Xenopus tropicalis (tropical clawed frog): 100489340
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Entry
100489340 CDS
T01011
Symbol
hdac4
Name
(RefSeq) histone deacetylase 4 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
100489340 (hdac4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xtr03036
]
100489340 (hdac4)
Enzymes [BR:
xtr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
100489340 (hdac4)
Chromosome and associated proteins [BR:
xtr03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
100489340 (hdac4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
100489340
NCBI-ProteinID:
XP_004917939
Xenbase:
XB-GENE-488767
UniProt:
A0A6I8RRK0
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All DBs
Position
9:complement(60766007..60874785)
Genome browser
AA seq
1066 aa
AA seq
DB search
MSSQTHSDGISGLDQPVDLLTQTRAKHMPSTVDVSAALPLQVAPSALPMDLRLDPQYTIS
AQEPGGREQQLQQELLALKQKQQIQRQLLIAEFQRQHEQLSRQHEAQLHEHIKQQQELLA
MKHQQELLEHQRKLEQHRQEQEMEKQQREQKLLQLKNKEKGKESAVASTEVKMKLQEFVL
NKKKALAHRSLNHCLSSDPRLWKTQHSSLDQSPPPQGVVSASYHQAVLGMYDSKDDFPLR
KTASEPNLKLRSRLKQKVAERRSSPLLRRKDGPGITTLKKRPLDVSDSACNSAPGSGPSS
PNNSSSNISSENGIAGPLGIQTEASLAHRLANRENSVSQLPLYTSPSLPNITLGLPASGS
TNGGSGQENECLPLPALQQRLSLFPAAHLTSYLGPEATSSHNQLLQHMVLLEQPGAQSSL
ISGLGTLPLHSQSLVSPDRVSPTMHKLRQHRPLGRTQSAPLPQNSHALQHLVIQQQHQQF
LEKHKQQFQQQQLHLNKMIPKVNEASRQHESHPEETEEELREHQALHEEPYAERLAEQKE
LSPGSVVHVKQEKEESDDEDNTLELERSKMQSDPDLLFRQQTLLLEQQRIHQLRNYQASL
EAAGLVVPFSGHRPLSRAQSSPASASFPMSVQEAPSKPRFTTGLVYDTLMLKHQCICGNT
NSHPEHAGRIQSIWSRLQETGLRSMCECIRGRKATLEELQTVHSEAHTLLYGTNPLNRQK
LEGSLASLFVRLSCGGVGVDSDTIWNEVHSSGAARLAVGCVVELASKVVSGELKNGFAVV
RPPGHHAEESTPMGFCYFNSVAIAAKVLQQRLNVEKTLIVDWDVHHGNGTQQAFYSDPNV
LYISLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNMAFTGGLEPPMGDAEYLAAFRTVVMP
IAAKFSPDVVLVSAGFDAVEGHPAPLGGYNVSAKCFGYLTKQLMELAGGRVVLALEGGHD
LTAICDASEACVSALLGNKLEPLPESVLQQRPNGNAARSMENVIQIQSEYWPCLHITSST
VAYSLIEAQKCENEEAETVTAMASLSVDVRQERRTEDEPMDEEPPL
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgagctcccagactcattcagatggaatttctggtttggaccaaccagtggacctttta
acacagacccgtgccaaacacatgccaagcactgttgatgtgagtgctgcactgccgctg
caagtggcccccagtgctcttcccatggacctgcggctagacccccaatataccatttca
gcccaggagcccggtgggagagagcaacagctgcagcaagagctcctggccttgaagcag
aagcagcagatccaaaggcagcttttgattgccgagtttcaaagacagcatgagcagctg
tcccgccagcatgaagctcagctccatgagcatataaagcaacaacaagagctcctggct
atgaaacatcagcaggaactgctggaacaccagagaaagctggagcagcaccgacaagag
caggagatggagaaacagcagcgagaacagaagctgttgcagttaaagaataaggaaaaa
ggaaaagaaagcgctgtggcaagcactgaggtcaaaatgaaattacaagagttcgtttta
aataagaagaaagctttagctcacaggagcttaaatcattgcctgtccagtgaccctcgc
ctctggaaaactcagcatagctctcttgaccagagtcctccaccacagggtgttgtgtct
