Xenopus tropicalis (tropical clawed frog): 100144687
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Entry
100144687 CDS
T01011
Symbol
pparg
Name
(RefSeq) peroxisome proliferator-activated receptor gamma isoform X1
KO
K08530
peroxisome proliferator-activated receptor gamma
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03320
PPAR signaling pathway
xtr04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
100144687 (pparg)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
100144687 (pparg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
100144687 (pparg)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
xtr03310
]
100144687 (pparg)
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
100144687 (pparg)
Nuclear receptors [BR:
xtr03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
100144687 (pparg)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
PPARgamma_N
Hormone_recep
Hexapep_loop
DUF3600
Motif
Other DBs
NCBI-GeneID:
100144687
NCBI-ProteinID:
XP_031757160
Xenbase:
XB-GENE-483136
UniProt:
A0A8J1JJG3
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Position
4:153301287..153355531
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AA seq
475 aa
AA seq
DB search
MVDTEMPFWSSLSFGMNAMEALEEHCQPYDIKPFATVDFSSINSHYEDILDEKTFLCRGE
QSPIDYKYDLKLQECQSSIKLEPPSPPYFSDKTQFSKGLEDAPNSFIAIECRVCGDKASG
FHYGVHACEGCKGFFRRTIRLKLIYERCDLNCRIHKKSRNKCQFCRFQKCLSVGMSHNAI
RFGRMPQAEKEKLLAEISSDIDQLNPESADQRVLAKHLYDSYLKSFPLTKAKARAILTGR
ATDKSPVVIYDMNSLMMGEDQIKGQCQAPEQNKEVAIRIFQRCQSRSVEAVREITEFAKN
IPGFVSLDLNDQVTLLKYGVHEIIFTMLASLMNKDGVLIAEGQGFMTREFLKSLRKPFSD
FMEPKFEFAIRFNGLELDDSDLAIFIAVIILSGDRPGLLNVGPIEEIQGSLLQALELQLK
LNHPDSAQLFAKLLQKMTDLRQVVTEHVQLLQLIKKTEADMCLHPLLQEIYKDLY
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggtggacactgagatgccattttggtcgagtttgagctttgggatgaacgccatggag
gccctggaggagcactgccagccctacgacattaagccattcgccaccgtagacttttcc
agcattaactctcactatgaggatattctggatgagaagactttcctctgccgcggcgag
cagtcgcccattgactataagtacgacctgaagctacaggaatgccaaagttccataaag
ctggagcccccgtccccaccttatttttccgacaaaacgcagttcagtaaaggcctggaa
gatgccccaaattccttcatagctattgaatgcagagtttgtggggacaaagcctccggg
ttccactatggcgtccacgcatgtgaaggttgcaaggggtttttcagaagaaccatcagg
ttgaagttaatttatgaaaggtgcgacctgaattgccggattcacaagaaaagccgaaat
aaatgtcagttctgccggttccagaagtgcctgtcggtcggcatgtcccataacgccatc
aggttcgggcggatgccgcaggcggagaaggagaagctattggctgagatctccagcgac
atcgaccagttgaacccggaatcggccgatcagcgcgtcctggccaagcacttgtacgac
tcctacctgaagtccttcccattgaccaaagccaaggcgagggccatcctgaccggcagg
gccaccgacaaatccccggtggttatatacgacatgaactcgctgatgatgggggaagac
cagatcaaggggcagtgccaggcgccggagcagaacaaggaggtggcgattcgcatcttt
cagcgctgccagtcgcgctccgtggaggccgttcgggagatcacggaattcgccaagaac
atcccgggattcgtcagcctcgacctcaacgaccaggtgaccctcctgaaatacggggtg
cacgagatcatcttcaccatgttggcgtcgctcatgaacaaagacggggtgctcattgcc
gaggggcagggcttcatgacccgcgagttcctcaagagcctgcgcaaacccttctccgac
ttcatggagcccaagttcgaattcgccattcgcttcaacggcctcgaactcgacgacagc
gacttggcgatatttatagcagttattatccttagcggagaccggccggggctgctgaac
gtggggcccatagaggagatacaggggagtctgttacaggcgctggagctgcagctcaaa
ctcaaccacccggactcggcgcaactcttcgcgaagctgctgcagaagatgacggacctg
cgccaggtggtgactgagcacgtgcagctgctgcagctcataaagaagacggaggcggac
atgtgcctgcaccccctcttacaggagatctacaaagacttatactga
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