Xenopus tropicalis (tropical clawed frog): 100036724
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Entry
100036724 CDS
T01011
Symbol
cacna2d1
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1 preproprotein
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04010
MAPK signaling pathway
xtr04260
Cardiac muscle contraction
xtr04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
100036724 (cacna2d1)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
100036724 (cacna2d1)
04261 Adrenergic signaling in cardiomyocytes
100036724 (cacna2d1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xtr04040
]
100036724 (cacna2d1)
Ion channels [BR:
xtr04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
100036724 (cacna2d1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
100036724
NCBI-ProteinID:
NP_001090738
Xenbase:
XB-GENE-964524
UniProt:
A1L1E0
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Position
3:complement(79491156..79801026)
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AA seq
1076 aa
AA seq
DB search
MAASWLLIFSLTLFQSLLICPSSEEYFPSASTIKQWVEKMQNDLVTLARTASGVDQLSEI
YLKNRHLYTVEANNARQLVQSAATNIEKLLRNRSKALVHLAKKAEEIQESHQWRDQFGTN
SIVYYNAKDDQMDPEKNDSDSASQKIKPVLQDDPVFRRQTSYQHSAVHIPTDIYEGSTIV
LNELNWTAALDEVFKKNREEDETLLWQVFGSATGLARYYPASPWVDKSRTANKIDLYDVR
RRPWYIQGAASPKDMLILVDVSGSVSGLTLKLIRTSVSEMLETLSDDDFVNVAAFNNNAH
DVSCFNHLVQANVRNKKKLKEAVNNITAKGTTDYKTGFKFAFDQLLNHNVSRANCNKIIM
LFTDGGEDKAKETFEAYNKDKTVRVFTFSVGQHNYDKGPIQWMACQNKGFYYEIPSIGAI
RINTQEYLDVLGRPMVLAGDKAKQVQWTNVYLDALELGLVITGTLPVFNLTVDHNGKKNQ
LILGVMGVDVSLEDIKRLTPRFTLCPNGYYFALDPNGYVLLHPNLQPKDLKSQEPVTLDF
LDAELENDHKVEIRTKMIDLESGESTFQTLVKSQDERYIDRGNRTYTWGPVTGTDYSLGL
VLPSYGFYYIKAAFEESMTQAKSKRFKIQDSETLKLEHFEETGYTFLAPREYCTDLKIST
NNTEFLLNFNSFIDRKTPNSPSCNTDMVNRVLLDAGFTFELAQLHWKGQSPKGILARFVA
TDGGITRVYPSFAGEDWPEDPETYEGSFYKRSLDNDNYVFTAPYFNKTRGSRADSGIMVS
KAIEITIDGKLLKPAVVGIKIDVNSWMENFTRDTTKNPQLDCVILDDGGFLLMSNQEDHI
TQIGRFFGEIDPSLMRQLVNISVYAFNKSYDYQSVCDQGDEPVKTAATRSVFVPTIADIL
NLGWWASAAAWSIMQQLFWSITFPRFLEAAEFDDDDFSSDQSKHSCITEQTQYFFENDNR
SFSGYLDCVNCSRIYHVEKILNTNLVFIIIDSTLTCDACDNQALIQAEQRSNGPNPCLLA
QTPRYRKGPDLCFDQDVGEDDTDCGGVSGLTPSLWSMIGIQLVLLWLLSGIRHCAL
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atggctgcttcctggttgctaatctttagtctcacacttttccagtccttgctgatatgc
ccttcatctgaggaatactttccctccgcatcaacgataaaacagtgggtagaaaaaatg
caaaatgaccttgtcacattggcaagaacagcaagtggtgtggaccagctttcagaaatt
tatttgaaaaaccgacatttgtatacagttgaagccaataatgcacggcagcttgtgcaa
agtgcagcgacaaacattgaaaaactactgaggaaccgctccaaagctcttgtgcacctt
gcaaagaaagcagaggagattcaagaatcacatcagtggcgtgatcagtttgggactaat
agcattgtttactacaatgcgaaggatgatcagatggatccagagaagaatgacagtgac
agtgcaagtcaaaaaataaagccagtccttcaagatgaccctgtgtttcggcgacagaca
tcttaccagcattccgctgttcatattcccacggatatttatgagggctctacgatagta
