Xanthomonas sacchari: SB85_06275
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Entry
SB85_06275 CDS
T03566
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
xsa
Xanthomonas sacchari
Brite
KEGG Orthology (KO) [BR:
xsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xsa03016
]
SB85_06275
Enzymes [BR:
xsa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
SB85_06275
Transfer RNA biogenesis [BR:
xsa03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
SB85_06275
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
AJC45420
LinkDB
All DBs
Position
complement(1534888..1535508)
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AA seq
206 aa
AA seq
DB search
MSPDAAPAGAQFSLGFDAPAARESLFFALLPDTRTAQAVHSLGQQLCQAHGLHGRALPPE
RLHVTLHYLGEYAGIPPRLLQQACAAGQALAASPFQLAFDQAVTFDSRARSRPLVLRGDA
EPAPLLALRQALQQQLARHGVAPRADGAYLPHMTLAYVDQALASQQVPALHWQATSLSLI
RSVQGQGRYLHEASWPLRAAPAQHGA
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgtctcccgatgctgcgcctgccggcgcccagttttcgctcggtttcgatgcgcctgcc
gcacgcgaaagcctgttctttgcactgctacccgacacgcgaaccgcgcaagcggtgcac
agccttggccagcaactgtgccaggcgcatggtctgcacgggcgtgcgctgccgcccgag
cggctgcacgtgaccttgcactatctgggcgaatacgccgggattccgccacgcttgctg
cagcaggcatgcgccgccgggcaggcgcttgcggcctcgccctttcaacttgcattcgac
caggcggtgactttcgacagccgcgcgcgtagccgaccgctggtactgcgcggtgatgcc
gagcccgcgccgttgctggcgttgcgtcaggcgctccagcagcagttggcccgacacggc
gtggcgccgcgcgccgacggcgcctatctgccgcacatgaccctggcctatgtcgatcag
gcgttggcgtcgcagcaggtgccggcgctgcattggcaggcgacgtcgctgagcctgatc
cgcagcgtacagggccagggccgttacctgcacgaagccagctggccgttgcgcgccgcc
cctgcgcagcacggcgcatga
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