Xenopus tropicalis (tropical clawed frog): 100487270
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Entry
100487270 CDS
T01011
Symbol
setd1a
Name
(RefSeq) histone-lysine N-methyltransferase SETD1A isoform X2
KO
K11422
[histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:
2.1.1.354
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr00310
Lysine degradation
xtr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
100487270 (setd1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xtr03036
]
100487270 (setd1a)
Enzymes [BR:
xtr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
100487270 (setd1a)
Chromosome and associated proteins [BR:
xtr03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
100487270 (setd1a)
HMT complexes
COMPASS/SET1 complex
100487270 (setd1a)
COMPASS/SET1 complex (yeast)
100487270 (setd1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
N-SET
SET
RRM_1
Motif
Other DBs
NCBI-GeneID:
100487270
NCBI-ProteinID:
XP_012809767
Xenbase:
XB-GENE-6046043
UniProt:
F6XS76
LinkDB
All DBs
Position
9:complement(5867031..5888348)
Genome browser
AA seq
1732 aa
AA seq
DB search
MEPEGESHRGAGFQWRSYKLLLDPALHSRRTTQKVYRYDGIHFNISDGAFLPLGDVRDPR
QHRMWSKPREISLPVPKFKFDEFYVGQLPQKEITFAHLNDNVREPFLADMCRKFGDVEEV
EILLHPKTRKHLGLAKVLFSSSKAARDTVTHLHNTSVMGNIIHAELDLRGQQRQKYYDLI
VNGSYNPQTVPTSGRWAQERLQPDMVDSRRRLSSDSSSYLPNNGTPSSQDLGSSYSQYTP
SSSQGTPYTPRSGTPFSQDSAYSSRQGTPSHSSSQDTSGYKSRRQENSSGDSYSRRSGHH
YSPAPSSSTSSSSSQHESSQKRFHRHQNRSSPQSSYRSRHRKPPPPPEEPPLIRFPGTPP
LPPPPPPPPPPDDIHTDRDYRIAHPPPLPPSIPAPSTTILVPPPPPTEGWEPPPPPLPPL
PPVCSPPPSPARSCSPLLDGVSESLPFTQHSSSLDSRIEALLKEQRSKFSFLPSDTEEEE
EATTEAPTQEPVVVEEVPPVHGPYTPPLPASFEDVSAEAILRMAEIGRTANGQDRGMLMQ
EPPFLRDPSSWSRNSLPPQLLSSGEDMEISDEEINMEMPGAAVPPFPLLPHLPGAAGTFQ
SQPIPSPLLPLPPHHPQPPSPFPLLPNTAARGRLGDLAAGSSTPPALDPSSSSSASSAPH
IYDFVNSMELVNRLGNQWGGTSMSFQMQTQMLSRLQQNRQGKNMPFEDPYPPPLLPHPIP
PRLHQPHPPPPLMPEQVFNPTFPPFPAQQPQPLLPPREFTARTARGPSQEPRGPGWAPGG
GVDPHASTIESVLSALIQEMKNTMQRDLNRKMVENVAFRAFDEWWERKEEKAKPFQNVAK
PPPREEDKEKARPKEPGLLSLVDWAKSGGAEGFGFGSGLREALRLPSFKVKRKQPSEDED
SEQKRPRPSTPAEEEQDEREKETESDSRQGGKLPQQEGKRVHKRRRPFHLDSEGEEASEE
SASDKDDEEDELSEKGEDSEEEVSPLTKLSSKIISDDDSDSSSESDSSSSSSSSSSSSSS
ASSSASTPASSDDEEEQEETPDLLSVSEPPRPPSPASPLPELEAAADKKEPLDIPPATEV
KEEQSTEIPEPPLPPPPEPPSKPHAPPSPPLQLLPPPKKRRKTVSFQLLPEEEAEAADSK
PPNHHVPENAAPERPISPLLEPMHLLPTPTDKAPLPSPEAPTAPTAELHSSPKPEPEEPP
LPAKEASPRKQPPERLTVLNLPWDHASLVKPYPPRVRSEDNMEEEAEEDFEKHLEEEEVK
PPPPIEAPTQPEPKSPLISEPSEVERTEFIEDLLFAPVRQILLEHSYASIPAALKQPPRK
QRLSVELEKPNELVHVDLGQAVLEAPEEVVCIGGGLAVDGETGLLDVGDLDISSPRKMEE
ALAKLVHDEPKIKSKRTLAKEAEPGEVTSEEEDEEEMWVTTRQLRSHRNRKAAQRQLPPL
YEIRSEFEQMTILYDIWNTGLDFEDMVFLRDTYERLLQEDHSTDWLNDTHWVHHPITNIA
DPKRRKNRQDGLREHQTGCARSEGYYAISKKDKDKYLKVLLVAAEEQEADTQGTNRVLSE
RRSEQRRLLSAMGSTALLDSDLLKLNQLKFRKKKLRFGRSHIHEWGLFAMEPIAADEMVI
