatgccaccgacccgctcggccggatcgtgcgcaagacgctggcggacgtgcgccagccg
ggccagcagctgcaggagcatttcgtctacgaccgccgcgggcaactggtcgaattgcgc
aacccgcatcgcagcgccacccgtcgtttcgacgcgttgggccagctgctggaagaagtg
caggacggcttccgggtcggctacggctacgacgcggtgggcaatcgcgtcttgcgcgag
acctcggccggcaatcgcatcgccttcggctatgacctgcgcgaccaggtggtgtcggtg
gcgatcaacgacgacgccccgctcctgatcgagcgcgacgcgcttgggcgcgccacccgc
gagcaactcagcgcgcaggtcgaacgccgtttcgcctacgacggccgcagcctgctcacc
gcccaggcggtgctcaaggacgcggtgccgctgttcgaaacccactacgactatgaccgc
gccggcaacctgacccaccgccgcgacagcgtgcaaggcgtggacgagtatcgctacgac
gccatcggacggctgctgcagcacactgacccgaagggcaagatcgaacgcttcttcaac
gacccggccggcgaccgcctggccacgcgcgtgcaacaggtgcaattgcgcaaggtggtc
ggcggcgacgacgaacagcaggtgcaatggacccgcgagggcacgtacgacggcgtgcac
tacgtcttcgaccgcgccggcgacctgattcgcaagggcagcccccacggccccgcaccc
gacgacctggaactgtgctgggacgccaaccaccgcctggccgaaagccgcaaagccggg
caaaccacctactacggctacgacccgctgggcagacgggtgttcaagcgcaacccgacc
cacaccacatggttttactgggacggcgacgccctgctgggcgaagtgaagcacgccaac
gacgacccggatgccgccccagtctgggtcggcaacgtcgcgaacctgatcgaagccaag
cgccgcaaggagaaactcgccaagttgcatgagcgggtgcgggagtatgtgtattacccc
gggacgtttgtgccgttggcgttggtggagaaggagcttgaagacaaaggcgagaaaatt
accattgatttttctaaccaatcaacagttaaacatggtgccaatgctgcagactcttca
gctccagttggcttgcttgatgagctaaccactaagccgtcgacattgcctgaaagcggc
gagccgcgtcagcttaatcatgcagctctcgacctgagcaaagattcatcaataagcccc
ctttcaacgcccaaaggcatggggaaattggggggtattacgttaaaaaatactgctgtt
tcggtatctgatttgcagaaaatgggcaaagagataagggcaggggctgactacgcgggt
aaaaaaatagagccatctgaagcaacggtttacgggatgcaacttgggttcggcaacgcg
ggtactgcctatcgtgaaaaggcgttgacttctgtaaggtcagagtcccagatagccgga
gttgctgatgcgtcatctgctgattttgaagtggctgtagttctcacttcttctaaatgg
aaaggggtgatctaccattatcatgttgatccaaatggttgtgctcgccgtctgacgtca
tcttctggtgaggtggcttggtttgcaagttatcaaggctggggggcattgtccgacgag
tattcggtacttgagaatccattgaggtttcaaggccagtatggcgatatagagacaggg
ttaaattacaatcgctatcgatactacgattgtgaattaggtcagtttgtggtgaatgac
cctcttcgcctaagtgcaggtgaaaacctctataggtacgctccaaataccctgggttgg
atggatgcgatgggcctgcattcgacacaggtgccgtatggcgatactgatttaagcagg
attgcgcaggcttatcggatcgataacgatataagaggaggcaggaacgtcgccgtattt
gaatatgaatcgagtgatgggagccttgtccgtgaggttcaggccagtagagggaggcat
tcggagcgaaggattgctaataaattagatgctatgggtgtcgatgcttcaaaggttaca
agaatctatacggaattggcgccttgtccatctgtaagaggcatgcaatactgtgaaaaa
atgataggtggaaaattcgccaacgcttcagtaacccatagctttgagtatggtgctact
agtgcttctcggcgatctggagtgaagcaattgaaggccgcggttgctaagatattcagg
ggttgtggaggttaa
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