Xanthomonas theicola: G4Q83_05735
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Entry
G4Q83_05735 CDS
T06965
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
xth
Xanthomonas theicola
Pathway
xth02020
Two-component system
xth02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
xth00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
G4Q83_05735
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
G4Q83_05735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xth03021
]
G4Q83_05735
Transcription machinery [BR:
xth03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
G4Q83_05735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_38
Sigma70_r4
HTH_IclR
HTH_23
HTH_Crp_2
Sigma70_r4_2
HTH_11
MarR_2
HTH_Tnp_ISL3
HTH_AsnC-type
MarR
HTH_36
Motif
Other DBs
NCBI-ProteinID:
QNH24354
LinkDB
All DBs
Position
complement(1272188..1273633)
Genome browser
AA seq
481 aa
AA seq
DB search
MKARLQTSLGQHLVMTPQLRQAIKLLQMSSAELEVEIAEAVESNPLLEWAEDAAPAPEVN
GAGSAEGEADAAPPAGDTLDNVPQRDGDDWSSEPAWSGGSGGSFDDDDDMGSAAERVAEP
DTLIDHLLWQLHLSHLSPRDRSIGAALIDALDDDGYLREPLATIAETLQPDIVADEEEIG
TVLHQIQRFDPVGIAARTLGECLNLQLDVLPADTPGLELARTIANGPLEKLPRSGIAGIA
HGLKRPAAAVETAVALLRSLDPRPGKQVGELGADTYVVPDCVVWRQRGVWHAALAGHARP
KVTIHRGYERLIRQCGESDAGYLRGQLQEARWLLKSLEARGETLLKVTRCLLRQQAGFLE
FGEQALRPLTLREIAGELGLHESTISRAIARKYVRTPRGTIPLRAFFASGIDTDGGGEAS
STAIQAMLRRLIDAENPRKPLSDAKLADLLKSAGVPVARRTVAKYREAMNISASHERVRI
G
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcacggctgcagacatcgctgggacagcatctggtcatgacgccgcagttgcgg
caagccatcaagctgttgcagatgtccagcgcggagctggaagtggagatcgccgaggcg
gtggagagcaatccgctgctggaatgggccgaggacgccgcgcccgcgcccgaggtcaac
ggcgccggcagcgccgagggcgaggccgacgccgcgccgccggccggcgacacgctcgac
aacgttccccagcgcgatggcgacgactggtcctccgagccggcctggagtggcggcagc
ggcggctccttcgacgacgacgacgatatgggcagcgccgccgagcgcgtcgccgaaccc
gatacgctgatcgaccacctgctgtggcagttgcacctgtcgcacctgtcgccgcgcgac
cgcagcatcggcgcggcgctgatcgacgcgctcgacgacgacggctatctgcgcgagccg
ctggccaccatcgccgagacgctgcaaccggacatcgtcgccgacgaggaggaaatcggc
accgtgctgcaccagatccagcgcttcgacccggtcggcatcgccgcgcgcacgctgggc
gaatgcctgaacctgcaactggacgtgttgcccgcggacacgcccgggctggagctggcg
cgcaccatcgccaacggcccgctggagaaactgccgcgcagcggcatcgccggcatcgcc
cacggactcaagcgcccggccgcggcggtggagaccgcggtcgccctgctgcgctcgctg
gacccgcgcccgggcaagcaggtcggcgaactcggcgccgacacctacgtagtgcccgat
tgcgtggtgtggcgccagcgcggcgtctggcatgccgcgctggccggccacgcgcggccc
aaggtcaccatccaccgtggctacgagcggctgatccgccagtgcggcgagagcgacgcc
ggctacctgcgcggccagctgcaggaggcgcgctggctgctgaaaagcctggaagcgcgc
ggcgagaccctgctcaaggtgacccgctgcctgctgcgccagcaggccggcttcctcgag
ttcggcgagcaggcgctgcgcccgctgaccctgcgcgagatcgccggcgaactgggcctg
catgagagcaccatctcccgtgccatcgcccgcaagtacgtgcgcaccccgcgcggcacc
atcccgctgcgcgccttcttcgcctcgggaatcgacaccgatggcggcggcgaagcctcc
agcaccgccattcaggcgatgctccggcgcctgatcgacgccgagaacccgcgcaagccg
ctttctgacgccaagctggccgacctgctgaaaagcgccggcgtgccggtggcgcggcgc
accgtagcgaagtatcgtgaggccatgaacatttccgcatcccacgaacgcgtccgcatc
ggttga
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