Xanthomonas phaseoli: XppCFBP6546_07560
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Entry
XppCFBP6546_07560 CDS
T05156
Symbol
XppCFBP6546P_07560
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
xph
Xanthomonas phaseoli
Pathway
xph00300
Lysine biosynthesis
xph00550
Peptidoglycan biosynthesis
xph01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xph00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
XppCFBP6546_07560 (XppCFBP6546P_07560)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
XppCFBP6546_07560 (XppCFBP6546P_07560)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
xph01011
]
XppCFBP6546_07560 (XppCFBP6546P_07560)
Enzymes [BR:
xph01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
XppCFBP6546_07560 (XppCFBP6546P_07560)
Peptidoglycan biosynthesis and degradation proteins [BR:
xph01011
]
Precursor biosynthesis
Amino acid ligase
XppCFBP6546_07560 (XppCFBP6546P_07560)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
ATS29698
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All DBs
Position
975834..977309
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AA seq
491 aa
AA seq
DB search
MALSQLLPDVALTHDVQVSGLVMDSRAVRPGDAFVAIAGFGAHGLGFVEQARANGAAAVL
FEPPAPDGLPVPADAIAVPGLRARLGVMADQFHGRPSQAMRMVGVTGTNGKTSTVQLLAQ
ALTLLGTPTGTLGTLGVGLYGAAVPTGFTTPLVLPTHALLAQLRDEGAQAVAMEVSSHAL
DQGRVDAVHFDVAVFTNLTRDHLDYHGDMAQYGAAKAKLFTRAGLKAAVVNLDDTFGHTL
FAALDPALRAIGVSSRAHSDASVSAQALQLDHNGINFALNVQGQVHPVHSPLLGRFNVDN
LLAVAGALWAMEFAPAQIASVLGQLQPIHGRMNRLGGAYGAPLVVVDYAHTPDALEQALS
SLRSHAQDRLICVFGCGGERDTGKRPQMAAIAELKADVAIVTDDNPRGEDGDAIVADILR
GFARPDAAIVQRDRAAAIHQAIGMASPSDIVLIAGKGHEPYQEVAGVRHAFDDAIVAAQA
LLPRTVLGVRP
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggcgctttcgcagttattgccggacgtggcgttgacgcacgacgtgcaggtgtccggg
ttggtgatggatagccgtgccgtgcgtccgggcgacgccttcgtggcgatcgccggcttc
ggtgcgcatggtctgggctttgtcgaacaggcgcgcgccaatggcgcggcggcagtgttg
ttcgagccgccggcgcccgacggtctgccggtgccggccgatgcgattgccgtgcccggt
ttgcgcgcgcgccttggcgtgatggccgatcaatttcatggtcggccgtcgcaggcgatg
cgcatggtcggcgttaccggtaccaacggcaagacctccaccgtgcagctgctggcgcag
gcattgacgctgctcggtacgcccaccggcacgctcggtacgctgggcgtcggtctgtat
ggcgcggccgtgccgaccggcttcaccacgccgctggtgcttcccacgcatgccttgctg
gcgcaattgcgcgatgagggtgcgcaggccgtggcaatggaggtcagctcgcacgcgctc
gatcagggacgtgtggatgcggtgcacttcgacgtggcagtgttcaccaacctcacccgc
gaccatctcgattaccacggcgacatggcgcagtacggcgcggcgaaggccaagctgttc
acccgcgctggcttgaaagccgccgtggtgaacctggacgatacgttcggccacacgctg
ttcgctgcgctcgatcccgcgctgcgcgcgatcggtgtgagctcgcgcgcgcattctgat
gccagcgtgagcgcgcaggcactgcagctggaccacaacggcatcaactttgcgttgaat
gtccagggccaggtgcatccggtgcattcgccgctgctgggccgtttcaacgtggacaac
ctgctcgccgtggccggcgcgttgtgggcgatggagtttgcgcctgcgcagatcgccagc
gtgctcggccagttgcagcctatccatggccgcatgaaccgccttggcggcgcatatggc
gcgccgttggtggtggtcgattacgcacacacgcccgacgcgctggaacaggcattgagc
agcctgcgttcgcatgcgcaggaccgcctgatctgcgtgttcggctgcggtggcgaacgc
gacaccggcaagcgcccgcagatggcggcgattgccgagctcaaggccgacgtggcgatc
gtgaccgacgacaacccgcgtggcgaagacggcgatgcgatcgtggccgatatcctgcgt
ggcttcgcgcgaccggatgccgccatcgtgcagcgcgaccgcgccgctgcgatccatcag
gccatcggcatggccagcccatcggacatcgtattgatcgccggcaagggccatgagcca
tatcaggaagttgccggtgtgcggcatgccttcgacgacgccatcgtggcagcccaggcg
ctgctgccgcggaccgtcctgggagtgcgcccatga
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