EYVGQNIRQMVADMREKRYSQQGIGSSYLFRMDQDTIIDATKCGNLARFINHCCSPNCYA
KVITIESQKKIVIYSKQPIGINEEITYDYKFPLEDNKIPCLCGTENCRGTLN
NT seq
5199 nt
NT seq
+upstream
nt +downstream
nt
atggagcccgagggcgaaagtcacagaggggcgggcttccagtggaggagctacaagttg
ctgttggatcccgcattgcacagtcgcagaacaacgcagaaagtctatcgctatgatgga
atccacttcaacatatccgatggagcattcctcccactgggggacgtgcgggacccccga
cagcatcgcatgtggagcaaaccacgagagatttccctccctgttcctaaatttaagttt
gatgagttctacgtgggacagcttccccagaaagaaatcacttttgcgcatctcaatgac
aacgtgcgggagcctttcctggccgacatgtgccgcaagtttggggatgtggaggaagtg
gagatactgctgcaccccaaaactaggaaacacctggggctggccaaggtcctcttctcc
agctccaaagcggccagggacacagtcactcacctccacaatacgtctgtgatgggcaac
atcatccacgccgagctggacctcagaggtcagcaaagacagaaatattacgatctgatc
gtgaatggctcgtacaacccccagacagtgccaacgagtgggagatgggcacaggagagg
ctgcagccagacatggtggactccaggcgcaggctttccagcgactcctcctcctacctc
ccaaataacggaaccccttcctctcaggatctcggctcttcctacagccagtataccccc
tcctcctcccaaggcaccccctacactccgcgaagtggcacccccttctctcaggactct
gcctattccagcaggcaggggactcccagtcattcctcttctcaggacacttcgggatat
aaatccaggcgtcaggagaacagttctggggactcctattcccgtcgttctgggcaccac
tattccccagccccgtcttcctctacatcctcctcctcctcccagcacgagagcagccag
aaacgctttcacaggcaccaaaaccggtcctccccgcagtcatcttatcgctctcgccac
cgcaaaccacccccacccccagaagaaccccctctgattcgcttccctgggacgccacct
ctgccaccgccgccacctcctcccccaccccctgatgacattcacacggatcgtgattac
cgaatagcccaccctcctcctcttcctccttccatccctgcaccttcaacgactattctg
gtgcctccacctcctcctactgagggatgggagccaccgcctcctcctctacctcctctg
ccaccggtctgttctcctcctccttccccagctcgttcctgctccccactccttgatggt
gtgtcggagagtctgccattcacacaacacagcagtagcctggactctcgcattgaggct
ctgctgaaggaacagcgctcaaagttctccttcctgccctcagacactgaggaggaagag
gaggcaacaacagaagcacctactcaagagccagtagtagtggaagaggttcctcctgtt
catggtccgtacacccctcccttacccgcaagctttgaggatgtatcggcagaggctatc
ctgagaatggcagagattggcaggacagcaaatggccaggaccggggaatgctgatgcag
gaacctcccttcctaagagaccccagcagttggtcacgtaactccctccctccgcagctg
ctgtcgtctggagaagatatggagatttccgatgaagagattaacatggagatgccgggg
gcagcagttccgcctttcccgcttctgccacatttgcccggagctgccggaacttttcag
tcccagcccattccgtcccctttgctccccctgccgccccatcaccctcagcccccttct
ccattccctctgctgcccaacactgctgccaggggaaggctgggagacctcgctgctggc
tcatccacacctcctgcacttgatccctcttcctcctcttctgcttcgtctgccccccat
atatatgactttgtaaactccatggagttagttaaccgcctgggtaaccaatggggtggc
acctctatgtcctttcagatgcagacgcagatgctgagccgtctgcaacagaataggcag
ggcaaaaatatgcccttcgaggacccttaccctccaccgctcctccctcaccccattccc
ccacggcttcaccagccacaccctccgccaccacttatgccggagcaagtgttcaaccca
acctttccacctttccctgcccaacagccccagccactattgcctccgcgggagttcact
gccagaacagcacgggggcccagccaagagccgaggggtccaggctgggccccaggggga
ggagtggacccacatgcttcaactattgaaagtgtattatcggcgctgatccaggagatg
aagaacacaatgcagagagacctgaatagaaagatggtggaaaatgtggctttccgagca
tttgatgaatggtgggagcgtaaggaagaaaaggccaagccttttcaaaacgtggccaag
ccacctccccgagaagaggacaaggaaaaggcgaggcccaaggagccgggcctactctca