cttaatgagttaaactggactgcggcactcgatgaagtatttaaaaagaatcgagaagaa
gatgaaactcttttgtggcaagtgtttggaagtgcaactggattggccagatattatcca
gcatcaccttgggttgataaaagtagaactgcaaacaaaatcgatctgtatgatgtgcgc
agacggccatggtacatccaaggtgctgcatctccaaaagatatgcttattctggttgat
gtgagcggaagtgttagtgggcttactctgaagttgataagaacatctgtgtctgagatg
ctggaaactctgtcagatgatgattttgttaatgtagctgcttttaacaacaatgcgcat
gatgtcagctgctttaaccaccttgtccaagcaaatgtccgaaataaaaaaaagctaaaa
gaggcagttaataacatcacagccaaggggacaacagactataaaactggcttcaaattt
gcatttgaccagttactcaatcacaatgtatcacgtgcgaactgtaataagataatcatg
ctgttcactgatggaggggaggataaggcaaaagaaacatttgaagcctacaataaggat
aaaactgttcgtgttttcaccttttctgttgggcaacataattatgacaagggacctatt
cagtggatggcttgccaaaataaaggattctactatgagattccatctattggagcaata
agaatcaacacgcaagagtatttagatgtccttggaaggccaatggttctggctggagat
aaagcaaaacaagttcaatggacaaatgtttacttagatgcattggagcttggtcttgtg
atcactggaacacttcctgttttcaatttaacagtagaccacaatggaaagaaaaaccag
ttaatccttggagttatgggagttgacgtttcattagaagacattaaaaggctcactcct
cgttttacactatgccccaatggctattattttgcacttgatcctaacggctatgtactg
cttcatccaaaccttcaaccaaaggacctaaaatctcaggaaccagtaacattggatttt
ttggatgcagaacttgaaaatgatcataaagtagagattcgcactaaaatgatagacctt
gaaagtggagagagcacgttccaaacattagtcaaatctcaagatgagagatacattgac
agagggaacagaacatacacttggggtccagtcactggaacagactacagtctagggtta
gtactaccatcctatggattttactatataaaagctgcatttgaagaaagcatgacacaa
gcaaaatccaaaaggttcaaaatacaggattctgaaactttgaagcttgagcactttgaa
gaaactggatacactttcttagcaccaagggaatactgtactgatctaaaaatttccacc
aataacacagagttcctcttaaattttaattcattcatagatcggaaaacaccaaatagt
ccatcatgtaatacagatatggtgaacagggttctgttggatgcaggatttacctttgaa
cttgctcagcttcactggaaaggacaatcacctaaaggtattcttgcaagatttgttgcc
accgatggtgggattacaagagtgtaccccagttttgctggggaagactggcctgaagat
cctgaaacatatgagggtagcttctataaacgtagtttggataatgacaactatgtcttt
acagctccgtattttaacaaaactcgaggctccagggctgattctggtattatggtgagc
aaggctattgaaataaccattgatggtaaattgcttaagcctgctgttgttggaataaaa
atagatgttaacagctggatggaaaattttacaagggacactacaaaaaacccgcaactg
gattgtgttattctggatgatggtggatttcttttgatgtctaatcaagaggatcatatt
acacagattggcagattctttggagagattgaccctagcctgatgagacagcttgttaac
atttctgtgtatgctttcaataaatcttatgactaccagtctgtgtgtgatcaaggggat
gagccagttaaaacagctgctactcgctcagtgtttgtgcccaccatagcagatatctta
aaccttggatggtgggcttctgctgctgcctggtctattatgcagcagttgttttggagc
atcactttcccacggttcttggaagctgctgaatttgatgatgatgatttttcctctgat
cagtcaaaacacagctgtatcacagagcaaacacaatacttttttgaaaatgacaaccgc
tcctttagtggctatctggactgtgttaattgttcaagaatctaccatgttgaaaagatt
ttgaacaccaatttagtatttataattatcgacagcacgctcacctgtgatgcttgtgat
aaccaagcactaattcaagcagagcagcgttctaatggcccaaatccatgcctcctggct
cagacaccaaggtatagaaaaggaccagacctttgctttgatcaagatgttggggaagat
gacacagactgcggtggagtttctggattaacaccttctctatggtctatgatcggcatc
cagcttgtgctgctatggcttttatctgggattagacattgtgcattatga
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