gcctcatatcaccaagctgtccttggaatgtacgactctaaggatgacttcccactgaga
aaaacagcatctgagcctaatctgaagttgcgctcaagactgaaacagaaggttgcagag
aggagaagtagccccctgcttcggaggaaagatggtcctggcatcactaccttgaaaaag
cgtcctttagatgtgtctgattctgcatgtaacagtgctccaggctctggtccaagctct
ccaaacaatagttcaagtaacatcagttcagaaaatggcatagctggtcctttaggaatc
cagacagaggcttcactggctcacagacttgcgaacagggagaactcagtatcgcagctc
cctctatacacatcaccctctttacccaatattacgctaggactgcctgctagtggttct
accaatggtggatcaggacaggaaaacgaatgccttcctctgcctgctctacaacaacgg
ctttccctgtttccagctgctcacctcacttcttaccttggacctgaggccacaagctct
cataatcagctcttacagcatatggtactactagaacagcctggtgcgcagagttcattg
atatcaggtttggggaccctaccacttcactcccagtctcttgtgtcacctgatcgtgta
tcccctaccatgcacaagttacgtcagcaccgtcctttaggtcgtactcaatctgctcca
ctcccacagaattcacatgccctgcaacacctggtcatccaacaacagcaccagcaattc
ctggagaagcacaaacagcaattccagcagcagcagcttcacctaaacaagatgattcct
aaagtgaatgaagcctcgcggcagcatgagagccaccccgaggagactgaggaggagtta
cgcgagcatcaggcactacacgaggaaccttatgcagagcgtttagctgaacaaaaggaa
ctaagccctggcagtgtggtgcatgtaaagcaggagaaagaggaaagcgatgatgaagac
aatacactggaattggaacggagtaaaatgcaatctgacccagacctgctgtttagacag
caaacattattactggagcaacagcgcattcatcaactgagaaactatcaggcttcccta
gaggctgcaggcttagttgtgccattcagtgggcatcggcctctctcaagagcgcagtcc
tcacctgcctctgcgtcatttcccatgtctgtacaggaggcccccagtaaacccaggttc
accacaggccttgtgtatgatacattgatgttaaaacaccagtgcatctgtgggaacaca
aacagccatcctgagcatgctggcagaatacaaagtatttggtcaaggcttcaagaaact
ggtttacgtagcatgtgtgagtgtattcggggcagaaaggcaaccctggaagaattgcag
actgtgcattctgaggctcacactctcttatacggcaccaatcccttgaaccgtcagaag
cttgaaggttccttggcttctctcttcgtccgtctgtcatgtggtggggttggggttgat
agtgacacgatttggaatgaagtgcactcttccggtgctgcccgtcttgcagttggttgt
gttgtagaattggcttccaaggtggtttctggagagctgaagaatggctttgctgtggtt
cgtcctcctggtcatcatgcggaagaaagcacacctatggggttctgttacttcaactct
gtagcaatagctgctaaggttctccagcaacgattaaatgtcgagaagactctgattgtg
gactgggatgttcaccatgggaatggtactcaacaggccttttacagtgacccgaatgtc
ctttatatatcactccatcgttatgatgatggtaacttttttccaggcagtggggctcca
gatgaggttggcacaggccctggcgtgggtttcaatgtgaacatggcttttactggtggt
ctggagcctcccatgggagatgcagaatatctggcagctttcaggacagttgtgatgccc
atagctgctaagttttctccagatgtggttttggtgtctgctggctttgatgcagtagaa
gggcacccagctccactcggtggttacaatgtctcagccaagtgttttgggtacctgaca
aagcaacttatggaattagctggagggcgtgttgttctagctcttgagggaggccatgat
ttaactgctatttgtgatgcctctgaagcctgtgtgtctgccctgctgggaaataagctg
gaaccacttcctgaatctgtattgcagcagagaccaaacggcaatgcagccaggtcaatg
gaaaatgttattcagatccaaagtgaatactggccttgtttgcatataacttcctcgact
gtggcctactcacttattgaagctcaaaagtgtgagaatgaggaggcagagactgtgaca
gcaatggcatccctgtctgtagacgttcgtcaggaacgaaggactgaggatgagccaatg
gatgaagaacctccactgtag
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integrated database retrieval system