ttggtggactgggccaagagcgggggcgcagaaggctttggttttggaagtgggctcaga
gaagctctcaggctgccatcatttaaggtcaaaaggaaacagccatcagaagatgaggac
agtgagcaaaagaggccccgtccctccactccagcggaggaggaacaggatgaaagagaa
aaggagacagagtctgactccaggcaagggggcaaactcccacagcaggaaggcaagcga
gtgcacaagcgccggcgtcccttccacctggacagtgaaggagaggaggcgtcggaggag
tctgcgtcagataaggacgacgaagaggatgaactcagtgagaagggagaggattccgaa
gaagaggtttctcctctcaccaaactttcctccaagatcatctccgatgacgacagcgac
agctccagtgaatccgacagcagcagttcatcttcctcttcctcatcttcgtcctcatcg
gcttcctcctcggcgtccaccccagcctcttctgatgatgaggaggaacaagaagagacc
ccagatttgctgtctgtttctgaacctcccaggccccctagccctgcctctcctcttcca
gaactggaagctgcagctgataagaaagagccgttggatatacccccagctacagaggtt
aaagaggaacagtccacagaaattccagagccgccacttcctcctccccctgagcctccg
tccaaaccccacgcacctccatcgcctccacttcagctcctccctccccccaagaaaaga
cgtaaaacagtgtcattccagctccttccagaagaagaggccgaggcagcagatagcaaa
ccccccaatcaccacgttccagaaaatgctgctcctgaacgtccgattagccccctgctg
gagcccatgcacctgttgcctactcccaccgacaaggctcctcttccttctcctgaggct
cctactgcaccaactgcagagcttcacagcagccctaaacctgagccggaggagcctcca
cttccagccaaggaagcctctcctcggaaacagcccccagagaggctcacagtactgaac
cttccttgggaccacgcgtcgttggtaaaaccctacccacctcgagtacgcagcgaagac
aacatggaggaagaagcagaagaagactttgaaaagcatcttgaagaggaagaggtcaaa
ccaccgcctccgattgaagcaccaacgcagccggaaccaaagtctcctcttatatcagaa
cccagcgaggtagaacggacagaattcatagaagatctattgtttgcccctgtgcggcag
atactcttggagcatagctatgcgtctatacccgctgcactgaaacagcctcccaggaag
cagcgcctttccgtggagttggagaaacccaatgaacttgtccacgtagatcttggccaa
gcggtgctggaggccccggaggaagttgtatgtatagggggcggtctggcggtagatggg
gagacagggctgctcgacgtgggggatctggatatctcatcccccaggaaaatggaagag
gctctggcaaagctggttcacgacgagccaaagatcaaaagcaaacggacgctggctaaa
gaggcggagccaggggaggtaacctctgaggaggaggacgaggaagaaatgtgggtaacc
actcggcagttgaggtcccacaggaaccggaaggcggcccagcgccagttaccccctctg
tacgagattcgcagcgagtttgagcagatgactatactgtacgatatctggaatacggga
ctggactttgaagacatggtcttcctccgcgacacgtacgagaggctcctgcaggaggac
cacagcacggactggctaaatgacacccactgggtgcatcacccaatcaccaacattgct
gaccccaagcggcggaagaaccggcaggacgggctgcgggagcaccagacaggctgtgcc
aggagtgagggctattacgccattagcaagaaggacaaggacaagtacctgaaagtactt
ctcgtggcagctgaggaacaggaggcagatacccaaggcactaaccgggtgctgtcagag
cggcgttcggagcaaaggcgactgctcagcgctatgggctccactgctttgctggacagt
gatctacttaaactcaaccagctgaagttccgcaagaagaagctgaggttcggccgcagt
cacattcacgagtggggtctctttgccatggaacccatcgctgcagatgaaatggtgata
gaatacgtggggcagaacattcggcagatggtggcggacatgagggagaagagatactcc
cagcaggggatcggcagcagctatctcttccgtatggatcaggacaccatcatcgacgcc
accaaatgtgggaacctggcccgattcatcaaccactgctgctcgcccaactgttacgcc
aaagtcatcaccatcgagtcccaaaagaaaatcgttatctactccaagcagccaatcggc
atcaacgaggagatcacgtacgactacaagttccccctggaggacaacaagatcccctgt
ttgtgtgggacagagaactgccgggggacgttgaattaa
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integrated database retrieval system
